RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 FCGBPQ9Y6R7 5405 aaPredicted RBP4.86□□□□□ -1.63
CLIP2-203ENST00000395060 KRTAP4-3Q9BYR4 195 aa4.83□□□□□ -1.64
CLIP2-203ENST00000395060 MT1LQ93083 61 aa4.82□□□□□ -1.64
CLIP2-203ENST00000395060 OBSCNQ5VST9 7968 aa4.78□□□□□ -1.64
CLIP2-203ENST00000395060 MT1EP04732 61 aa4.77□□□□□ -1.65
CLIP2-203ENST00000395060 MT1GP13640 62 aa4.73□□□□□ -1.65
CLIP2-203ENST00000395060 SYNE1Q8NF91 8797 aaKnown RBP4.72□□□□□ -1.65
CLIP2-203ENST00000395060 KRTAP19-6Q3LI70 58 aa4.71□□□□□ -1.66
CLIP2-203ENST00000395060 SYNE2Q8WXH0 6885 aaKnown RBP4.7□□□□□ -1.66
CLIP2-203ENST00000395060 MACF1Q9UPN3 7388 aaKnown RBP4.63□□□□□ -1.67
CLIP2-203ENST00000395060 KRTAP12-4P60329 112 aa4.61□□□□□ -1.67
CLIP2-203ENST00000395060 LCE2DQ5TA82 110 aaPredicted RBP4.56□□□□□ -1.68
CLIP2-203ENST00000395060 KRTAP4-9Q9BYQ8 210 aa4.52□□□□□ -1.69
CLIP2-203ENST00000395060 LCE3BQ5TA77 95 aa4.49□□□□□ -1.69
CLIP2-203ENST00000395060 MDN1Q9NU22 5596 aa4.49□□□□□ -1.69
CLIP2-203ENST00000395060 SPRR2FQ96RM1 72 aa4.48□□□□□ -1.69
CLIP2-203ENST00000395060 MT1MQ8N339 61 aa4.46□□□□□ -1.7
CLIP2-203ENST00000395060 KRTAP19-3Q7Z4W3 81 aa4.44□□□□□ -1.7
CLIP2-203ENST00000395060 KRTAP19-4Q3LI73 84 aa4.37□□□□□ -1.71
CLIP2-203ENST00000395060 KRTAP9-2Q9BYQ4 174 aa4.29□□□□□ -1.72
CLIP2-203ENST00000395060 LCE5AQ5TCM9 118 aa4.28□□□□□ -1.72
CLIP2-203ENST00000395060 KRTAP9-7A8MTY7 169 aa4.21□□□□□ -1.74
CLIP2-203ENST00000395060 KRTAP6-1Q3LI64 71 aa4.19□□□□□ -1.74
CLIP2-203ENST00000395060 LCE3DQ9BYE3 92 aa4.14□□□□□ -1.75
CLIP2-203ENST00000395060 PRM1P04553 51 aa4.13□□□□□ -1.75
CLIP2-203ENST00000395060 LCE1AQ5T7P2 110 aa4.1□□□□□ -1.75
CLIP2-203ENST00000395060 SPRR2EP22531 72 aa4.08□□□□□ -1.76
CLIP2-203ENST00000395060 SPRR2BP35325 72 aa4.08□□□□□ -1.76
CLIP2-203ENST00000395060 SPRR2AP35326 72 aa4.08□□□□□ -1.76
CLIP2-203ENST00000395060 LCE3EQ5T5B0 92 aa4.07□□□□□ -1.76
CLIP2-203ENST00000395060 KRTAP5-5Q701N2 237 aaPredicted RBP4.03□□□□□ -1.76
CLIP2-203ENST00000395060 KRTAP5-9P26371 169 aa4□□□□□ -1.77
CLIP2-203ENST00000395060 MT1AP04731 61 aa3.98□□□□□ -1.77
CLIP2-203ENST00000395060 KRTAP6-2Q3LI66 62 aa3.9□□□□□ -1.79
CLIP2-203ENST00000395060 SPRR2DP22532 72 aa3.89□□□□□ -1.79
CLIP2-203ENST00000395060 KRTAP9-6A0A140TA67 174 aa3.86□□□□□ -1.79
CLIP2-203ENST00000395060 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.83□□□□□ -1.8
CLIP2-203ENST00000395060 KRTAP2-2Q9BYT5 123 aa3.81□□□□□ -1.8
CLIP2-203ENST00000395060 LCE1EQ5T753 118 aa3.8□□□□□ -1.8
