RNA–Protein interactions for RNA: ENST00000396593.6

CARHSP1-202, Transcript of calcium regulated heat stable protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CARHSP1, Length 3,026 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARHSP1-202ENST00000396593 KRTAP2-4Q9BYR9 128 aa4.59□□□□□ -1.68
CARHSP1-202ENST00000396593 KRTAP2-1Q9BYU5 128 aa4.59□□□□□ -1.68
CARHSP1-202ENST00000396593 SYNE2Q8WXH0 6885 aaKnown RBP4.57□□□□□ -1.68
CARHSP1-202ENST00000396593 KRTAP19-7Q3SYF9 63 aa4.57□□□□□ -1.68
CARHSP1-202ENST00000396593 KRTAP9-6A8MVA2 160 aa4.56□□□□□ -1.68
CARHSP1-202ENST00000396593 MUC12Q9UKN1 5478 aa4.52□□□□□ -1.69
CARHSP1-202ENST00000396593 MACF1Q9UPN3 7388 aaKnown RBP4.52□□□□□ -1.69
CARHSP1-202ENST00000396593 DSTQ03001 7570 aaKnown RBP4.51□□□□□ -1.69
CARHSP1-202ENST00000396593 KRTAP20-1Q3LI63 56 aa4.5□□□□□ -1.69
CARHSP1-202ENST00000396593 NEBP20929 6669 aa4.49□□□□□ -1.69
CARHSP1-202ENST00000396593 KRTAP19-4Q3LI73 84 aa4.46□□□□□ -1.7
CARHSP1-202ENST00000396593 KRTAP6-3Q3LI67 103 aa4.43□□□□□ -1.7
CARHSP1-202ENST00000396593 MT1EP04732 61 aa4.43□□□□□ -1.7
CARHSP1-202ENST00000396593 MT1LQ93083 61 aa4.43□□□□□ -1.7
CARHSP1-202ENST00000396593 KRTAP4-3Q9BYR4 195 aa4.39□□□□□ -1.71
CARHSP1-202ENST00000396593 LOC100996750A0A140TA64 210 aa4.35□□□□□ -1.71
CARHSP1-202ENST00000396593 KRTAP12-4P60329 112 aa4.32□□□□□ -1.72
CARHSP1-202ENST00000396593 MT1GP13640 62 aa4.29□□□□□ -1.72
CARHSP1-202ENST00000396593 GPR98Q8WXG9 6306 aa4.28□□□□□ -1.72
CARHSP1-202ENST00000396593 SYNE1Q8NF91 8797 aaKnown RBP4.25□□□□□ -1.73
CARHSP1-202ENST00000396593 KRTAP2-2Q9BYT5 123 aa4.2□□□□□ -1.74
CARHSP1-202ENST00000396593 SPRR2FQ96RM1 72 aa4.19□□□□□ -1.74
CARHSP1-202ENST00000396593 MT1MQ8N339 61 aa4.16□□□□□ -1.74
CARHSP1-202ENST00000396593 KRTAP19-3Q7Z4W3 81 aa4.15□□□□□ -1.74
CARHSP1-202ENST00000396593 LCE1AQ5T7P2 110 aa4.13□□□□□ -1.75
CARHSP1-202ENST00000396593 MDN1Q9NU22 5596 aa4.12□□□□□ -1.75
CARHSP1-202ENST00000396593 OBSCNQ5VST9 7968 aa4.12□□□□□ -1.75
CARHSP1-202ENST00000396593 KRTAP5-9P26371 169 aa4.08□□□□□ -1.76
CARHSP1-202ENST00000396593 LCE3BQ5TA77 95 aa3.99□□□□□ -1.77
CARHSP1-202ENST00000396593 LCE5AQ5TCM9 118 aa3.97□□□□□ -1.77
CARHSP1-202ENST00000396593 SPRR2EP22531 72 aa3.96□□□□□ -1.78
CARHSP1-202ENST00000396593 SPRR2BP35325 72 aa3.96□□□□□ -1.78
CARHSP1-202ENST00000396593 SPRR2AP35326 72 aa3.96□□□□□ -1.78
CARHSP1-202ENST00000396593 PRM1P04553 51 aa3.96□□□□□ -1.78
CARHSP1-202ENST00000396593 KRTAP4-9Q9BYQ8 210 aa3.95□□□□□ -1.78
CARHSP1-202ENST00000396593 LCE1EQ5T753 118 aa3.94□□□□□ -1.78
CARHSP1-202ENST00000396593 KRTAP6-1Q3LI64 71 aa3.82□□□□□ -1.8
