RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 KRTAP12-4P60329 112 aa5.24□□□□□ -1.57
LSS-202ENST00000397728 SYNE1Q8NF91 8797 aaKnown RBP5.21□□□□□ -1.58
LSS-202ENST00000397728 LCE3BQ5TA77 95 aa5.21□□□□□ -1.58
LSS-202ENST00000397728 MT1EP04732 61 aa5.21□□□□□ -1.58
LSS-202ENST00000397728 MT1LQ93083 61 aa5.18□□□□□ -1.58
LSS-202ENST00000397728 KRTAP4-7Q9BYR0 210 aa5.16□□□□□ -1.58
LSS-202ENST00000397728 KRTAP9-7A8MTY7 169 aa5.04□□□□□ -1.6
LSS-202ENST00000397728 MT1MQ8N339 61 aa5.04□□□□□ -1.6
LSS-202ENST00000397728 SYNE2Q8WXH0 6885 aaKnown RBP5.03□□□□□ -1.6
LSS-202ENST00000397728 MT4P47944 62 aa4.96□□□□□ -1.62
LSS-202ENST00000397728 KRTAP4-3Q9BYR4 195 aa4.94□□□□□ -1.62
LSS-202ENST00000397728 KRTAP19-7Q3SYF9 63 aa4.93□□□□□ -1.62
LSS-202ENST00000397728 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.92□□□□□ -1.62
LSS-202ENST00000397728 KRTAP6-3Q3LI67 103 aa4.87□□□□□ -1.63
LSS-202ENST00000397728 USH2AO75445 5202 aa4.87□□□□□ -1.63
LSS-202ENST00000397728 LOC100996750A0A140TA64 210 aa4.84□□□□□ -1.63
LSS-202ENST00000397728 KRTAP20-1Q3LI63 56 aa4.81□□□□□ -1.64
LSS-202ENST00000397728 LCE3DQ9BYE3 92 aa4.78□□□□□ -1.64
LSS-202ENST00000397728 LCE1AQ5T7P2 110 aa4.71□□□□□ -1.65
LSS-202ENST00000397728 MT3P25713 68 aa4.7□□□□□ -1.66
LSS-202ENST00000397728 LCE3EQ5T5B0 92 aa4.66□□□□□ -1.66
LSS-202ENST00000397728 KRTAP2-3P0C7H8 128 aa4.66□□□□□ -1.66
LSS-202ENST00000397728 KRTAP2-4Q9BYR9 128 aa4.66□□□□□ -1.66
LSS-202ENST00000397728 OBSCNQ5VST9 7968 aa4.64□□□□□ -1.67
LSS-202ENST00000397728 KMT2DO14686 5537 aa4.63□□□□□ -1.67
LSS-202ENST00000397728 DSTQ03001 7570 aaKnown RBP4.63□□□□□ -1.67
LSS-202ENST00000397728 FCGBPQ9Y6R7 5405 aaPredicted RBP4.62□□□□□ -1.67
LSS-202ENST00000397728 MACF1Q9UPN3 7388 aaKnown RBP4.6□□□□□ -1.67
LSS-202ENST00000397728 LCE5AQ5TCM9 118 aa4.58□□□□□ -1.68
LSS-202ENST00000397728 MT1AP04731 61 aa4.57□□□□□ -1.68
LSS-202ENST00000397728 KRTAP2-2Q9BYT5 123 aa4.53□□□□□ -1.68
LSS-202ENST00000397728 KRTAP2-1Q9BYU5 128 aa4.53□□□□□ -1.68
LSS-202ENST00000397728 SSPOA2VEC9 5147 aa4.52□□□□□ -1.69
LSS-202ENST00000397728 KRTAP4-9Q9BYQ8 210 aa4.5□□□□□ -1.69
LSS-202ENST00000397728 LCE1DQ5T752 114 aa4.49□□□□□ -1.69
LSS-202ENST00000397728 LCE1BQ5T7P3 118 aa4.45□□□□□ -1.7
LSS-202ENST00000397728 LCE4AQ5TA78 99 aa4.38□□□□□ -1.71
LSS-202ENST00000397728 MUC12Q9UKN1 5478 aa4.37□□□□□ -1.71
LSS-202ENST00000397728 KRTAP6-1Q3LI64 71 aa4.36□□□□□ -1.71
