RNA–Protein interactions for RNA: ENST00000395978.7

BDNF-203, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,988 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-203ENST00000395978 MT1EP04732 61 aa2.24□□□□□ -2.05
BDNF-203ENST00000395978 MT1LQ93083 61 aa2.24□□□□□ -2.05
BDNF-203ENST00000395978 KRTAP4-7Q9BYR0 210 aa2.23□□□□□ -2.05
BDNF-203ENST00000395978 MT1GP13640 62 aa2.22□□□□□ -2.05
BDNF-203ENST00000395978 KRTAP19-7Q3SYF9 63 aa2.22□□□□□ -2.05
BDNF-203ENST00000395978 KRTAP9-9Q9BYP9 154 aa2.21□□□□□ -2.06
BDNF-203ENST00000395978 KRTAP9-4Q9BYQ2 154 aa2.21□□□□□ -2.06
BDNF-203ENST00000395978 LCE1EQ5T753 118 aa2.2□□□□□ -2.06
BDNF-203ENST00000395978 LCE1FQ5T754 118 aa2.2□□□□□ -2.06
BDNF-203ENST00000395978 LCE3BQ5TA77 95 aa2.2□□□□□ -2.06
BDNF-203ENST00000395978 KMT2DO14686 5537 aa2.18□□□□□ -2.06
BDNF-203ENST00000395978 KRTAP19-3Q7Z4W3 81 aa2.17□□□□□ -2.06
BDNF-203ENST00000395978 LCE5AQ5TCM9 118 aa2.17□□□□□ -2.06
BDNF-203ENST00000395978 SSPOA2VEC9 5147 aa2.16□□□□□ -2.06
BDNF-203ENST00000395978 LCE1DQ5T752 114 aa2.16□□□□□ -2.06
BDNF-203ENST00000395978 MUC19Q7Z5P9 8384 aa2.15□□□□□ -2.07
BDNF-203ENST00000395978 KRTAP4-9Q9BYQ8 210 aa2.13□□□□□ -2.07
BDNF-203ENST00000395978 MT1MQ8N339 61 aa2.12□□□□□ -2.07
BDNF-203ENST00000395978 FCGBPQ9Y6R7 5405 aaPredicted RBP2.12□□□□□ -2.07
BDNF-203ENST00000395978 OBSCNQ5VST9 7968 aa2.12□□□□□ -2.07
BDNF-203ENST00000395978 LCE1AQ5T7P2 110 aa2.12□□□□□ -2.07
BDNF-203ENST00000395978 KRTAP4-2Q9BYR5 136 aa2.12□□□□□ -2.07
BDNF-203ENST00000395978 KRTAP9-6A8MVA2 160 aa2.1□□□□□ -2.07
BDNF-203ENST00000395978 LCE3EQ5T5B0 92 aa2.1□□□□□ -2.07
BDNF-203ENST00000395978 LCE4AQ5TA78 99 aa2.1□□□□□ -2.07
BDNF-203ENST00000395978 SYNE1Q8NF91 8797 aaKnown RBP2.09□□□□□ -2.07
BDNF-203ENST00000395978 SPRR2EP22531 72 aa2.09□□□□□ -2.07
BDNF-203ENST00000395978 SPRR2BP35325 72 aa2.09□□□□□ -2.07
BDNF-203ENST00000395978 SPRR2AP35326 72 aa2.09□□□□□ -2.07
BDNF-203ENST00000395978 KRTAP4-3Q9BYR4 195 aa2.09□□□□□ -2.07
BDNF-203ENST00000395978 KRTAP2-2Q9BYT5 123 aa2.08□□□□□ -2.08
BDNF-203ENST00000395978 KRTAP9-7A8MTY7 169 aa2.07□□□□□ -2.08
BDNF-203ENST00000395978 KRTAP12-4P60329 112 aa2.07□□□□□ -2.08
BDNF-203ENST00000395978 KRTAP2-3P0C7H8 128 aa2.07□□□□□ -2.08
BDNF-203ENST00000395978 KRTAP2-4Q9BYR9 128 aa2.07□□□□□ -2.08
BDNF-203ENST00000395978 KRTAP2-1Q9BYU5 128 aa2.07□□□□□ -2.08
BDNF-203ENST00000395978 HMCN1Q96RW7 5635 aa2.05□□□□□ -2.08
BDNF-203ENST00000395978 KRTAP6-3Q3LI67 103 aa2.03□□□□□ -2.08
