RNA–Protein interactions for RNA: ENST00000394830.7

PBRM1-204, Transcript of polybromo 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PBRM1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-204ENST00000394830 KRTAP19-3Q7Z4W3 81 aa4.56□□□□□ -1.68
PBRM1-204ENST00000394830 KRTAP9-6A8MVA2 160 aa4.52□□□□□ -1.69
PBRM1-204ENST00000394830 KRTAP2-3P0C7H8 128 aa4.5□□□□□ -1.69
PBRM1-204ENST00000394830 KRTAP2-4Q9BYR9 128 aa4.5□□□□□ -1.69
PBRM1-204ENST00000394830 KRTAP2-1Q9BYU5 128 aa4.5□□□□□ -1.69
PBRM1-204ENST00000394830 MT1MQ8N339 61 aa4.47□□□□□ -1.69
PBRM1-204ENST00000394830 SSPOA2VEC9 5147 aa4.47□□□□□ -1.69
PBRM1-204ENST00000394830 KRTAP12-4P60329 112 aa4.43□□□□□ -1.7
PBRM1-204ENST00000394830 LCE3BQ5TA77 95 aa4.41□□□□□ -1.7
PBRM1-204ENST00000394830 KRTAP4-3Q9BYR4 195 aa4.41□□□□□ -1.7
PBRM1-204ENST00000394830 FCGBPQ9Y6R7 5405 aaPredicted RBP4.4□□□□□ -1.7
PBRM1-204ENST00000394830 LOC100996750A0A140TA64 210 aa4.39□□□□□ -1.71
PBRM1-204ENST00000394830 KMT2DO14686 5537 aa4.35□□□□□ -1.71
PBRM1-204ENST00000394830 SPRR2EP22531 72 aa4.34□□□□□ -1.71
PBRM1-204ENST00000394830 SPRR2BP35325 72 aa4.34□□□□□ -1.71
PBRM1-204ENST00000394830 SPRR2AP35326 72 aa4.34□□□□□ -1.71
PBRM1-204ENST00000394830 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.32□□□□□ -1.72
PBRM1-204ENST00000394830 MACF1Q9UPN3 7388 aaKnown RBP4.3□□□□□ -1.72
PBRM1-204ENST00000394830 SYNE2Q8WXH0 6885 aaKnown RBP4.29□□□□□ -1.72
PBRM1-204ENST00000394830 KRTAP9-7A8MTY7 169 aa4.28□□□□□ -1.72
PBRM1-204ENST00000394830 LCE3DQ9BYE3 92 aa4.21□□□□□ -1.73
PBRM1-204ENST00000394830 SPRR2DP22532 72 aa4.18□□□□□ -1.74
PBRM1-204ENST00000394830 SYNE1Q8NF91 8797 aaKnown RBP4.17□□□□□ -1.74
PBRM1-204ENST00000394830 LCE3EQ5T5B0 92 aa4.17□□□□□ -1.74
PBRM1-204ENST00000394830 LCE5AQ5TCM9 118 aa4.16□□□□□ -1.74
PBRM1-204ENST00000394830 KRTAP6-3Q3LI67 103 aa4.15□□□□□ -1.75
PBRM1-204ENST00000394830 MT1AP04731 61 aa4.1□□□□□ -1.75
PBRM1-204ENST00000394830 MUC12Q9UKN1 5478 aa4.08□□□□□ -1.76
PBRM1-204ENST00000394830 DSTQ03001 7570 aaKnown RBP4.08□□□□□ -1.76
PBRM1-204ENST00000394830 KRTAP4-9Q9BYQ8 210 aa4□□□□□ -1.77
PBRM1-204ENST00000394830 KRTAP6-1Q3LI64 71 aa3.98□□□□□ -1.77
PBRM1-204ENST00000394830 LCE1AQ5T7P2 110 aa3.97□□□□□ -1.77
PBRM1-204ENST00000394830 MT3P25713 68 aa3.92□□□□□ -1.78
PBRM1-204ENST00000394830 KRTAP5-9P26371 169 aa3.91□□□□□ -1.78
PBRM1-204ENST00000394830 MDN1Q9NU22 5596 aa3.89□□□□□ -1.79
PBRM1-204ENST00000394830 PRM1P04553 51 aa3.88□□□□□ -1.79
PBRM1-204ENST00000394830 KRTAP20-1Q3LI63 56 aa3.87□□□□□ -1.79