LSS-202ENST00000397728 KRTAP9-6A8MVA2 160 aa4.34□□□□□ -1.71
LSS-202ENST00000397728 NEBP20929 6669 aa4.32□□□□□ -1.72
LSS-202ENST00000397728 KRTAP6-2Q3LI66 62 aa4.29□□□□□ -1.72
LSS-202ENST00000397728 KRTAP5-9P26371 169 aa4.29□□□□□ -1.72
LSS-202ENST00000397728 MDN1Q9NU22 5596 aa4.27□□□□□ -1.73
LSS-202ENST00000397728 KRTAP9-4Q9BYQ2 154 aa4.23□□□□□ -1.73
LSS-202ENST00000397728 PRM1P04553 51 aa4.19□□□□□ -1.74
LSS-202ENST00000397728 KRTAP4-6Q9BYQ5 205 aa3.95□□□□□ -1.78
LSS-202ENST00000397728 GPR98Q8WXG9 6306 aa3.91□□□□□ -1.78
LSS-202ENST00000397728 KRTAP20-2Q3LI61 65 aa3.82□□□□□ -1.8
LSS-202ENST00000397728 KRTAP9-9Q9BYP9 154 aa3.75□□□□□ -1.81
LSS-202ENST00000397728 LCE1CQ5T751 118 aa3.72□□□□□ -1.81
LSS-202ENST00000397728 LCE1EQ5T753 118 aa3.72□□□□□ -1.81
LSS-202ENST00000397728 LCE1FQ5T754 118 aa3.72□□□□□ -1.81
LSS-202ENST00000397728 MUC19Q7Z5P9 8384 aa3.63□□□□□ -1.83
LSS-202ENST00000397728 KRTAP5-4Q6L8H1 288 aa3.57□□□□□ -1.84
LSS-202ENST00000397728 KRTAP4-11Q9BYQ6 195 aa3.48□□□□□ -1.85
LSS-202ENST00000397728 KRTAP5-5Q701N2 237 aaPredicted RBP3.46□□□□□ -1.86
LSS-202ENST00000397728 MUC5ACP98088 5654 aa3.37□□□□□ -1.87
LSS-202ENST00000397728 KRTAP5-3Q6L8H2 238 aa3.33□□□□□ -1.88
LSS-202ENST00000397728 KRTAP4-12Q9BQ66 201 aa3.28□□□□□ -1.88
LSS-202ENST00000397728 KRTAP4-2Q9BYR5 136 aa3.28□□□□□ -1.88
LSS-202ENST00000397728 HMCN1Q96RW7 5635 aa3.27□□□□□ -1.89
LSS-202ENST00000397728 AHNAK2Q8IVF2 5795 aa3.21□□□□□ -1.9
LSS-202ENST00000397728 KRTAP4-4Q9BYR3 166 aa3.17□□□□□ -1.9
LSS-202ENST00000397728 KRTAP5-8O75690 187 aa3.03□□□□□ -1.92
LSS-202ENST00000397728 KRTAP5-2Q701N4 177 aa2.93□□□□□ -1.94
LSS-202ENST00000397728 AHNAKQ09666 5890 aaKnown RBP2.74□□□□□ -1.97
LSS-202ENST00000397728 KRTAP5-1Q6L8H4 278 aa2.63□□□□□ -1.99
LSS-202ENST00000397728 MUC5BQ9HC84 5762 aaPredicted RBP2.62□□□□□ -1.99
LSS-202ENST00000397728 KRTAP5-10Q6L8G5 202 aa2.59□□□□□ -2
LSS-202ENST00000397728 PHGR1C9JFL3 82 aa2.51□□□□□ -2.01
LSS-202ENST00000397728 KRTAP5-11Q6L8G4 156 aa2.5□□□□□ -2.01
LSS-202ENST00000397728 KRTAP5-7Q6L8G8 165 aa2.45□□□□□ -2.02
LSS-202ENST00000397728 KRTAP21-2Q3LI59 83 aa2.35□□□□□ -2.03
LSS-202ENST00000397728 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.23□□□□□ -2.05
LSS-202ENST00000397728 KRTAP21-1Q3LI58 79 aa2.12□□□□□ -2.07
LSS-202ENST00000397728 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 11.7 ms