CARHSP1-202ENST00000396593 SPRR2DP22532 72 aa3.81□□□□□ -1.8
CARHSP1-202ENST00000396593 KRTAP5-5Q701N2 237 aaPredicted RBP3.78□□□□□ -1.8
CARHSP1-202ENST00000396593 LCE1DQ5T752 114 aa3.78□□□□□ -1.8
CARHSP1-202ENST00000396593 LCE3EQ5T5B0 92 aa3.67□□□□□ -1.82
CARHSP1-202ENST00000396593 MT1AP04731 61 aa3.67□□□□□ -1.82
CARHSP1-202ENST00000396593 LCE3DQ9BYE3 92 aa3.65□□□□□ -1.83
CARHSP1-202ENST00000396593 AHNAK2Q8IVF2 5795 aa3.59□□□□□ -1.83
CARHSP1-202ENST00000396593 KRTAP5-10Q6L8G5 202 aa3.56□□□□□ -1.84
CARHSP1-202ENST00000396593 KRTAP5-7Q6L8G8 165 aa3.56□□□□□ -1.84
CARHSP1-202ENST00000396593 KRTAP6-2Q3LI66 62 aa3.55□□□□□ -1.84
CARHSP1-202ENST00000396593 LCE1FQ5T754 118 aa3.48□□□□□ -1.85
CARHSP1-202ENST00000396593 HMCN1Q96RW7 5635 aa3.47□□□□□ -1.85
CARHSP1-202ENST00000396593 KRTAP9-4Q9BYQ2 154 aa3.46□□□□□ -1.85
CARHSP1-202ENST00000396593 MT4P47944 62 aa3.37□□□□□ -1.87
CARHSP1-202ENST00000396593 KRTAP5-4Q6L8H1 288 aa3.34□□□□□ -1.87
CARHSP1-202ENST00000396593 MT3P25713 68 aa3.34□□□□□ -1.88
CARHSP1-202ENST00000396593 LCE4AQ5TA78 99 aa3.32□□□□□ -1.88
CARHSP1-202ENST00000396593 KRTAP4-6Q9BYQ5 205 aa3.3□□□□□ -1.88
CARHSP1-202ENST00000396593 AHNAKQ09666 5890 aaKnown RBP3.27□□□□□ -1.89
CARHSP1-202ENST00000396593 KRTAP5-3Q6L8H2 238 aa3.26□□□□□ -1.89
CARHSP1-202ENST00000396593 KRTAP9-9Q9BYP9 154 aa3.18□□□□□ -1.9
CARHSP1-202ENST00000396593 MUC5BQ9HC84 5762 aaPredicted RBP3.17□□□□□ -1.9
CARHSP1-202ENST00000396593 KRTAP20-2Q3LI61 65 aa3.17□□□□□ -1.9
CARHSP1-202ENST00000396593 MUC5ACP98088 5654 aa3.09□□□□□ -1.92
CARHSP1-202ENST00000396593 MUC19Q7Z5P9 8384 aa3.06□□□□□ -1.92
CARHSP1-202ENST00000396593 KRTAP5-2Q701N4 177 aa2.99□□□□□ -1.93
CARHSP1-202ENST00000396593 KRTAP4-11Q9BYQ6 195 aa2.94□□□□□ -1.94
CARHSP1-202ENST00000396593 LCE1BQ5T7P3 118 aa2.91□□□□□ -1.94
CARHSP1-202ENST00000396593 KRTAP5-8O75690 187 aa2.77□□□□□ -1.97
CARHSP1-202ENST00000396593 KRTAP5-1Q6L8H4 278 aa2.65□□□□□ -1.99
CARHSP1-202ENST00000396593 LCE1CQ5T751 118 aa2.63□□□□□ -1.99
CARHSP1-202ENST00000396593 KRTAP4-2Q9BYR5 136 aa2.57□□□□□ -2
CARHSP1-202ENST00000396593 KRTAP21-1Q3LI58 79 aa2.51□□□□□ -2.01
CARHSP1-202ENST00000396593 KRTAP4-4Q9BYR3 166 aa2.45□□□□□ -2.02
CARHSP1-202ENST00000396593 KRTAP21-2Q3LI59 83 aa2.39□□□□□ -2.03
CARHSP1-202ENST00000396593 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.34□□□□□ -2.04
CARHSP1-202ENST00000396593 KRTAP4-12Q9BQ66 201 aa2.33□□□□□ -2.04
CARHSP1-202ENST00000396593 KRTAP5-11Q6L8G4 156 aa2.17□□□□□ -2.06
CARHSP1-202ENST00000396593 PHGR1C9JFL3 82 aa2.1□□□□□ -2.07
CARHSP1-202ENST00000396593 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 301.4 ms