RNA–Protein interactions for RNA: ENST00000397238.6

AGAP3-202, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene AGAP3, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-202ENST00000397238 KRTAP4-3Q9BYR4 195 aa6.57□□□□□ -1.36
AGAP3-202ENST00000397238 MUC12Q9UKN1 5478 aa6.52□□□□□ -1.37
AGAP3-202ENST00000397238 FCGBPQ9Y6R7 5405 aaPredicted RBP6.51□□□□□ -1.37
AGAP3-202ENST00000397238 KRTAP19-6Q3LI70 58 aa6.5□□□□□ -1.37
AGAP3-202ENST00000397238 OBSCNQ5VST9 7968 aa6.5□□□□□ -1.37
AGAP3-202ENST00000397238 DSTQ03001 7570 aaKnown RBP6.49□□□□□ -1.37
AGAP3-202ENST00000397238 MT1GP13640 62 aa6.48□□□□□ -1.37
AGAP3-202ENST00000397238 KRTAP12-4P60329 112 aa6.37□□□□□ -1.39
AGAP3-202ENST00000397238 KRTAP19-4Q3LI73 84 aa6.33□□□□□ -1.4
AGAP3-202ENST00000397238 LCE2DQ5TA82 110 aaPredicted RBP6.26□□□□□ -1.41
AGAP3-202ENST00000397238 SYNE1Q8NF91 8797 aaKnown RBP6.26□□□□□ -1.41
AGAP3-202ENST00000397238 MACF1Q9UPN3 7388 aaKnown RBP6.22□□□□□ -1.41
AGAP3-202ENST00000397238 SPRR2FQ96RM1 72 aa6.2□□□□□ -1.42
AGAP3-202ENST00000397238 MT1MQ8N339 61 aa6.18□□□□□ -1.42
AGAP3-202ENST00000397238 SYNE2Q8WXH0 6885 aaKnown RBP6.14□□□□□ -1.43
AGAP3-202ENST00000397238 LCE3BQ5TA77 95 aa6.13□□□□□ -1.43
AGAP3-202ENST00000397238 KRTAP4-9Q9BYQ8 210 aa6.13□□□□□ -1.43
AGAP3-202ENST00000397238 KRTAP19-3Q7Z4W3 81 aa6.12□□□□□ -1.43
AGAP3-202ENST00000397238 MDN1Q9NU22 5596 aa5.96□□□□□ -1.46
AGAP3-202ENST00000397238 KRTAP9-2Q9BYQ4 174 aa5.95□□□□□ -1.46
AGAP3-202ENST00000397238 LCE5AQ5TCM9 118 aa5.88□□□□□ -1.47
AGAP3-202ENST00000397238 KRTAP6-1Q3LI64 71 aa5.77□□□□□ -1.49
AGAP3-202ENST00000397238 KRTAP9-7A8MTY7 169 aa5.75□□□□□ -1.49
AGAP3-202ENST00000397238 LCE3DQ9BYE3 92 aa5.74□□□□□ -1.49
AGAP3-202ENST00000397238 PRM1P04553 51 aa5.69□□□□□ -1.5
AGAP3-202ENST00000397238 LCE3EQ5T5B0 92 aa5.67□□□□□ -1.5
AGAP3-202ENST00000397238 SPRR2EP22531 72 aa5.65□□□□□ -1.5
AGAP3-202ENST00000397238 SPRR2BP35325 72 aa5.65□□□□□ -1.5
AGAP3-202ENST00000397238 SPRR2AP35326 72 aa5.65□□□□□ -1.5
AGAP3-202ENST00000397238 LCE1AQ5T7P2 110 aa5.65□□□□□ -1.51
AGAP3-202ENST00000397238 MT1AP04731 61 aa5.62□□□□□ -1.51
AGAP3-202ENST00000397238 KRTAP5-5Q701N2 237 aaPredicted RBP5.57□□□□□ -1.52
AGAP3-202ENST00000397238 KRTAP5-9P26371 169 aa5.5□□□□□ -1.53
AGAP3-202ENST00000397238 SPRR2DP22532 72 aa5.39□□□□□ -1.55
AGAP3-202ENST00000397238 KRTAP6-2Q3LI66 62 aa5.37□□□□□ -1.55
AGAP3-202ENST00000397238 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.31□□□□□ -1.56
AGAP3-202ENST00000397238 KRTAP9-4Q9BYQ2 154 aa5.2□□□□□ -1.58
