RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 KRTAP2-1Q9BYU5 128 aa6.6□□□□□ -1.35
COL13A1-205ENST00000398978 LOC100996750A0A140TA64 210 aa6.57□□□□□ -1.36
COL13A1-205ENST00000398978 DSTQ03001 7570 aaKnown RBP6.49□□□□□ -1.37
COL13A1-205ENST00000398978 CRCT1Q9UGL9 99 aa6.46□□□□□ -1.37
COL13A1-205ENST00000398978 MT1GP13640 62 aa6.44□□□□□ -1.38
COL13A1-205ENST00000398978 KRTAP19-6Q3LI70 58 aa6.44□□□□□ -1.38
COL13A1-205ENST00000398978 LCE2DQ5TA82 110 aaPredicted RBP6.41□□□□□ -1.38
COL13A1-205ENST00000398978 KRTAP19-4Q3LI73 84 aa6.29□□□□□ -1.4
COL13A1-205ENST00000398978 MT1MQ8N339 61 aa6.28□□□□□ -1.4
COL13A1-205ENST00000398978 KRTAP19-3Q7Z4W3 81 aa6.24□□□□□ -1.41
COL13A1-205ENST00000398978 SPRR2FQ96RM1 72 aa6.12□□□□□ -1.43
COL13A1-205ENST00000398978 MACF1Q9UPN3 7388 aaKnown RBP6.11□□□□□ -1.43
COL13A1-205ENST00000398978 SYNE1Q8NF91 8797 aaKnown RBP6.1□□□□□ -1.43
COL13A1-205ENST00000398978 SYNE2Q8WXH0 6885 aaKnown RBP6□□□□□ -1.45
COL13A1-205ENST00000398978 KRTAP12-4P60329 112 aa6□□□□□ -1.45
COL13A1-205ENST00000398978 LCE5AQ5TCM9 118 aa6□□□□□ -1.45
COL13A1-205ENST00000398978 LCE3BQ5TA77 95 aa5.99□□□□□ -1.45
COL13A1-205ENST00000398978 KRTAP4-9Q9BYQ8 210 aa5.97□□□□□ -1.45
COL13A1-205ENST00000398978 MDN1Q9NU22 5596 aa5.95□□□□□ -1.46
COL13A1-205ENST00000398978 KRTAP6-1Q3LI64 71 aa5.79□□□□□ -1.48
COL13A1-205ENST00000398978 OBSCNQ5VST9 7968 aa5.69□□□□□ -1.5
COL13A1-205ENST00000398978 LCE1AQ5T7P2 110 aa5.59□□□□□ -1.51
COL13A1-205ENST00000398978 MT1AP04731 61 aa5.57□□□□□ -1.52
COL13A1-205ENST00000398978 KRTAP9-2Q9BYQ4 174 aa5.54□□□□□ -1.52
COL13A1-205ENST00000398978 LCE3DQ9BYE3 92 aa5.53□□□□□ -1.52
COL13A1-205ENST00000398978 SPRR2EP22531 72 aa5.5□□□□□ -1.53
COL13A1-205ENST00000398978 SPRR2BP35325 72 aa5.5□□□□□ -1.53
COL13A1-205ENST00000398978 SPRR2AP35326 72 aa5.5□□□□□ -1.53
COL13A1-205ENST00000398978 KRTAP9-7A8MTY7 169 aa5.47□□□□□ -1.53
COL13A1-205ENST00000398978 KRTAP5-5Q701N2 237 aaPredicted RBP5.45□□□□□ -1.54
COL13A1-205ENST00000398978 LCE3EQ5T5B0 92 aa5.44□□□□□ -1.54
COL13A1-205ENST00000398978 KRTAP5-9P26371 169 aa5.4□□□□□ -1.54
COL13A1-205ENST00000398978 PRM1P04553 51 aa5.34□□□□□ -1.55
COL13A1-205ENST00000398978 KRTAP9-4Q9BYQ2 154 aa5.26□□□□□ -1.57
COL13A1-205ENST00000398978 SPRR2DP22532 72 aa5.23□□□□□ -1.57
COL13A1-205ENST00000398978 KRTAP6-2Q3LI66 62 aa5.19□□□□□ -1.58
COL13A1-205ENST00000398978 KRTAP6-3Q3LI67 103 aa5.08□□□□□ -1.6
COL13A1-205ENST00000398978 MT3P25713 68 aa5□□□□□ -1.61
COL13A1-205ENST00000398978 LCE1EQ5T753 118 aa4.98□□□□□ -1.61