PBRM1-204ENST00000394830 KRTAP9-4Q9BYQ2 154 aa3.79□□□□□ -1.8
PBRM1-204ENST00000394830 NEBP20929 6669 aa3.78□□□□□ -1.8
PBRM1-204ENST00000394830 OBSCNQ5VST9 7968 aa3.77□□□□□ -1.81
PBRM1-204ENST00000394830 MT4P47944 62 aa3.73□□□□□ -1.81
PBRM1-204ENST00000394830 KRTAP2-2Q9BYT5 123 aa3.71□□□□□ -1.82
PBRM1-204ENST00000394830 KRTAP6-2Q3LI66 62 aa3.7□□□□□ -1.82
PBRM1-204ENST00000394830 KRTAP5-5Q701N2 237 aaPredicted RBP3.53□□□□□ -1.84
PBRM1-204ENST00000394830 LCE4AQ5TA78 99 aa3.48□□□□□ -1.85
PBRM1-204ENST00000394830 LCE1DQ5T752 114 aa3.42□□□□□ -1.86
PBRM1-204ENST00000394830 LCE1BQ5T7P3 118 aa3.35□□□□□ -1.87
PBRM1-204ENST00000394830 KRTAP4-6Q9BYQ5 205 aa3.35□□□□□ -1.87
PBRM1-204ENST00000394830 KRTAP20-2Q3LI61 65 aa3.22□□□□□ -1.89
PBRM1-204ENST00000394830 KRTAP5-4Q6L8H1 288 aa3.16□□□□□ -1.9
PBRM1-204ENST00000394830 GPR98Q8WXG9 6306 aa3.14□□□□□ -1.91
PBRM1-204ENST00000394830 HMCN1Q96RW7 5635 aa3.13□□□□□ -1.91
PBRM1-204ENST00000394830 LCE1EQ5T753 118 aa2.93□□□□□ -1.94
PBRM1-204ENST00000394830 KRTAP5-3Q6L8H2 238 aa2.91□□□□□ -1.94
PBRM1-204ENST00000394830 KRTAP5-2Q701N4 177 aa2.91□□□□□ -1.94
PBRM1-204ENST00000394830 KRTAP4-11Q9BYQ6 195 aa2.9□□□□□ -1.95
PBRM1-204ENST00000394830 AHNAK2Q8IVF2 5795 aa2.8□□□□□ -1.96
PBRM1-204ENST00000394830 MUC5ACP98088 5654 aa2.8□□□□□ -1.96
PBRM1-204ENST00000394830 KRTAP9-9Q9BYP9 154 aa2.79□□□□□ -1.96
PBRM1-204ENST00000394830 KRTAP4-12Q9BQ66 201 aa2.73□□□□□ -1.97
PBRM1-204ENST00000394830 LCE1CQ5T751 118 aa2.69□□□□□ -1.98
PBRM1-204ENST00000394830 KRTAP5-10Q6L8G5 202 aa2.67□□□□□ -1.98
PBRM1-204ENST00000394830 MUC19Q7Z5P9 8384 aa2.67□□□□□ -1.98
PBRM1-204ENST00000394830 KRTAP5-8O75690 187 aa2.64□□□□□ -1.99
PBRM1-204ENST00000394830 KRTAP4-2Q9BYR5 136 aa2.58□□□□□ -2
PBRM1-204ENST00000394830 KRTAP4-4Q9BYR3 166 aa2.53□□□□□ -2
PBRM1-204ENST00000394830 LCE1FQ5T754 118 aa2.5□□□□□ -2.01
PBRM1-204ENST00000394830 KRTAP5-1Q6L8H4 278 aa2.49□□□□□ -2.01
PBRM1-204ENST00000394830 KRTAP5-7Q6L8G8 165 aa2.45□□□□□ -2.02
PBRM1-204ENST00000394830 MUC5BQ9HC84 5762 aaPredicted RBP2.42□□□□□ -2.02
PBRM1-204ENST00000394830 KRTAP21-2Q3LI59 83 aa2.39□□□□□ -2.03
PBRM1-204ENST00000394830 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.37□□□□□ -2.03
PBRM1-204ENST00000394830 AHNAKQ09666 5890 aaKnown RBP2.35□□□□□ -2.03
PBRM1-204ENST00000394830 KRTAP5-11Q6L8G4 156 aa2.31□□□□□ -2.04
PBRM1-204ENST00000394830 KRTAP21-1Q3LI58 79 aa2.14□□□□□ -2.07
PBRM1-204ENST00000394830 PHGR1C9JFL3 82 aa1.95□□□□□ -2.1
PBRM1-204ENST00000394830 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 108.7 ms