RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 KRTAP2-1Q9BYU5 128 aa8.02□□□□□ -1.13
PABPN1-202ENST00000397276 KRTAP19-4Q3LI73 84 aa7.99□□□□□ -1.13
PABPN1-202ENST00000397276 LCE2DQ5TA82 110 aaPredicted RBP7.99□□□□□ -1.13
PABPN1-202ENST00000397276 KRTAP4-3Q9BYR4 195 aa7.97□□□□□ -1.13
PABPN1-202ENST00000397276 LOC100996750A0A140TA64 210 aa7.88□□□□□ -1.15
PABPN1-202ENST00000397276 KRTAP19-3Q7Z4W3 81 aa7.82□□□□□ -1.16
PABPN1-202ENST00000397276 MT1GP13640 62 aa7.8□□□□□ -1.16
PABPN1-202ENST00000397276 MACF1Q9UPN3 7388 aaKnown RBP7.8□□□□□ -1.16
PABPN1-202ENST00000397276 DSTQ03001 7570 aaKnown RBP7.8□□□□□ -1.16
PABPN1-202ENST00000397276 MT1MQ8N339 61 aa7.79□□□□□ -1.16
PABPN1-202ENST00000397276 SPRR2FQ96RM1 72 aa7.76□□□□□ -1.17
PABPN1-202ENST00000397276 CRCT1Q9UGL9 99 aa7.73□□□□□ -1.17
PABPN1-202ENST00000397276 SYNE2Q8WXH0 6885 aaKnown RBP7.61□□□□□ -1.19
PABPN1-202ENST00000397276 LCE5AQ5TCM9 118 aa7.58□□□□□ -1.2
PABPN1-202ENST00000397276 MDN1Q9NU22 5596 aa7.5□□□□□ -1.21
PABPN1-202ENST00000397276 KRTAP9-2Q9BYQ4 174 aa7.49□□□□□ -1.21
PABPN1-202ENST00000397276 KRTAP12-4P60329 112 aa7.29□□□□□ -1.24
PABPN1-202ENST00000397276 LCE1AQ5T7P2 110 aa7.2□□□□□ -1.26
PABPN1-202ENST00000397276 SYNE1Q8NF91 8797 aaKnown RBP7.17□□□□□ -1.26
PABPN1-202ENST00000397276 LCE3BQ5TA77 95 aa7.16□□□□□ -1.26
PABPN1-202ENST00000397276 KRTAP5-9P26371 169 aa7.15□□□□□ -1.26
PABPN1-202ENST00000397276 SPRR2EP22531 72 aa7.1□□□□□ -1.27
PABPN1-202ENST00000397276 SPRR2BP35325 72 aa7.1□□□□□ -1.27
PABPN1-202ENST00000397276 SPRR2AP35326 72 aa7.1□□□□□ -1.27
PABPN1-202ENST00000397276 KRTAP6-1Q3LI64 71 aa7.06□□□□□ -1.28
PABPN1-202ENST00000397276 KRTAP4-9Q9BYQ8 210 aa7.05□□□□□ -1.28
PABPN1-202ENST00000397276 MT1AP04731 61 aa6.92□□□□□ -1.3
PABPN1-202ENST00000397276 KRTAP5-5Q701N2 237 aaPredicted RBP6.86□□□□□ -1.31
PABPN1-202ENST00000397276 SPRR2DP22532 72 aa6.79□□□□□ -1.32
PABPN1-202ENST00000397276 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.73□□□□□ -1.33
PABPN1-202ENST00000397276 KRTAP6-3Q3LI67 103 aa6.66□□□□□ -1.34
PABPN1-202ENST00000397276 KRTAP9-7A8MTY7 169 aa6.64□□□□□ -1.35
PABPN1-202ENST00000397276 LCE3DQ9BYE3 92 aa6.62□□□□□ -1.35
PABPN1-202ENST00000397276 OBSCNQ5VST9 7968 aa6.58□□□□□ -1.36
PABPN1-202ENST00000397276 KRTAP9-4Q9BYQ2 154 aa6.55□□□□□ -1.36
PABPN1-202ENST00000397276 PRM1P04553 51 aa6.52□□□□□ -1.37
PABPN1-202ENST00000397276 LCE3EQ5T5B0 92 aa6.52□□□□□ -1.37
PABPN1-202ENST00000397276 KRTAP9-6A0A140TA67 174 aa6.5□□□□□ -1.37
