RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 SYNE1Q8NF91 8797 aaKnown RBP5.4□□□□□ -1.54
PTBP1-204ENST00000394601 KRTAP19-6Q3LI70 58 aa5.4□□□□□ -1.55
PTBP1-204ENST00000394601 MT1LQ93083 61 aa5.39□□□□□ -1.55
PTBP1-204ENST00000394601 FCGBPQ9Y6R7 5405 aaPredicted RBP5.36□□□□□ -1.55
PTBP1-204ENST00000394601 KRTAP19-4Q3LI73 84 aa5.28□□□□□ -1.56
PTBP1-204ENST00000394601 KRTAP2-3P0C7H8 128 aa5.26□□□□□ -1.57
PTBP1-204ENST00000394601 KRTAP2-4Q9BYR9 128 aa5.26□□□□□ -1.57
PTBP1-204ENST00000394601 KRTAP2-1Q9BYU5 128 aa5.26□□□□□ -1.57
PTBP1-204ENST00000394601 MUC12Q9UKN1 5478 aa5.2□□□□□ -1.58
PTBP1-204ENST00000394601 LOC100996750A0A140TA64 210 aa5.15□□□□□ -1.58
PTBP1-204ENST00000394601 KRTAP12-4P60329 112 aa5.13□□□□□ -1.59
PTBP1-204ENST00000394601 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.12□□□□□ -1.59
PTBP1-204ENST00000394601 KRTAP4-3Q9BYR4 195 aa5.11□□□□□ -1.59
PTBP1-204ENST00000394601 MT1MQ8N339 61 aa5.04□□□□□ -1.6
PTBP1-204ENST00000394601 KRTAP19-3Q7Z4W3 81 aa5.03□□□□□ -1.6
PTBP1-204ENST00000394601 MT1GP13640 62 aa5.01□□□□□ -1.61
PTBP1-204ENST00000394601 KRTAP9-7A8MTY7 169 aa4.99□□□□□ -1.61
PTBP1-204ENST00000394601 LCE5AQ5TCM9 118 aa4.93□□□□□ -1.62
PTBP1-204ENST00000394601 KRTAP4-9Q9BYQ8 210 aa4.93□□□□□ -1.62
PTBP1-204ENST00000394601 MACF1Q9UPN3 7388 aaKnown RBP4.91□□□□□ -1.62
PTBP1-204ENST00000394601 KRTAP6-3Q3LI67 103 aa4.88□□□□□ -1.63
PTBP1-204ENST00000394601 LCE3BQ5TA77 95 aa4.87□□□□□ -1.63
PTBP1-204ENST00000394601 SYNE2Q8WXH0 6885 aaKnown RBP4.83□□□□□ -1.64
PTBP1-204ENST00000394601 SPRR2FQ96RM1 72 aa4.81□□□□□ -1.64
PTBP1-204ENST00000394601 MDN1Q9NU22 5596 aa4.81□□□□□ -1.64
PTBP1-204ENST00000394601 KRTAP5-9P26371 169 aa4.74□□□□□ -1.65
PTBP1-204ENST00000394601 PRM1P04553 51 aa4.62□□□□□ -1.67
PTBP1-204ENST00000394601 LCE1AQ5T7P2 110 aa4.61□□□□□ -1.67
PTBP1-204ENST00000394601 KRTAP9-4Q9BYQ2 154 aa4.59□□□□□ -1.68
PTBP1-204ENST00000394601 KRTAP6-1Q3LI64 71 aa4.58□□□□□ -1.68
PTBP1-204ENST00000394601 KRTAP5-5Q701N2 237 aaPredicted RBP4.57□□□□□ -1.68
PTBP1-204ENST00000394601 LCE4AQ5TA78 99 aa4.55□□□□□ -1.68
PTBP1-204ENST00000394601 NEBP20929 6669 aa4.55□□□□□ -1.68
PTBP1-204ENST00000394601 MT1AP04731 61 aa4.49□□□□□ -1.69
PTBP1-204ENST00000394601 LCE3DQ9BYE3 92 aa4.48□□□□□ -1.69
PTBP1-204ENST00000394601 SPRR2EP22531 72 aa4.44□□□□□ -1.7
PTBP1-204ENST00000394601 SPRR2BP35325 72 aa4.44□□□□□ -1.7
PTBP1-204ENST00000394601 SPRR2AP35326 72 aa4.44□□□□□ -1.7
