RNA–Protein interactions for RNA: ENST00000395667.7

CDRT1-203, CMT1A duplicated region transcript 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDRT1, Length 3,016 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-203ENST00000395667 KRTAP2-3P0C7H8 128 aa3.1□□□□□ -1.91
CDRT1-203ENST00000395667 KRTAP2-4Q9BYR9 128 aa3.1□□□□□ -1.91
CDRT1-203ENST00000395667 KRTAP2-1Q9BYU5 128 aa3.1□□□□□ -1.91
CDRT1-203ENST00000395667 FCGBPQ9Y6R7 5405 aaPredicted RBP3.07□□□□□ -1.92
CDRT1-203ENST00000395667 KRTAP4-3Q9BYR4 195 aa3.05□□□□□ -1.92
CDRT1-203ENST00000395667 MUC12Q9UKN1 5478 aa3.05□□□□□ -1.92
CDRT1-203ENST00000395667 KRTAP19-3Q7Z4W3 81 aa3.03□□□□□ -1.92
CDRT1-203ENST00000395667 MT1GP13640 62 aa3.01□□□□□ -1.93
CDRT1-203ENST00000395667 MT1MQ8N339 61 aa3.01□□□□□ -1.93
CDRT1-203ENST00000395667 CRCT1Q9UGL9 99 aa2.98□□□□□ -1.93
CDRT1-203ENST00000395667 SPRR2FQ96RM1 72 aa2.97□□□□□ -1.93
CDRT1-203ENST00000395667 LCE5AQ5TCM9 118 aa2.91□□□□□ -1.94
CDRT1-203ENST00000395667 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.89□□□□□ -1.95
CDRT1-203ENST00000395667 DSTQ03001 7570 aaKnown RBP2.89□□□□□ -1.95
CDRT1-203ENST00000395667 KRTAP9-2Q9BYQ4 174 aa2.86□□□□□ -1.95
CDRT1-203ENST00000395667 MACF1Q9UPN3 7388 aaKnown RBP2.86□□□□□ -1.95
CDRT1-203ENST00000395667 KRTAP9-6A0A140TA67 174 aa2.86□□□□□ -1.95
CDRT1-203ENST00000395667 MDN1Q9NU22 5596 aa2.79□□□□□ -1.96
CDRT1-203ENST00000395667 LCE3BQ5TA77 95 aa2.79□□□□□ -1.96
CDRT1-203ENST00000395667 SYNE2Q8WXH0 6885 aaKnown RBP2.78□□□□□ -1.96
CDRT1-203ENST00000395667 KRTAP12-4P60329 112 aa2.76□□□□□ -1.97
CDRT1-203ENST00000395667 LCE1AQ5T7P2 110 aa2.74□□□□□ -1.97
CDRT1-203ENST00000395667 KRTAP6-1Q3LI64 71 aa2.73□□□□□ -1.97
CDRT1-203ENST00000395667 KRTAP9-9Q9BYP9 154 aa2.72□□□□□ -1.97
CDRT1-203ENST00000395667 KRTAP9-4Q9BYQ2 154 aa2.72□□□□□ -1.97
CDRT1-203ENST00000395667 KRTAP5-9P26371 169 aa2.72□□□□□ -1.97
CDRT1-203ENST00000395667 KRTAP4-12Q9BQ66 201 aa2.72□□□□□ -1.97
CDRT1-203ENST00000395667 SPRR2EP22531 72 aa2.71□□□□□ -1.98
CDRT1-203ENST00000395667 SPRR2BP35325 72 aa2.71□□□□□ -1.98
CDRT1-203ENST00000395667 SPRR2AP35326 72 aa2.71□□□□□ -1.98
CDRT1-203ENST00000395667 KRTAP4-9Q9BYQ8 210 aa2.71□□□□□ -1.98
CDRT1-203ENST00000395667 MT1AP04731 61 aa2.7□□□□□ -1.98
CDRT1-203ENST00000395667 SYNE1Q8NF91 8797 aaKnown RBP2.67□□□□□ -1.98
CDRT1-203ENST00000395667 KRTAP5-5Q701N2 237 aaPredicted RBP2.64□□□□□ -1.99
CDRT1-203ENST00000395667 LCE3DQ9BYE3 92 aa2.61□□□□□ -1.99
CDRT1-203ENST00000395667 LCE4AQ5TA78 99 aa2.61□□□□□ -1.99
CDRT1-203ENST00000395667 SPRR2DP22532 72 aa2.59□□□□□ -2
