RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 PP632Q6XCG6 107 aa5.9□□□□□ -1.46
APTR-201ENST00000398043 V9GYY9 64 aa5.89□□□□□ -1.47
APTR-201ENST00000398043 PSPHP1O15172 72 aa5.87□□□□□ -1.47
APTR-201ENST00000398043 KRTAP12-3P60328 96 aa5.79□□□□□ -1.48
APTR-201ENST00000398043 KRTAP4-3Q9BYR4 195 aa5.78□□□□□ -1.48
APTR-201ENST00000398043 KRTAP25-1Q3LHN0 102 aa5.77□□□□□ -1.49
APTR-201ENST00000398043 K7ERS5 55 aa5.74□□□□□ -1.49
APTR-201ENST00000398043 KRTAP4-9Q9BYQ8 210 aa5.72□□□□□ -1.49
APTR-201ENST00000398043 KRTAP4-7Q9BYR0 210 aa5.69□□□□□ -1.5
APTR-201ENST00000398043 RPS28P62857 69 aaKnown RBP5.68□□□□□ -1.5
APTR-201ENST00000398043 LCE4AQ5TA78 99 aa5.65□□□□□ -1.5
APTR-201ENST00000398043 A6NED7 52 aa5.64□□□□□ -1.51
APTR-201ENST00000398043 PCP4P48539 62 aa5.64□□□□□ -1.51
APTR-201ENST00000398043 LCE1DQ5T752 114 aa5.63□□□□□ -1.51
APTR-201ENST00000398043 KRTAP5-4Q6L8H1 288 aa5.63□□□□□ -1.51
APTR-201ENST00000398043 KRTAP23-1A1A580 65 aa5.61□□□□□ -1.51
APTR-201ENST00000398043 MT4P47944 62 aa5.54□□□□□ -1.52
APTR-201ENST00000398043 KRTAP19-4Q3LI73 84 aa5.49□□□□□ -1.53
APTR-201ENST00000398043 CDC42SE1Q9NRR8 79 aa5.49□□□□□ -1.53
APTR-201ENST00000398043 HMCN1Q96RW7 5635 aa5.46□□□□□ -1.53
APTR-201ENST00000398043 KRTAP5-5Q701N2 237 aaPredicted RBP5.46□□□□□ -1.54
APTR-201ENST00000398043 KRTAP15-1Q3LI76 137 aa5.45□□□□□ -1.54
APTR-201ENST00000398043 KRTAP4-6Q9BYQ5 205 aa5.45□□□□□ -1.54
APTR-201ENST00000398043 ROMO1P60602 79 aa5.43□□□□□ -1.54
APTR-201ENST00000398043 LOC100996750A0A140TA64 210 aa5.38□□□□□ -1.55
APTR-201ENST00000398043 LCE3CQ5T5A8 94 aa5.37□□□□□ -1.55
APTR-201ENST00000398043 GPR98Q8WXG9 6306 aa5.36□□□□□ -1.55
APTR-201ENST00000398043 KRTAP20-2Q3LI61 65 aa5.26□□□□□ -1.57
APTR-201ENST00000398043 SPRR5A0A1B0GTR4 108 aa5.25□□□□□ -1.57
APTR-201ENST00000398043 AHNAK2Q8IVF2 5795 aa5.22□□□□□ -1.57
APTR-201ENST00000398043 KRTAP5-10Q6L8G5 202 aa5.2□□□□□ -1.58
APTR-201ENST00000398043 KRTAP12-4P60329 112 aa5.19□□□□□ -1.58
APTR-201ENST00000398043 KRTAP5-3Q6L8H2 238 aa5.14□□□□□ -1.59
APTR-201ENST00000398043 KRTAP9-6A8MVA2 160 aa5.11□□□□□ -1.59
APTR-201ENST00000398043 SYNE1Q8NF91 8797 aaKnown RBP5.1□□□□□ -1.59
APTR-201ENST00000398043 MT1AP04731 61 aa5.08□□□□□ -1.6
APTR-201ENST00000398043 KRTAP6-1Q3LI64 71 aa5.05□□□□□ -1.6
APTR-201ENST00000398043 KRTAP5-7Q6L8G8 165 aa4.98□□□□□ -1.61
APTR-201ENST00000398043 KRTAP5-2Q701N4 177 aa4.95□□□□□ -1.62
