RNA–Protein interactions for RNA: ENST00000396101.7

LST1-212, leukocyte specific transcript 1, humanhuman

TSL 1 (best) BASIC

Gene LST1, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-212ENST00000396101 PRO0628Q9UI54 55 aa4.34□□□□□ -1.71
LST1-212ENST00000396101 LCE3DQ9BYE3 92 aa4.33□□□□□ -1.72
LST1-212ENST00000396101 SEC61GP60059 68 aa4.32□□□□□ -1.72
LST1-212ENST00000396101 CCDC179H3BU77 68 aa4.31□□□□□ -1.72
LST1-212ENST00000396101 SERP1Q9Y6X1 66 aa4.31□□□□□ -1.72
LST1-212ENST00000396101 MDN1Q9NU22 5596 aa4.31□□□□□ -1.72
LST1-212ENST00000396101 KRTAP8-1Q8IUC2 63 aa4.28□□□□□ -1.72
LST1-212ENST00000396101 SPRR2FQ96RM1 72 aa4.28□□□□□ -1.72
LST1-212ENST00000396101 A0A0D9SG42 100 aa4.27□□□□□ -1.73
LST1-212ENST00000396101 SPATA8Q6RVD6 105 aa4.27□□□□□ -1.73
LST1-212ENST00000396101 A0A1B0GU33 70 aa4.26□□□□□ -1.73
LST1-212ENST00000396101 V9GYY9 64 aa4.25□□□□□ -1.73
LST1-212ENST00000396101 ATP5EP56381 51 aaPredicted RBP4.24□□□□□ -1.73
LST1-212ENST00000396101 CAMK2N1Q7Z7J9 78 aa4.24□□□□□ -1.73
LST1-212ENST00000396101 A0A1B0GU69 56 aa4.2□□□□□ -1.74
LST1-212ENST00000396101 SPRR2EP22531 72 aa4.19□□□□□ -1.74
LST1-212ENST00000396101 SPRR2BP35325 72 aa4.19□□□□□ -1.74
LST1-212ENST00000396101 SPRR2AP35326 72 aa4.19□□□□□ -1.74
LST1-212ENST00000396101 SPINT4Q6UDR6 99 aa4.19□□□□□ -1.74
LST1-212ENST00000396101 SMIM26A0A096LP01 95 aa4.18□□□□□ -1.74
LST1-212ENST00000396101 KRTAP20-1Q3LI63 56 aa4.17□□□□□ -1.74
LST1-212ENST00000396101 KRTAP12-1P59990 96 aa4.15□□□□□ -1.75
LST1-212ENST00000396101 PP632Q6XCG6 107 aa4.13□□□□□ -1.75
LST1-212ENST00000396101 KRTAP2-3P0C7H8 128 aa4.09□□□□□ -1.75
LST1-212ENST00000396101 KRTAP2-4Q9BYR9 128 aa4.09□□□□□ -1.75
LST1-212ENST00000396101 PMAIP1Q13794 54 aa4.07□□□□□ -1.76
LST1-212ENST00000396101 PRR15LQ9BU68 103 aa4.07□□□□□ -1.76
LST1-212ENST00000396101 LINC01558Q9Y6Z2 57 aa4.07□□□□□ -1.76
LST1-212ENST00000396101 SPRR2DP22532 72 aa4.04□□□□□ -1.76
LST1-212ENST00000396101 KRTAP19-7Q3SYF9 63 aa4□□□□□ -1.77
LST1-212ENST00000396101 C10orf95Q9H7T3 257 aa3.98□□□□□ -1.77
LST1-212ENST00000396101 Q1T7F1 81 aa3.97□□□□□ -1.77
LST1-212ENST00000396101 BRK1Q8WUW1 75 aa3.97□□□□□ -1.77
LST1-212ENST00000396101 KRTAP2-1Q9BYU5 128 aa3.97□□□□□ -1.77
LST1-212ENST00000396101 MT1EP04732 61 aa3.96□□□□□ -1.78
LST1-212ENST00000396101 UQCR11O14957 56 aa3.95□□□□□ -1.78
LST1-212ENST00000396101 KRTAP19-5Q3LI72 72 aa3.94□□□□□ -1.78
LST1-212ENST00000396101 KTN1-AS1Q86SY8 53 aa3.93□□□□□ -1.78
