RNA–Protein interactions for RNA: ENST00000395549.3

ATG13-202, Transcript of autophagy related 13, humanhuman

TSL 5

Gene ATG13, Length 937 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-202ENST00000395549 TMEM258P61165 79 aa5.88□□□□□ -1.47
ATG13-202ENST00000395549 PP632Q6XCG6 107 aa5.88□□□□□ -1.47
ATG13-202ENST00000395549 MT1LQ93083 61 aa5.85□□□□□ -1.47
ATG13-202ENST00000395549 MT1MQ8N339 61 aa5.83□□□□□ -1.48
ATG13-202ENST00000395549 LOC100996750A0A140TA64 210 aa5.8□□□□□ -1.48
ATG13-202ENST00000395549 UQCR11O14957 56 aa5.8□□□□□ -1.48
ATG13-202ENST00000395549 KRTAP4-6Q9BYQ5 205 aa5.8□□□□□ -1.48
ATG13-202ENST00000395549 KRTAP4-9Q9BYQ8 210 aa5.8□□□□□ -1.48
ATG13-202ENST00000395549 KRTAP4-3Q9BYR4 195 aa5.71□□□□□ -1.5
ATG13-202ENST00000395549 GPR98Q8WXG9 6306 aa5.7□□□□□ -1.5
ATG13-202ENST00000395549 MIR22HGQ0VDD5 57 aa5.68□□□□□ -1.5
ATG13-202ENST00000395549 LCE1DQ5T752 114 aa5.67□□□□□ -1.5
ATG13-202ENST00000395549 KRTAP12-3P60328 96 aa5.66□□□□□ -1.5
ATG13-202ENST00000395549 LCE4AQ5TA78 99 aa5.66□□□□□ -1.5
ATG13-202ENST00000395549 MT4P47944 62 aa5.61□□□□□ -1.51
ATG13-202ENST00000395549 HMCN1Q96RW7 5635 aa5.6□□□□□ -1.51
ATG13-202ENST00000395549 PSPHP1O15172 72 aa5.58□□□□□ -1.52
ATG13-202ENST00000395549 KRTAP25-1Q3LHN0 102 aa5.58□□□□□ -1.52
ATG13-202ENST00000395549 KRTAP4-7Q9BYR0 210 aa5.58□□□□□ -1.52
ATG13-202ENST00000395549 K7ERS5 55 aa5.57□□□□□ -1.52
ATG13-202ENST00000395549 V9GYY9 64 aa5.57□□□□□ -1.52
ATG13-202ENST00000395549 KRTAP5-4Q6L8H1 288 aa5.54□□□□□ -1.52
ATG13-202ENST00000395549 Q1T7F1 81 aa5.52□□□□□ -1.53
ATG13-202ENST00000395549 KRTAP15-1Q3LI76 137 aa5.52□□□□□ -1.53
ATG13-202ENST00000395549 PRAC1Q96KF2 57 aa5.51□□□□□ -1.53
ATG13-202ENST00000395549 AHNAK2Q8IVF2 5795 aa5.45□□□□□ -1.54
ATG13-202ENST00000395549 A6NED7 52 aa5.39□□□□□ -1.55
ATG13-202ENST00000395549 KRTAP5-5Q701N2 237 aaPredicted RBP5.33□□□□□ -1.56
ATG13-202ENST00000395549 RPS28P62857 69 aaKnown RBP5.3□□□□□ -1.56
ATG13-202ENST00000395549 CDC42SE1Q9NRR8 79 aa5.28□□□□□ -1.56
ATG13-202ENST00000395549 KRTAP20-2Q3LI61 65 aa5.25□□□□□ -1.57
ATG13-202ENST00000395549 KRTAP5-10Q6L8G5 202 aa5.24□□□□□ -1.57
ATG13-202ENST00000395549 KRTAP4-12Q9BQ66 201 aa5.24□□□□□ -1.57
ATG13-202ENST00000395549 LCE3CQ5T5A8 94 aa5.21□□□□□ -1.58
ATG13-202ENST00000395549 SPRR5A0A1B0GTR4 108 aa5.2□□□□□ -1.58
ATG13-202ENST00000395549 KRTAP12-4P60329 112 aa5.2□□□□□ -1.58
ATG13-202ENST00000395549 ROMO1P60602 79 aa5.19□□□□□ -1.58
ATG13-202ENST00000395549 SYNE1Q8NF91 8797 aaKnown RBP5.15□□□□□ -1.58