APTR-201ENST00000398043 BRK1Q8WUW1 75 aa4.92□□□□□ -1.62
APTR-201ENST00000398043 KRTAP9-4Q9BYQ2 154 aa4.9□□□□□ -1.63
APTR-201ENST00000398043 KRTAP6-2Q3LI66 62 aa4.78□□□□□ -1.64
APTR-201ENST00000398043 KRTAP4-11Q9BYQ6 195 aa4.77□□□□□ -1.65
APTR-201ENST00000398043 KRTAP5-8O75690 187 aa4.64□□□□□ -1.67
APTR-201ENST00000398043 PMAIP1Q13794 54 aa4.63□□□□□ -1.67
APTR-201ENST00000398043 MT3P25713 68 aa4.61□□□□□ -1.67
APTR-201ENST00000398043 OBSCNQ5VST9 7968 aa4.5□□□□□ -1.69
APTR-201ENST00000398043 PRAC1Q96KF2 57 aa4.49□□□□□ -1.69
APTR-201ENST00000398043 KRTAP5-1Q6L8H4 278 aa4.42□□□□□ -1.7
APTR-201ENST00000398043 PRO0628Q9UI54 55 aa4.35□□□□□ -1.71
APTR-201ENST00000398043 KRTAP9-9Q9BYP9 154 aa4.31□□□□□ -1.72
APTR-201ENST00000398043 LCE1EQ5T753 118 aa4.25□□□□□ -1.73
APTR-201ENST00000398043 MUC5ACP98088 5654 aa4.25□□□□□ -1.73
APTR-201ENST00000398043 MUC5BQ9HC84 5762 aaPredicted RBP4.25□□□□□ -1.73
APTR-201ENST00000398043 AHNAKQ09666 5890 aaKnown RBP4.18□□□□□ -1.74
APTR-201ENST00000398043 KTN1-AS1Q86SY8 53 aa4.15□□□□□ -1.75
APTR-201ENST00000398043 KRTAP4-2Q9BYR5 136 aa4.03□□□□□ -1.76
APTR-201ENST00000398043 LCE1CQ5T751 118 aa3.94□□□□□ -1.78
APTR-201ENST00000398043 LCE1BQ5T7P3 118 aa3.94□□□□□ -1.78
APTR-201ENST00000398043 SVIPQ8NHG7 77 aa3.9□□□□□ -1.79
APTR-201ENST00000398043 LCE3DQ9BYE3 92 aa3.86□□□□□ -1.79
APTR-201ENST00000398043 LUZP6Q538Z0 58 aa3.69□□□□□ -1.82
APTR-201ENST00000398043 LCE3EQ5T5B0 92 aa3.65□□□□□ -1.83
APTR-201ENST00000398043 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.63□□□□□ -1.83
APTR-201ENST00000398043 KRTAP5-11Q6L8G4 156 aa3.57□□□□□ -1.84
APTR-201ENST00000398043 KRTAP4-12Q9BQ66 201 aa3.55□□□□□ -1.84
APTR-201ENST00000398043 LCE1FQ5T754 118 aa3.43□□□□□ -1.86
APTR-201ENST00000398043 H3BS24 57 aa3.34□□□□□ -1.87
APTR-201ENST00000398043 KRTAP21-2Q3LI59 83 aa3.34□□□□□ -1.87
APTR-201ENST00000398043 PHGR1C9JFL3 82 aa3.08□□□□□ -1.92
APTR-201ENST00000398043 NDUFAF8A1L188 74 aa3.03□□□□□ -1.92
APTR-201ENST00000398043 KRTAP4-4Q9BYR3 166 aa3□□□□□ -1.93
APTR-201ENST00000398043 A0A0A0MQY5 61 aa2.85□□□□□ -1.95
APTR-201ENST00000398043 PRM1P04553 51 aa2.78□□□□□ -1.96
APTR-201ENST00000398043 MUC19Q7Z5P9 8384 aa2.75□□□□□ -1.97
APTR-201ENST00000398043 INE1O15225 51 aa2.44□□□□□ -2.02
APTR-201ENST00000398043 KRTAP21-1Q3LI58 79 aa2.26□□□□□ -2.05
APTR-201ENST00000398043 MUC16Q8WXI7 14507 aa2.02□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 35.8 ms