RNA–Protein interactions for RNA: ENST00000396263.6

CCHCR1-202, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5 BASIC

Gene CCHCR1, Length 2,490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-202ENST00000396263 KRTAP4-7Q9BYR0 210 aa5.53□□□□□ -1.52
CCHCR1-202ENST00000396263 MACF1Q9UPN3 7388 aaKnown RBP5.51□□□□□ -1.53
CCHCR1-202ENST00000396263 KRTAP2-3P0C7H8 128 aa5.46□□□□□ -1.54
CCHCR1-202ENST00000396263 KRTAP2-4Q9BYR9 128 aa5.46□□□□□ -1.54
CCHCR1-202ENST00000396263 KRTAP2-1Q9BYU5 128 aa5.46□□□□□ -1.54
CCHCR1-202ENST00000396263 MUC12Q9UKN1 5478 aa5.41□□□□□ -1.54
CCHCR1-202ENST00000396263 SYNE2Q8WXH0 6885 aaKnown RBP5.36□□□□□ -1.55
CCHCR1-202ENST00000396263 KRTAP9-6A0A140TA67 174 aa5.28□□□□□ -1.56
CCHCR1-202ENST00000396263 SPRR2FQ96RM1 72 aa5.27□□□□□ -1.57
CCHCR1-202ENST00000396263 KRTAP19-3Q7Z4W3 81 aa5.2□□□□□ -1.58
CCHCR1-202ENST00000396263 MT1MQ8N339 61 aa5.19□□□□□ -1.58
CCHCR1-202ENST00000396263 MT1GP13640 62 aa5.18□□□□□ -1.58
CCHCR1-202ENST00000396263 KRTAP4-3Q9BYR4 195 aa5.18□□□□□ -1.58
CCHCR1-202ENST00000396263 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.17□□□□□ -1.58
CCHCR1-202ENST00000396263 KRTAP5-9P26371 169 aa5.17□□□□□ -1.58
CCHCR1-202ENST00000396263 DSTQ03001 7570 aaKnown RBP5.16□□□□□ -1.58
CCHCR1-202ENST00000396263 LOC100996750A0A140TA64 210 aa5.16□□□□□ -1.58
CCHCR1-202ENST00000396263 MDN1Q9NU22 5596 aa5.14□□□□□ -1.59
CCHCR1-202ENST00000396263 LCE5AQ5TCM9 118 aa5.08□□□□□ -1.6
CCHCR1-202ENST00000396263 LCE1AQ5T7P2 110 aa5.03□□□□□ -1.6
CCHCR1-202ENST00000396263 KRTAP6-3Q3LI67 103 aa5.02□□□□□ -1.61
CCHCR1-202ENST00000396263 SPRR2EP22531 72 aa4.97□□□□□ -1.61
CCHCR1-202ENST00000396263 SPRR2BP35325 72 aa4.97□□□□□ -1.61
CCHCR1-202ENST00000396263 SPRR2AP35326 72 aa4.97□□□□□ -1.61
CCHCR1-202ENST00000396263 KRTAP12-4P60329 112 aa4.95□□□□□ -1.62
CCHCR1-202ENST00000396263 KRTAP9-7A8MTY7 169 aa4.85□□□□□ -1.63
CCHCR1-202ENST00000396263 SPRR2DP22532 72 aa4.78□□□□□ -1.64
CCHCR1-202ENST00000396263 NEBP20929 6669 aa4.77□□□□□ -1.65
CCHCR1-202ENST00000396263 LCE3BQ5TA77 95 aa4.73□□□□□ -1.65
CCHCR1-202ENST00000396263 KRTAP6-1Q3LI64 71 aa4.68□□□□□ -1.66
CCHCR1-202ENST00000396263 MT1AP04731 61 aa4.67□□□□□ -1.66
CCHCR1-202ENST00000396263 SYNE1Q8NF91 8797 aaKnown RBP4.63□□□□□ -1.67
CCHCR1-202ENST00000396263 KRTAP4-9Q9BYQ8 210 aa4.63□□□□□ -1.67
CCHCR1-202ENST00000396263 KRTAP5-5Q701N2 237 aaPredicted RBP4.62□□□□□ -1.67
CCHCR1-202ENST00000396263 LCE3DQ9BYE3 92 aa4.5□□□□□ -1.69
CCHCR1-202ENST00000396263 PRM1P04553 51 aa4.46□□□□□ -1.7
CCHCR1-202ENST00000396263 LCE3EQ5T5B0 92 aa4.44□□□□□ -1.7