CDRT1-203ENST00000395667 LCE3EQ5T5B0 92 aa2.57□□□□□ -2
CDRT1-203ENST00000395667 LCE1DQ5T752 114 aa2.53□□□□□ -2
CDRT1-203ENST00000395667 KRTAP9-7A8MTY7 169 aa2.53□□□□□ -2
CDRT1-203ENST00000395667 KRTAP6-3Q3LI67 103 aa2.52□□□□□ -2.01
CDRT1-203ENST00000395667 KRTAP6-2Q3LI66 62 aa2.46□□□□□ -2.02
CDRT1-203ENST00000395667 LCE1FQ5T754 118 aa2.46□□□□□ -2.02
CDRT1-203ENST00000395667 KRTAP4-2Q9BYR5 136 aa2.46□□□□□ -2.02
CDRT1-203ENST00000395667 MT3P25713 68 aa2.44□□□□□ -2.02
CDRT1-203ENST00000395667 PRM1P04553 51 aa2.44□□□□□ -2.02
CDRT1-203ENST00000395667 OBSCNQ5VST9 7968 aa2.41□□□□□ -2.02
CDRT1-203ENST00000395667 KRTAP4-11Q9BYQ6 195 aa2.39□□□□□ -2.03
CDRT1-203ENST00000395667 KRTAP5-4Q6L8H1 288 aa2.34□□□□□ -2.03
CDRT1-203ENST00000395667 KRTAP2-2Q9BYT5 123 aa2.33□□□□□ -2.04
CDRT1-203ENST00000395667 NEBP20929 6669 aa2.32□□□□□ -2.04
CDRT1-203ENST00000395667 MT4P47944 62 aa2.29□□□□□ -2.04
CDRT1-203ENST00000395667 KRTAP20-2Q3LI61 65 aa2.22□□□□□ -2.05
CDRT1-203ENST00000395667 KRTAP5-3Q6L8H2 238 aa2.22□□□□□ -2.05
CDRT1-203ENST00000395667 LCE1EQ5T753 118 aa2.2□□□□□ -2.06
CDRT1-203ENST00000395667 KRTAP5-2Q701N4 177 aa2.18□□□□□ -2.06
CDRT1-203ENST00000395667 HMCN1Q96RW7 5635 aa2.17□□□□□ -2.06
CDRT1-203ENST00000395667 KRTAP20-1Q3LI63 56 aa2.1□□□□□ -2.07
CDRT1-203ENST00000395667 MUC5ACP98088 5654 aa2.05□□□□□ -2.08
CDRT1-203ENST00000395667 LCE1BQ5T7P3 118 aa2□□□□□ -2.09
CDRT1-203ENST00000395667 MUC19Q7Z5P9 8384 aa1.99□□□□□ -2.09
CDRT1-203ENST00000395667 GPR98Q8WXG9 6306 aa1.89□□□□□ -2.11
CDRT1-203ENST00000395667 KRTAP5-10Q6L8G5 202 aa1.89□□□□□ -2.11
CDRT1-203ENST00000395667 LCE1CQ5T751 118 aa1.87□□□□□ -2.11
CDRT1-203ENST00000395667 KRTAP5-1Q6L8H4 278 aa1.86□□□□□ -2.11
CDRT1-203ENST00000395667 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.75□□□□□ -2.13
CDRT1-203ENST00000395667 KRTAP5-8O75690 187 aa1.75□□□□□ -2.13
CDRT1-203ENST00000395667 KRTAP21-2Q3LI59 83 aa1.75□□□□□ -2.13
CDRT1-203ENST00000395667 AHNAK2Q8IVF2 5795 aa1.72□□□□□ -2.13
CDRT1-203ENST00000395667 KRTAP5-7Q6L8G8 165 aa1.7□□□□□ -2.14
CDRT1-203ENST00000395667 KRTAP5-11Q6L8G4 156 aa1.66□□□□□ -2.14
CDRT1-203ENST00000395667 MUC5BQ9HC84 5762 aaPredicted RBP1.65□□□□□ -2.15
CDRT1-203ENST00000395667 KRTAP4-4Q9BYR3 166 aa1.63□□□□□ -2.15
CDRT1-203ENST00000395667 AHNAKQ09666 5890 aaKnown RBP1.53□□□□□ -2.16
CDRT1-203ENST00000395667 KRTAP21-1Q3LI58 79 aa1.5□□□□□ -2.17
CDRT1-203ENST00000395667 PHGR1C9JFL3 82 aa1.4□□□□□ -2.19
CDRT1-203ENST00000395667 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 39.3 ms