RNA–Protein interactions for RNA: ENST00000398193.8

RGPD1-201, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-201ENST00000398193 SPRR2FQ96RM1 72 aa2.46□□□□□ -2.02
RGPD1-201ENST00000398193 FCGBPQ9Y6R7 5405 aaPredicted RBP2.45□□□□□ -2.02
RGPD1-201ENST00000398193 KRTAP9-6A8MVA2 160 aa2.43□□□□□ -2.02
RGPD1-201ENST00000398193 KRTAP2-3P0C7H8 128 aa2.43□□□□□ -2.02
RGPD1-201ENST00000398193 KRTAP2-4Q9BYR9 128 aa2.43□□□□□ -2.02
RGPD1-201ENST00000398193 KRTAP2-1Q9BYU5 128 aa2.43□□□□□ -2.02
RGPD1-201ENST00000398193 KRTAP6-3Q3LI67 103 aa2.43□□□□□ -2.02
RGPD1-201ENST00000398193 LCE1AQ5T7P2 110 aa2.43□□□□□ -2.02
RGPD1-201ENST00000398193 INE1O15225 51 aa2.42□□□□□ -2.02
RGPD1-201ENST00000398193 KRTAP4-7Q9BYR0 210 aa2.41□□□□□ -2.02
RGPD1-201ENST00000398193 KRTAP9-6A0A140TA67 174 aa2.37□□□□□ -2.03
RGPD1-201ENST00000398193 KMT2DO14686 5537 aa2.37□□□□□ -2.03
RGPD1-201ENST00000398193 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.35□□□□□ -2.03
RGPD1-201ENST00000398193 SPRR2EP22531 72 aa2.35□□□□□ -2.03
RGPD1-201ENST00000398193 SPRR2BP35325 72 aa2.35□□□□□ -2.03
RGPD1-201ENST00000398193 SPRR2AP35326 72 aa2.35□□□□□ -2.03
RGPD1-201ENST00000398193 KRTAP4-3Q9BYR4 195 aa2.32□□□□□ -2.04
RGPD1-201ENST00000398193 KRTAP5-5Q701N2 237 aaPredicted RBP2.28□□□□□ -2.04
RGPD1-201ENST00000398193 LOC100996750A0A140TA64 210 aa2.28□□□□□ -2.04
RGPD1-201ENST00000398193 SPRR2DP22532 72 aa2.28□□□□□ -2.05
RGPD1-201ENST00000398193 MT1AP04731 61 aa2.27□□□□□ -2.05
RGPD1-201ENST00000398193 MACF1Q9UPN3 7388 aaKnown RBP2.26□□□□□ -2.05
RGPD1-201ENST00000398193 NEBP20929 6669 aa2.18□□□□□ -2.06
RGPD1-201ENST00000398193 SYNE2Q8WXH0 6885 aaKnown RBP2.18□□□□□ -2.06
RGPD1-201ENST00000398193 LCE3BQ5TA77 95 aa2.17□□□□□ -2.06
RGPD1-201ENST00000398193 MUC12Q9UKN1 5478 aa2.17□□□□□ -2.06
RGPD1-201ENST00000398193 KRTAP6-1Q3LI64 71 aa2.16□□□□□ -2.06
RGPD1-201ENST00000398193 KRTAP4-6Q9BYQ5 205 aa2.16□□□□□ -2.06
RGPD1-201ENST00000398193 KRTAP9-7A8MTY7 169 aa2.16□□□□□ -2.06
RGPD1-201ENST00000398193 FSIP2Q5CZC0 6907 aa2.16□□□□□ -2.06
RGPD1-201ENST00000398193 KRTAP9-4Q9BYQ2 154 aa2.15□□□□□ -2.07
RGPD1-201ENST00000398193 KRTAP5-4Q6L8H1 288 aa2.14□□□□□ -2.07
RGPD1-201ENST00000398193 LCE4AQ5TA78 99 aa2.11□□□□□ -2.07
RGPD1-201ENST00000398193 KRTAP12-4P60329 112 aa2.07□□□□□ -2.08
RGPD1-201ENST00000398193 MT3P25713 68 aa2.05□□□□□ -2.08
RGPD1-201ENST00000398193 KRTAP2-2Q9BYT5 123 aa2.04□□□□□ -2.08
RGPD1-201ENST00000398193 MDN1Q9NU22 5596 aa2.03□□□□□ -2.08
RGPD1-201ENST00000398193 LCE3DQ9BYE3 92 aa2.01□□□□□ -2.09