CCHCR1-202ENST00000396263 KRTAP9-4Q9BYQ2 154 aa4.39□□□□□ -1.71
CCHCR1-202ENST00000396263 KRTAP2-2Q9BYT5 123 aa4.36□□□□□ -1.71
CCHCR1-202ENST00000396263 KRTAP5-4Q6L8H1 288 aa4.33□□□□□ -1.72
CCHCR1-202ENST00000396263 OBSCNQ5VST9 7968 aa4.32□□□□□ -1.72
CCHCR1-202ENST00000396263 KRTAP20-1Q3LI63 56 aa4.29□□□□□ -1.72
CCHCR1-202ENST00000396263 KRTAP6-2Q3LI66 62 aa4.2□□□□□ -1.74
CCHCR1-202ENST00000396263 LCE4AQ5TA78 99 aa4.2□□□□□ -1.74
CCHCR1-202ENST00000396263 MT3P25713 68 aa4.19□□□□□ -1.74
CCHCR1-202ENST00000396263 MT4P47944 62 aa4.19□□□□□ -1.74
CCHCR1-202ENST00000396263 KRTAP4-6Q9BYQ5 205 aa4.17□□□□□ -1.74
CCHCR1-202ENST00000396263 HMCN1Q96RW7 5635 aa4.12□□□□□ -1.75
CCHCR1-202ENST00000396263 LCE1DQ5T752 114 aa4.1□□□□□ -1.75
CCHCR1-202ENST00000396263 KRTAP20-2Q3LI61 65 aa4.06□□□□□ -1.76
CCHCR1-202ENST00000396263 LCE1EQ5T753 118 aa3.98□□□□□ -1.77
CCHCR1-202ENST00000396263 KRTAP5-2Q701N4 177 aa3.94□□□□□ -1.78
CCHCR1-202ENST00000396263 LCE1FQ5T754 118 aa3.94□□□□□ -1.78
CCHCR1-202ENST00000396263 KRTAP5-3Q6L8H2 238 aa3.92□□□□□ -1.78
CCHCR1-202ENST00000396263 AHNAK2Q8IVF2 5795 aa3.6□□□□□ -1.83
CCHCR1-202ENST00000396263 MUC5ACP98088 5654 aa3.54□□□□□ -1.84
CCHCR1-202ENST00000396263 KRTAP4-11Q9BYQ6 195 aa3.5□□□□□ -1.85
CCHCR1-202ENST00000396263 KRTAP5-1Q6L8H4 278 aa3.42□□□□□ -1.86
CCHCR1-202ENST00000396263 KRTAP9-9Q9BYP9 154 aa3.42□□□□□ -1.86
CCHCR1-202ENST00000396263 KRTAP5-8O75690 187 aa3.38□□□□□ -1.87
CCHCR1-202ENST00000396263 KRTAP5-10Q6L8G5 202 aa3.35□□□□□ -1.87
CCHCR1-202ENST00000396263 LCE1BQ5T7P3 118 aa3.33□□□□□ -1.88
CCHCR1-202ENST00000396263 KRTAP4-2Q9BYR5 136 aa3.31□□□□□ -1.88
CCHCR1-202ENST00000396263 LCE1CQ5T751 118 aa3.27□□□□□ -1.89
CCHCR1-202ENST00000396263 KRTAP5-7Q6L8G8 165 aa3.25□□□□□ -1.89
CCHCR1-202ENST00000396263 GPR98Q8WXG9 6306 aa3.19□□□□□ -1.9
CCHCR1-202ENST00000396263 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.11□□□□□ -1.91
CCHCR1-202ENST00000396263 KRTAP21-2Q3LI59 83 aa3.04□□□□□ -1.92
CCHCR1-202ENST00000396263 MUC5BQ9HC84 5762 aaPredicted RBP3.02□□□□□ -1.93
CCHCR1-202ENST00000396263 KRTAP5-11Q6L8G4 156 aa2.87□□□□□ -1.95
CCHCR1-202ENST00000396263 KRTAP21-1Q3LI58 79 aa2.83□□□□□ -1.96
CCHCR1-202ENST00000396263 KRTAP4-12Q9BQ66 201 aa2.79□□□□□ -1.96
CCHCR1-202ENST00000396263 MUC19Q7Z5P9 8384 aa2.75□□□□□ -1.97
CCHCR1-202ENST00000396263 KRTAP4-4Q9BYR3 166 aa2.75□□□□□ -1.97
CCHCR1-202ENST00000396263 AHNAKQ09666 5890 aaKnown RBP2.66□□□□□ -1.98
CCHCR1-202ENST00000396263 PHGR1C9JFL3 82 aa2.48□□□□□ -2.01
CCHCR1-202ENST00000396263 MUC16Q8WXI7 14507 aa1.67□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 58.2 ms