PTBP1-204ENST00000394601 KRTAP20-1Q3LI63 56 aa4.41□□□□□ -1.7
PTBP1-204ENST00000394601 LCE3EQ5T5B0 92 aa4.41□□□□□ -1.7
PTBP1-204ENST00000394601 KRTAP9-9Q9BYP9 154 aa4.41□□□□□ -1.7
PTBP1-204ENST00000394601 LCE1FQ5T754 118 aa4.36□□□□□ -1.71
PTBP1-204ENST00000394601 SPRR2DP22532 72 aa4.3□□□□□ -1.72
PTBP1-204ENST00000394601 KRTAP6-2Q3LI66 62 aa4.23□□□□□ -1.73
PTBP1-204ENST00000394601 KRTAP2-2Q9BYT5 123 aa4.22□□□□□ -1.73
PTBP1-204ENST00000394601 LCE1EQ5T753 118 aa4.04□□□□□ -1.76
PTBP1-204ENST00000394601 KRTAP5-4Q6L8H1 288 aa4.04□□□□□ -1.76
PTBP1-204ENST00000394601 MUC19Q7Z5P9 8384 aa4□□□□□ -1.77
PTBP1-204ENST00000394601 MT3P25713 68 aa3.99□□□□□ -1.77
PTBP1-204ENST00000394601 KRTAP4-6Q9BYQ5 205 aa3.84□□□□□ -1.8
PTBP1-204ENST00000394601 LCE1DQ5T752 114 aa3.8□□□□□ -1.8
PTBP1-204ENST00000394601 KRTAP5-2Q701N4 177 aa3.77□□□□□ -1.81
PTBP1-204ENST00000394601 HMCN1Q96RW7 5635 aa3.73□□□□□ -1.81
PTBP1-204ENST00000394601 KRTAP20-2Q3LI61 65 aa3.73□□□□□ -1.81
PTBP1-204ENST00000394601 MT4P47944 62 aa3.69□□□□□ -1.82
PTBP1-204ENST00000394601 KRTAP5-3Q6L8H2 238 aa3.62□□□□□ -1.83
PTBP1-204ENST00000394601 KRTAP4-11Q9BYQ6 195 aa3.57□□□□□ -1.84
PTBP1-204ENST00000394601 MUC5ACP98088 5654 aa3.5□□□□□ -1.85
PTBP1-204ENST00000394601 AHNAK2Q8IVF2 5795 aa3.5□□□□□ -1.85
PTBP1-204ENST00000394601 GPR98Q8WXG9 6306 aa3.48□□□□□ -1.85
PTBP1-204ENST00000394601 KRTAP5-10Q6L8G5 202 aa3.47□□□□□ -1.85
PTBP1-204ENST00000394601 LCE1BQ5T7P3 118 aa3.39□□□□□ -1.87
PTBP1-204ENST00000394601 KRTAP4-12Q9BQ66 201 aa3.39□□□□□ -1.87
PTBP1-204ENST00000394601 KRTAP5-7Q6L8G8 165 aa3.35□□□□□ -1.87
PTBP1-204ENST00000394601 KRTAP5-1Q6L8H4 278 aa3.24□□□□□ -1.89
PTBP1-204ENST00000394601 KRTAP4-2Q9BYR5 136 aa3.22□□□□□ -1.89
PTBP1-204ENST00000394601 LCE1CQ5T751 118 aa3.18□□□□□ -1.9
PTBP1-204ENST00000394601 KRTAP5-8O75690 187 aa3.12□□□□□ -1.91
PTBP1-204ENST00000394601 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.04□□□□□ -1.92
PTBP1-204ENST00000394601 KRTAP21-2Q3LI59 83 aa3.01□□□□□ -1.93
PTBP1-204ENST00000394601 KRTAP4-4Q9BYR3 166 aa3□□□□□ -1.93
PTBP1-204ENST00000394601 MUC5BQ9HC84 5762 aaPredicted RBP2.83□□□□□ -1.96
PTBP1-204ENST00000394601 AHNAKQ09666 5890 aaKnown RBP2.81□□□□□ -1.96
PTBP1-204ENST00000394601 KRTAP5-11Q6L8G4 156 aa2.73□□□□□ -1.97
PTBP1-204ENST00000394601 KRTAP21-1Q3LI58 79 aa2.59□□□□□ -1.99
PTBP1-204ENST00000394601 PHGR1C9JFL3 82 aa2.38□□□□□ -2.03
PTBP1-204ENST00000394601 MUC16Q8WXI7 14507 aa1.61□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 13.1 ms