RGPD1-201ENST00000398193 KRTAP20-1Q3LI63 56 aa1.99□□□□□ -2.09
RGPD1-201ENST00000398193 LCE3EQ5T5B0 92 aa1.99□□□□□ -2.09
RGPD1-201ENST00000398193 KRTAP5-2Q701N4 177 aa1.97□□□□□ -2.09
RGPD1-201ENST00000398193 KRTAP6-2Q3LI66 62 aa1.97□□□□□ -2.09
RGPD1-201ENST00000398193 KRTAP20-2Q3LI61 65 aa1.94□□□□□ -2.1
RGPD1-201ENST00000398193 KRTAP4-9Q9BYQ8 210 aa1.92□□□□□ -2.1
RGPD1-201ENST00000398193 KRTAP5-3Q6L8H2 238 aa1.89□□□□□ -2.11
RGPD1-201ENST00000398193 MT4P47944 62 aa1.88□□□□□ -2.11
RGPD1-201ENST00000398193 LCE1DQ5T752 114 aa1.87□□□□□ -2.11
RGPD1-201ENST00000398193 KRTAP4-12Q9BQ66 201 aa1.84□□□□□ -2.11
RGPD1-201ENST00000398193 LCE1EQ5T753 118 aa1.81□□□□□ -2.12
RGPD1-201ENST00000398193 KRTAP9-9Q9BYP9 154 aa1.78□□□□□ -2.12
RGPD1-201ENST00000398193 SYNE1Q8NF91 8797 aaKnown RBP1.76□□□□□ -2.13
RGPD1-201ENST00000398193 DSTQ03001 7570 aaKnown RBP1.75□□□□□ -2.13
RGPD1-201ENST00000398193 KRTAP4-2Q9BYR5 136 aa1.75□□□□□ -2.13
RGPD1-201ENST00000398193 PRM1P04553 51 aa1.74□□□□□ -2.13
RGPD1-201ENST00000398193 HMCN1Q96RW7 5635 aa1.72□□□□□ -2.13
RGPD1-201ENST00000398193 KRTAP5-10Q6L8G5 202 aa1.68□□□□□ -2.14
RGPD1-201ENST00000398193 KRTAP5-7Q6L8G8 165 aa1.67□□□□□ -2.14
RGPD1-201ENST00000398193 KRTAP5-8O75690 187 aa1.66□□□□□ -2.14
RGPD1-201ENST00000398193 LCE1CQ5T751 118 aa1.66□□□□□ -2.14
RGPD1-201ENST00000398193 LCE1BQ5T7P3 118 aa1.66□□□□□ -2.14
RGPD1-201ENST00000398193 KRTAP4-11Q9BYQ6 195 aa1.64□□□□□ -2.15
RGPD1-201ENST00000398193 KRTAP5-1Q6L8H4 278 aa1.63□□□□□ -2.15
RGPD1-201ENST00000398193 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.61□□□□□ -2.15
RGPD1-201ENST00000398193 AHNAK2Q8IVF2 5795 aa1.58□□□□□ -2.16
RGPD1-201ENST00000398193 MUC5ACP98088 5654 aa1.51□□□□□ -2.17
RGPD1-201ENST00000398193 MUC5BQ9HC84 5762 aaPredicted RBP1.46□□□□□ -2.18
RGPD1-201ENST00000398193 KRTAP5-11Q6L8G4 156 aa1.46□□□□□ -2.18
RGPD1-201ENST00000398193 OBSCNQ5VST9 7968 aa1.45□□□□□ -2.18
RGPD1-201ENST00000398193 KRTAP21-2Q3LI59 83 aa1.44□□□□□ -2.18
RGPD1-201ENST00000398193 GPR98Q8WXG9 6306 aa1.37□□□□□ -2.19
RGPD1-201ENST00000398193 LCE1FQ5T754 118 aa1.35□□□□□ -2.19
RGPD1-201ENST00000398193 PHGR1C9JFL3 82 aa1.23□□□□□ -2.21
RGPD1-201ENST00000398193 AHNAKQ09666 5890 aaKnown RBP1.19□□□□□ -2.22
RGPD1-201ENST00000398193 KRTAP21-1Q3LI58 79 aa1.16□□□□□ -2.22
RGPD1-201ENST00000398193 KRTAP4-4Q9BYR3 166 aa1.15□□□□□ -2.23
RGPD1-201ENST00000398193 MUC19Q7Z5P9 8384 aa0.91□□□□□ -2.26
RGPD1-201ENST00000398193 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 117.8 ms