CLIP2-203ENST00000395060 KRTAP6-3Q3LI67 103 aa3.78□□□□□ -1.8
CLIP2-203ENST00000395060 KRTAP9-4Q9BYQ2 154 aa3.72□□□□□ -1.81
CLIP2-203ENST00000395060 LCE1DQ5T752 114 aa3.6□□□□□ -1.83
CLIP2-203ENST00000395060 MT3P25713 68 aa3.57□□□□□ -1.84
CLIP2-203ENST00000395060 NEBP20929 6669 aa3.57□□□□□ -1.84
CLIP2-203ENST00000395060 MT4P47944 62 aa3.54□□□□□ -1.84
CLIP2-203ENST00000395060 KRTAP4-6Q9BYQ5 205 aa3.5□□□□□ -1.85
CLIP2-203ENST00000395060 KRTAP5-4Q6L8H1 288 aa3.41□□□□□ -1.86
CLIP2-203ENST00000395060 LCE1FQ5T754 118 aa3.4□□□□□ -1.87
CLIP2-203ENST00000395060 HMCN1Q96RW7 5635 aa3.37□□□□□ -1.87
CLIP2-203ENST00000395060 MUC19Q7Z5P9 8384 aa3.3□□□□□ -1.88
CLIP2-203ENST00000395060 KRTAP20-2Q3LI61 65 aa3.3□□□□□ -1.88
CLIP2-203ENST00000395060 MUC5ACP98088 5654 aa3.23□□□□□ -1.89
CLIP2-203ENST00000395060 LCE4AQ5TA78 99 aa3.23□□□□□ -1.89
CLIP2-203ENST00000395060 KRTAP4-11Q9BYQ6 195 aa3.19□□□□□ -1.9
CLIP2-203ENST00000395060 KRTAP5-2Q701N4 177 aa3.15□□□□□ -1.91
CLIP2-203ENST00000395060 LCE1BQ5T7P3 118 aa3.14□□□□□ -1.91
CLIP2-203ENST00000395060 KRTAP20-1Q3LI63 56 aa3.12□□□□□ -1.91
CLIP2-203ENST00000395060 KRTAP5-3Q6L8H2 238 aa3.09□□□□□ -1.91
CLIP2-203ENST00000395060 KRTAP5-10Q6L8G5 202 aa2.92□□□□□ -1.94
CLIP2-203ENST00000395060 MUC5BQ9HC84 5762 aaPredicted RBP2.8□□□□□ -1.96
CLIP2-203ENST00000395060 KRTAP4-2Q9BYR5 136 aa2.77□□□□□ -1.97
CLIP2-203ENST00000395060 AHNAK2Q8IVF2 5795 aa2.77□□□□□ -1.97
CLIP2-203ENST00000395060 KRTAP5-1Q6L8H4 278 aa2.76□□□□□ -1.97
CLIP2-203ENST00000395060 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
CLIP2-203ENST00000395060 LCE1CQ5T751 118 aa2.7□□□□□ -1.98
CLIP2-203ENST00000395060 KRTAP5-8O75690 187 aa2.63□□□□□ -1.99
CLIP2-203ENST00000395060 KRTAP21-2Q3LI59 83 aa2.59□□□□□ -1.99
CLIP2-203ENST00000395060 KRTAP4-12Q9BQ66 201 aa2.54□□□□□ -2
CLIP2-203ENST00000395060 GPR98Q8WXG9 6306 aa2.53□□□□□ -2
CLIP2-203ENST00000395060 KRTAP9-9Q9BYP9 154 aa2.48□□□□□ -2.01
CLIP2-203ENST00000395060 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.46□□□□□ -2.01
CLIP2-203ENST00000395060 KRTAP21-1Q3LI58 79 aa2.42□□□□□ -2.02
CLIP2-203ENST00000395060 KRTAP5-7Q6L8G8 165 aa2.42□□□□□ -2.02
CLIP2-203ENST00000395060 KRTAP5-11Q6L8G4 156 aa2.31□□□□□ -2.04
CLIP2-203ENST00000395060 AHNAKQ09666 5890 aaKnown RBP2.06□□□□□ -2.08
CLIP2-203ENST00000395060 PHGR1C9JFL3 82 aa2.03□□□□□ -2.08
CLIP2-203ENST00000395060 MUC16Q8WXI7 14507 aa1.38□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 93.6 ms