PABPN1-202ENST00000397276 KRTAP6-2Q3LI66 62 aa6.39□□□□□ -1.39
PABPN1-202ENST00000397276 MT3P25713 68 aa6.25□□□□□ -1.41
PABPN1-202ENST00000397276 NEBP20929 6669 aa6.25□□□□□ -1.41
PABPN1-202ENST00000397276 KRTAP5-4Q6L8H1 288 aa6.12□□□□□ -1.43
PABPN1-202ENST00000397276 KRTAP4-6Q9BYQ5 205 aa6.06□□□□□ -1.44
PABPN1-202ENST00000397276 MT4P47944 62 aa6.06□□□□□ -1.44
PABPN1-202ENST00000397276 KRTAP20-2Q3LI61 65 aa5.83□□□□□ -1.48
PABPN1-202ENST00000397276 LCE4AQ5TA78 99 aa5.79□□□□□ -1.48
PABPN1-202ENST00000397276 HMCN1Q96RW7 5635 aa5.78□□□□□ -1.48
PABPN1-202ENST00000397276 KRTAP2-2Q9BYT5 123 aa5.72□□□□□ -1.49
PABPN1-202ENST00000397276 LCE1DQ5T752 114 aa5.68□□□□□ -1.5
PABPN1-202ENST00000397276 KRTAP5-2Q701N4 177 aa5.67□□□□□ -1.5
PABPN1-202ENST00000397276 KRTAP5-3Q6L8H2 238 aa5.52□□□□□ -1.53
PABPN1-202ENST00000397276 KRTAP20-1Q3LI63 56 aa5.5□□□□□ -1.53
PABPN1-202ENST00000397276 MUC5ACP98088 5654 aa5.31□□□□□ -1.56
PABPN1-202ENST00000397276 LCE1BQ5T7P3 118 aa5.2□□□□□ -1.58
PABPN1-202ENST00000397276 LCE1EQ5T753 118 aa5.1□□□□□ -1.59
PABPN1-202ENST00000397276 KRTAP4-11Q9BYQ6 195 aa4.96□□□□□ -1.62
PABPN1-202ENST00000397276 KRTAP5-1Q6L8H4 278 aa4.9□□□□□ -1.62
PABPN1-202ENST00000397276 KRTAP4-2Q9BYR5 136 aa4.9□□□□□ -1.62
PABPN1-202ENST00000397276 KRTAP5-10Q6L8G5 202 aa4.85□□□□□ -1.63
PABPN1-202ENST00000397276 LCE1CQ5T751 118 aa4.84□□□□□ -1.63
PABPN1-202ENST00000397276 KRTAP5-8O75690 187 aa4.65□□□□□ -1.66
PABPN1-202ENST00000397276 AHNAK2Q8IVF2 5795 aa4.6□□□□□ -1.67
PABPN1-202ENST00000397276 KRTAP21-2Q3LI59 83 aa4.53□□□□□ -1.68
PABPN1-202ENST00000397276 KRTAP9-9Q9BYP9 154 aa4.5□□□□□ -1.69
PABPN1-202ENST00000397276 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.5□□□□□ -1.69
PABPN1-202ENST00000397276 KRTAP5-7Q6L8G8 165 aa4.44□□□□□ -1.7
PABPN1-202ENST00000397276 MUC5BQ9HC84 5762 aaPredicted RBP4.33□□□□□ -1.72
PABPN1-202ENST00000397276 LCE1FQ5T754 118 aa4.29□□□□□ -1.72
PABPN1-202ENST00000397276 KRTAP4-4Q9BYR3 166 aa4.28□□□□□ -1.72
PABPN1-202ENST00000397276 MUC19Q7Z5P9 8384 aa4.24□□□□□ -1.73
PABPN1-202ENST00000397276 KRTAP5-11Q6L8G4 156 aa4.16□□□□□ -1.74
PABPN1-202ENST00000397276 KRTAP4-12Q9BQ66 201 aa4.15□□□□□ -1.75
PABPN1-202ENST00000397276 KRTAP21-1Q3LI58 79 aa4.04□□□□□ -1.76
PABPN1-202ENST00000397276 GPR98Q8WXG9 6306 aa3.99□□□□□ -1.77
PABPN1-202ENST00000397276 PHGR1C9JFL3 82 aa3.63□□□□□ -1.83
PABPN1-202ENST00000397276 AHNAKQ09666 5890 aaKnown RBP3.29□□□□□ -1.88
PABPN1-202ENST00000397276 MUC16Q8WXI7 14507 aa2.38□□□□□ -2.03
Retrieved 77 of 20,778 RNA–protein pairs in 11.9 ms