ATG13-202ENST00000395549 KRTAP9-4Q9BYQ2 154 aa5.15□□□□□ -1.59
ATG13-202ENST00000395549 KRTAP5-3Q6L8H2 238 aa5.14□□□□□ -1.59
ATG13-202ENST00000395549 KRTAP5-7Q6L8G8 165 aa5.04□□□□□ -1.6
ATG13-202ENST00000395549 NDUFAF8A1L188 74 aa5.02□□□□□ -1.61
ATG13-202ENST00000395549 KRTAP9-9Q9BYP9 154 aa5.01□□□□□ -1.61
ATG13-202ENST00000395549 MT1AP04731 61 aa4.98□□□□□ -1.61
ATG13-202ENST00000395549 KRTAP6-1Q3LI64 71 aa4.96□□□□□ -1.62
ATG13-202ENST00000395549 KRTAP9-6A8MVA2 160 aa4.92□□□□□ -1.62
ATG13-202ENST00000395549 KRTAP5-2Q701N4 177 aa4.86□□□□□ -1.63
ATG13-202ENST00000395549 KRTAP4-11Q9BYQ6 195 aa4.78□□□□□ -1.64
ATG13-202ENST00000395549 KRTAP6-2Q3LI66 62 aa4.73□□□□□ -1.65
ATG13-202ENST00000395549 BRK1Q8WUW1 75 aa4.72□□□□□ -1.65
ATG13-202ENST00000395549 PRO0628Q9UI54 55 aa4.72□□□□□ -1.65
ATG13-202ENST00000395549 KRTAP5-8O75690 187 aa4.62□□□□□ -1.67
ATG13-202ENST00000395549 OBSCNQ5VST9 7968 aa4.6□□□□□ -1.67
ATG13-202ENST00000395549 MT3P25713 68 aa4.58□□□□□ -1.68
ATG13-202ENST00000395549 KRTAP4-2Q9BYR5 136 aa4.53□□□□□ -1.68
ATG13-202ENST00000395549 AHNAKQ09666 5890 aaKnown RBP4.46□□□□□ -1.7
ATG13-202ENST00000395549 MUC5BQ9HC84 5762 aaPredicted RBP4.45□□□□□ -1.7
ATG13-202ENST00000395549 PMAIP1Q13794 54 aa4.43□□□□□ -1.7
ATG13-202ENST00000395549 MUC5ACP98088 5654 aa4.41□□□□□ -1.7
ATG13-202ENST00000395549 LUZP6Q538Z0 58 aa4.41□□□□□ -1.7
ATG13-202ENST00000395549 KRTAP5-1Q6L8H4 278 aa4.36□□□□□ -1.71
ATG13-202ENST00000395549 LCE1EQ5T753 118 aa4.16□□□□□ -1.74
ATG13-202ENST00000395549 KTN1-AS1Q86SY8 53 aa4.1□□□□□ -1.75
ATG13-202ENST00000395549 LCE1FQ5T754 118 aa4.04□□□□□ -1.76
ATG13-202ENST00000395549 LCE1BQ5T7P3 118 aa3.96□□□□□ -1.78
ATG13-202ENST00000395549 LCE1CQ5T751 118 aa3.86□□□□□ -1.79
ATG13-202ENST00000395549 LCE3DQ9BYE3 92 aa3.75□□□□□ -1.81
ATG13-202ENST00000395549 LCE3EQ5T5B0 92 aa3.53□□□□□ -1.84
ATG13-202ENST00000395549 KRTAP5-11Q6L8G4 156 aa3.51□□□□□ -1.85
ATG13-202ENST00000395549 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.51□□□□□ -1.85
ATG13-202ENST00000395549 KRTAP21-2Q3LI59 83 aa3.25□□□□□ -1.89
ATG13-202ENST00000395549 PHGR1C9JFL3 82 aa3.07□□□□□ -1.92
ATG13-202ENST00000395549 KRTAP4-4Q9BYR3 166 aa3.01□□□□□ -1.93
ATG13-202ENST00000395549 INE1O15225 51 aa2.99□□□□□ -1.93
ATG13-202ENST00000395549 MUC19Q7Z5P9 8384 aa2.81□□□□□ -1.96
ATG13-202ENST00000395549 PRM1P04553 51 aa2.66□□□□□ -1.98
ATG13-202ENST00000395549 KRTAP21-1Q3LI58 79 aa2.32□□□□□ -2.04
ATG13-202ENST00000395549 MUC16Q8WXI7 14507 aa2.01□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 125.5 ms