LST1-212ENST00000396101 TNP1P09430 55 aa3.92□□□□□ -1.78
LST1-212ENST00000396101 PSPHP1O15172 72 aa3.89□□□□□ -1.79
LST1-212ENST00000396101 KRTAP19-3Q7Z4W3 81 aa3.89□□□□□ -1.79
LST1-212ENST00000396101 MIR22HGQ0VDD5 57 aa3.88□□□□□ -1.79
LST1-212ENST00000396101 DSTQ03001 7570 aaKnown RBP3.86□□□□□ -1.79
LST1-212ENST00000396101 MT1GP13640 62 aa3.82□□□□□ -1.8
LST1-212ENST00000396101 SPRR5A0A1B0GTR4 108 aa3.8□□□□□ -1.8
LST1-212ENST00000396101 MT1LQ93083 61 aa3.8□□□□□ -1.8
LST1-212ENST00000396101 K7ERS5 55 aa3.77□□□□□ -1.81
LST1-212ENST00000396101 MT1MQ8N339 61 aa3.76□□□□□ -1.81
LST1-212ENST00000396101 CDC42SE1Q9NRR8 79 aa3.76□□□□□ -1.81
LST1-212ENST00000396101 A6NED7 52 aa3.74□□□□□ -1.81
LST1-212ENST00000396101 KRTAP12-3P60328 96 aa3.73□□□□□ -1.81
LST1-212ENST00000396101 KRTAP25-1Q3LHN0 102 aa3.72□□□□□ -1.81
LST1-212ENST00000396101 KRTAP5-8O75690 187 aa3.71□□□□□ -1.82
LST1-212ENST00000396101 KRTAP5-7Q6L8G8 165 aa3.69□□□□□ -1.82
LST1-212ENST00000396101 MUC19Q7Z5P9 8384 aa3.58□□□□□ -1.84
LST1-212ENST00000396101 MT4P47944 62 aa3.57□□□□□ -1.84
LST1-212ENST00000396101 ROMO1P60602 79 aa3.56□□□□□ -1.84
LST1-212ENST00000396101 HMCN1Q96RW7 5635 aa3.53□□□□□ -1.84
LST1-212ENST00000396101 GPR98Q8WXG9 6306 aa3.51□□□□□ -1.85
LST1-212ENST00000396101 AHNAK2Q8IVF2 5795 aa3.35□□□□□ -1.87
LST1-212ENST00000396101 KRTAP12-4P60329 112 aa3.33□□□□□ -1.88
LST1-212ENST00000396101 KRTAP20-2Q3LI61 65 aa3.33□□□□□ -1.88
LST1-212ENST00000396101 SYNE1Q8NF91 8797 aaKnown RBP3.33□□□□□ -1.88
LST1-212ENST00000396101 KRTAP5-10Q6L8G5 202 aa3.25□□□□□ -1.89
LST1-212ENST00000396101 MT1AP04731 61 aa3.22□□□□□ -1.89
LST1-212ENST00000396101 KRTAP6-1Q3LI64 71 aa3.22□□□□□ -1.89
LST1-212ENST00000396101 KRTAP21-2Q3LI59 83 aa3.18□□□□□ -1.9
LST1-212ENST00000396101 KRTAP6-2Q3LI66 62 aa3.07□□□□□ -1.92
LST1-212ENST00000396101 LUZP6Q538Z0 58 aa3.07□□□□□ -1.92
LST1-212ENST00000396101 MUC5BQ9HC84 5762 aaPredicted RBP2.78□□□□□ -1.96
LST1-212ENST00000396101 MUC5ACP98088 5654 aa2.77□□□□□ -1.97
LST1-212ENST00000396101 INE1O15225 51 aa2.77□□□□□ -1.97
LST1-212ENST00000396101 AHNAKQ09666 5890 aaKnown RBP2.76□□□□□ -1.97
LST1-212ENST00000396101 PHGR1C9JFL3 82 aa1.93□□□□□ -2.1
LST1-212ENST00000396101 PRM1P04553 51 aa1.84□□□□□ -2.11
LST1-212ENST00000396101 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
LST1-212ENST00000396101 KRTAP21-1Q3LI58 79 aa1.42□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 6.1 ms