AGAP3-202ENST00000397238 KRTAP6-3Q3LI67 103 aa5.18□□□□□ -1.58
AGAP3-202ENST00000397238 KRTAP9-6A0A140TA67 174 aa5.16□□□□□ -1.58
AGAP3-202ENST00000397238 MT3P25713 68 aa5□□□□□ -1.61
AGAP3-202ENST00000397238 KRTAP2-2Q9BYT5 123 aa4.95□□□□□ -1.62
AGAP3-202ENST00000397238 LCE1EQ5T753 118 aa4.94□□□□□ -1.62
AGAP3-202ENST00000397238 NEBP20929 6669 aa4.92□□□□□ -1.62
AGAP3-202ENST00000397238 MUC19Q7Z5P9 8384 aa4.92□□□□□ -1.62
AGAP3-202ENST00000397238 MT4P47944 62 aa4.9□□□□□ -1.63
AGAP3-202ENST00000397238 KRTAP4-6Q9BYQ5 205 aa4.82□□□□□ -1.64
AGAP3-202ENST00000397238 KRTAP5-4Q6L8H1 288 aa4.68□□□□□ -1.66
AGAP3-202ENST00000397238 LCE1DQ5T752 114 aa4.64□□□□□ -1.67
AGAP3-202ENST00000397238 HMCN1Q96RW7 5635 aa4.58□□□□□ -1.68
AGAP3-202ENST00000397238 KRTAP20-2Q3LI61 65 aa4.55□□□□□ -1.68
AGAP3-202ENST00000397238 LCE4AQ5TA78 99 aa4.48□□□□□ -1.69
AGAP3-202ENST00000397238 MUC5ACP98088 5654 aa4.4□□□□□ -1.71
AGAP3-202ENST00000397238 KRTAP4-11Q9BYQ6 195 aa4.34□□□□□ -1.72
AGAP3-202ENST00000397238 KRTAP5-2Q701N4 177 aa4.33□□□□□ -1.72
AGAP3-202ENST00000397238 KRTAP20-1Q3LI63 56 aa4.29□□□□□ -1.72
AGAP3-202ENST00000397238 LCE1BQ5T7P3 118 aa4.27□□□□□ -1.73
AGAP3-202ENST00000397238 KRTAP5-3Q6L8H2 238 aa4.25□□□□□ -1.73
AGAP3-202ENST00000397238 KRTAP5-10Q6L8G5 202 aa4.06□□□□□ -1.76
AGAP3-202ENST00000397238 LCE1FQ5T754 118 aa3.94□□□□□ -1.78
AGAP3-202ENST00000397238 KRTAP5-1Q6L8H4 278 aa3.83□□□□□ -1.8
AGAP3-202ENST00000397238 KRTAP4-2Q9BYR5 136 aa3.81□□□□□ -1.8
AGAP3-202ENST00000397238 LCE1CQ5T751 118 aa3.7□□□□□ -1.82
AGAP3-202ENST00000397238 AHNAK2Q8IVF2 5795 aa3.67□□□□□ -1.82
AGAP3-202ENST00000397238 KRTAP4-4Q9BYR3 166 aa3.65□□□□□ -1.82
AGAP3-202ENST00000397238 KRTAP5-8O75690 187 aa3.62□□□□□ -1.83
AGAP3-202ENST00000397238 KRTAP21-2Q3LI59 83 aa3.61□□□□□ -1.83
AGAP3-202ENST00000397238 MUC5BQ9HC84 5762 aaPredicted RBP3.53□□□□□ -1.84
AGAP3-202ENST00000397238 KRTAP21-1Q3LI58 79 aa3.41□□□□□ -1.86
AGAP3-202ENST00000397238 KRTAP4-12Q9BQ66 201 aa3.41□□□□□ -1.86
AGAP3-202ENST00000397238 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.38□□□□□ -1.87
AGAP3-202ENST00000397238 KRTAP5-7Q6L8G8 165 aa3.33□□□□□ -1.88
AGAP3-202ENST00000397238 GPR98Q8WXG9 6306 aa3.31□□□□□ -1.88
AGAP3-202ENST00000397238 KRTAP5-11Q6L8G4 156 aa3.19□□□□□ -1.9
AGAP3-202ENST00000397238 KRTAP9-9Q9BYP9 154 aa3.18□□□□□ -1.9
AGAP3-202ENST00000397238 PHGR1C9JFL3 82 aa2.79□□□□□ -1.96
AGAP3-202ENST00000397238 AHNAKQ09666 5890 aaKnown RBP2.72□□□□□ -1.97
AGAP3-202ENST00000397238 MUC16Q8WXI7 14507 aa1.9□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 73.9 ms