COL13A1-205ENST00000398978 KRTAP9-6A0A140TA67 174 aa4.96□□□□□ -1.62
COL13A1-205ENST00000398978 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.93□□□□□ -1.62
COL13A1-205ENST00000398978 KRTAP2-2Q9BYT5 123 aa4.92□□□□□ -1.62
COL13A1-205ENST00000398978 KRTAP4-6Q9BYQ5 205 aa4.78□□□□□ -1.64
COL13A1-205ENST00000398978 MT4P47944 62 aa4.76□□□□□ -1.65
COL13A1-205ENST00000398978 LCE1DQ5T752 114 aa4.72□□□□□ -1.65
COL13A1-205ENST00000398978 KRTAP5-4Q6L8H1 288 aa4.69□□□□□ -1.66
COL13A1-205ENST00000398978 NEBP20929 6669 aa4.65□□□□□ -1.66
COL13A1-205ENST00000398978 HMCN1Q96RW7 5635 aa4.52□□□□□ -1.69
COL13A1-205ENST00000398978 KRTAP20-2Q3LI61 65 aa4.52□□□□□ -1.69
COL13A1-205ENST00000398978 MUC5ACP98088 5654 aa4.4□□□□□ -1.71
COL13A1-205ENST00000398978 KRTAP5-2Q701N4 177 aa4.4□□□□□ -1.71
COL13A1-205ENST00000398978 MUC19Q7Z5P9 8384 aa4.4□□□□□ -1.71
COL13A1-205ENST00000398978 LCE1FQ5T754 118 aa4.37□□□□□ -1.71
COL13A1-205ENST00000398978 LCE4AQ5TA78 99 aa4.33□□□□□ -1.72
COL13A1-205ENST00000398978 LCE1BQ5T7P3 118 aa4.25□□□□□ -1.73
COL13A1-205ENST00000398978 KRTAP5-3Q6L8H2 238 aa4.24□□□□□ -1.73
COL13A1-205ENST00000398978 KRTAP20-1Q3LI63 56 aa4.13□□□□□ -1.75
COL13A1-205ENST00000398978 KRTAP4-11Q9BYQ6 195 aa4.1□□□□□ -1.75
COL13A1-205ENST00000398978 KRTAP5-10Q6L8G5 202 aa4.01□□□□□ -1.77
COL13A1-205ENST00000398978 KRTAP4-2Q9BYR5 136 aa3.9□□□□□ -1.79
COL13A1-205ENST00000398978 KRTAP5-1Q6L8H4 278 aa3.87□□□□□ -1.79
COL13A1-205ENST00000398978 LCE1CQ5T751 118 aa3.78□□□□□ -1.8
COL13A1-205ENST00000398978 KRTAP21-2Q3LI59 83 aa3.67□□□□□ -1.82
COL13A1-205ENST00000398978 KRTAP4-4Q9BYR3 166 aa3.61□□□□□ -1.83
COL13A1-205ENST00000398978 KRTAP5-8O75690 187 aa3.53□□□□□ -1.84
COL13A1-205ENST00000398978 AHNAK2Q8IVF2 5795 aa3.52□□□□□ -1.85
COL13A1-205ENST00000398978 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.5□□□□□ -1.85
COL13A1-205ENST00000398978 MUC5BQ9HC84 5762 aaPredicted RBP3.47□□□□□ -1.85
COL13A1-205ENST00000398978 KRTAP4-12Q9BQ66 201 aa3.37□□□□□ -1.87
COL13A1-205ENST00000398978 KRTAP9-9Q9BYP9 154 aa3.34□□□□□ -1.88
COL13A1-205ENST00000398978 KRTAP5-7Q6L8G8 165 aa3.31□□□□□ -1.88
COL13A1-205ENST00000398978 KRTAP21-1Q3LI58 79 aa3.22□□□□□ -1.89
COL13A1-205ENST00000398978 KRTAP5-11Q6L8G4 156 aa3.22□□□□□ -1.89
COL13A1-205ENST00000398978 GPR98Q8WXG9 6306 aa2.94□□□□□ -1.94
COL13A1-205ENST00000398978 PHGR1C9JFL3 82 aa2.82□□□□□ -1.96
COL13A1-205ENST00000398978 AHNAKQ09666 5890 aaKnown RBP2.54□□□□□ -2
COL13A1-205ENST00000398978 MUC16Q8WXI7 14507 aa1.95□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 13.4 ms