BDNF-203ENST00000395978 DSTQ03001 7570 aaKnown RBP2.03□□□□□ -2.08
BDNF-203ENST00000395978 MACF1Q9UPN3 7388 aaKnown RBP2.03□□□□□ -2.08
BDNF-203ENST00000395978 KRTAP4-11Q9BYQ6 195 aa2.02□□□□□ -2.09
BDNF-203ENST00000395978 SYNE2Q8WXH0 6885 aaKnown RBP2.01□□□□□ -2.09
BDNF-203ENST00000395978 SPRR2DP22532 72 aa2.01□□□□□ -2.09
BDNF-203ENST00000395978 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.01□□□□□ -2.09
BDNF-203ENST00000395978 MUC12Q9UKN1 5478 aa2□□□□□ -2.09
BDNF-203ENST00000395978 KRTAP5-9P26371 169 aa1.99□□□□□ -2.09
BDNF-203ENST00000395978 LCE3DQ9BYE3 92 aa1.99□□□□□ -2.09
BDNF-203ENST00000395978 MDN1Q9NU22 5596 aa1.94□□□□□ -2.1
BDNF-203ENST00000395978 MT1AP04731 61 aa1.94□□□□□ -2.1
BDNF-203ENST00000395978 KRTAP6-1Q3LI64 71 aa1.88□□□□□ -2.11
BDNF-203ENST00000395978 MT3P25713 68 aa1.88□□□□□ -2.11
BDNF-203ENST00000395978 MUC5BQ9HC84 5762 aaPredicted RBP1.87□□□□□ -2.11
BDNF-203ENST00000395978 KRTAP20-1Q3LI63 56 aa1.81□□□□□ -2.12
BDNF-203ENST00000395978 NEBP20929 6669 aa1.8□□□□□ -2.12
BDNF-203ENST00000395978 PRM1P04553 51 aa1.8□□□□□ -2.12
BDNF-203ENST00000395978 MT4P47944 62 aa1.77□□□□□ -2.13
BDNF-203ENST00000395978 KRTAP6-2Q3LI66 62 aa1.76□□□□□ -2.13
BDNF-203ENST00000395978 KRTAP5-5Q701N2 237 aaPredicted RBP1.68□□□□□ -2.14
BDNF-203ENST00000395978 KRTAP5-2Q701N4 177 aa1.65□□□□□ -2.15
BDNF-203ENST00000395978 KRTAP5-4Q6L8H1 288 aa1.64□□□□□ -2.15
BDNF-203ENST00000395978 LCE1BQ5T7P3 118 aa1.63□□□□□ -2.15
BDNF-203ENST00000395978 KRTAP20-2Q3LI61 65 aa1.58□□□□□ -2.16
BDNF-203ENST00000395978 GPR98Q8WXG9 6306 aa1.57□□□□□ -2.16
BDNF-203ENST00000395978 LCE1CQ5T751 118 aa1.4□□□□□ -2.18
BDNF-203ENST00000395978 KRTAP5-8O75690 187 aa1.38□□□□□ -2.19
BDNF-203ENST00000395978 MUC5ACP98088 5654 aa1.37□□□□□ -2.19
BDNF-203ENST00000395978 KRTAP5-11Q6L8G4 156 aa1.33□□□□□ -2.2
BDNF-203ENST00000395978 AHNAK2Q8IVF2 5795 aa1.32□□□□□ -2.2
BDNF-203ENST00000395978 KRTAP5-10Q6L8G5 202 aa1.31□□□□□ -2.2
BDNF-203ENST00000395978 KRTAP4-4Q9BYR3 166 aa1.29□□□□□ -2.2
BDNF-203ENST00000395978 KRTAP5-1Q6L8H4 278 aa1.27□□□□□ -2.21
BDNF-203ENST00000395978 KRTAP5-7Q6L8G8 165 aa1.27□□□□□ -2.21
BDNF-203ENST00000395978 AHNAKQ09666 5890 aaKnown RBP1.12□□□□□ -2.23
BDNF-203ENST00000395978 KRTAP21-2Q3LI59 83 aa1.12□□□□□ -2.23
BDNF-203ENST00000395978 KRTAP21-1Q3LI58 79 aa0.96□□□□□ -2.26
BDNF-203ENST00000395978 PHGR1C9JFL3 82 aa0.94□□□□□ -2.26
BDNF-203ENST00000395978 MUC16Q8WXI7 14507 aa0.59□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 153.5 ms