RNA–Protein interactions for RNA: ENST00000394555.6

EFEMP1-202, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFEMP1, Length 3,024 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-202ENST00000394555 CRCT1Q9UGL9 99 aa5.34□□□□□ -1.56
EFEMP1-202ENST00000394555 MT1GP13640 62 aa5.31□□□□□ -1.56
EFEMP1-202ENST00000394555 SSPOA2VEC9 5147 aa5.27□□□□□ -1.57
EFEMP1-202ENST00000394555 KRTAP12-4P60329 112 aa5.26□□□□□ -1.57
EFEMP1-202ENST00000394555 MUC12Q9UKN1 5478 aa5.25□□□□□ -1.57
EFEMP1-202ENST00000394555 LCE2DQ5TA82 110 aaPredicted RBP5.23□□□□□ -1.57
EFEMP1-202ENST00000394555 DSTQ03001 7570 aaKnown RBP5.21□□□□□ -1.58
EFEMP1-202ENST00000394555 FCGBPQ9Y6R7 5405 aaPredicted RBP5.21□□□□□ -1.58
EFEMP1-202ENST00000394555 MT1MQ8N339 61 aa5.11□□□□□ -1.59
EFEMP1-202ENST00000394555 KRTAP19-3Q7Z4W3 81 aa5.05□□□□□ -1.6
EFEMP1-202ENST00000394555 LCE3BQ5TA77 95 aa5.02□□□□□ -1.61
EFEMP1-202ENST00000394555 KRTAP19-6Q3LI70 58 aa5.02□□□□□ -1.61
EFEMP1-202ENST00000394555 KRTAP4-9Q9BYQ8 210 aa5.01□□□□□ -1.61
EFEMP1-202ENST00000394555 SYNE1Q8NF91 8797 aaKnown RBP4.97□□□□□ -1.61
EFEMP1-202ENST00000394555 SPRR2FQ96RM1 72 aa4.83□□□□□ -1.64
EFEMP1-202ENST00000394555 LCE5AQ5TCM9 118 aa4.81□□□□□ -1.64
EFEMP1-202ENST00000394555 KRTAP9-2Q9BYQ4 174 aa4.79□□□□□ -1.64
EFEMP1-202ENST00000394555 KRTAP6-1Q3LI64 71 aa4.76□□□□□ -1.65
EFEMP1-202ENST00000394555 LCE3DQ9BYE3 92 aa4.75□□□□□ -1.65
EFEMP1-202ENST00000394555 KRTAP9-7A8MTY7 169 aa4.74□□□□□ -1.65
EFEMP1-202ENST00000394555 SYNE2Q8WXH0 6885 aaKnown RBP4.73□□□□□ -1.65
EFEMP1-202ENST00000394555 MT1AP04731 61 aa4.72□□□□□ -1.65
EFEMP1-202ENST00000394555 PRM1P04553 51 aa4.7□□□□□ -1.66
EFEMP1-202ENST00000394555 LCE3EQ5T5B0 92 aa4.7□□□□□ -1.66
EFEMP1-202ENST00000394555 OBSCNQ5VST9 7968 aa4.65□□□□□ -1.66
EFEMP1-202ENST00000394555 MACF1Q9UPN3 7388 aaKnown RBP4.65□□□□□ -1.67
EFEMP1-202ENST00000394555 KRTAP5-5Q701N2 237 aaPredicted RBP4.64□□□□□ -1.67
EFEMP1-202ENST00000394555 MDN1Q9NU22 5596 aa4.59□□□□□ -1.67
EFEMP1-202ENST00000394555 KRTAP6-2Q3LI66 62 aa4.44□□□□□ -1.7
EFEMP1-202ENST00000394555 LCE1AQ5T7P2 110 aa4.35□□□□□ -1.71
EFEMP1-202ENST00000394555 KRTAP9-4Q9BYQ2 154 aa4.31□□□□□ -1.72
EFEMP1-202ENST00000394555 KRTAP9-6A0A140TA67 174 aa4.26□□□□□ -1.73
EFEMP1-202ENST00000394555 SPRR2EP22531 72 aa4.25□□□□□ -1.73
EFEMP1-202ENST00000394555 SPRR2BP35325 72 aa4.25□□□□□ -1.73
EFEMP1-202ENST00000394555 SPRR2AP35326 72 aa4.25□□□□□ -1.73
EFEMP1-202ENST00000394555 KRTAP6-3Q3LI67 103 aa4.2□□□□□ -1.74
EFEMP1-202ENST00000394555 KRTAP5-9P26371 169 aa4.14□□□□□ -1.75
EFEMP1-202ENST00000394555 MT3P25713 68 aa4.13□□□□□ -1.75
EFEMP1-202ENST00000394555 KRTAP2-2Q9BYT5 123 aa4.13□□□□□ -1.75
EFEMP1-202ENST00000394555 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.1□□□□□ -1.75
EFEMP1-202ENST00000394555 SPRR2DP22532 72 aa4.04□□□□□ -1.76
EFEMP1-202ENST00000394555 LCE1EQ5T753 118 aa4□□□□□ -1.77
EFEMP1-202ENST00000394555 KRTAP4-6Q9BYQ5 205 aa3.97□□□□□ -1.77
EFEMP1-202ENST00000394555 NEBP20929 6669 aa3.85□□□□□ -1.79
EFEMP1-202ENST00000394555 LCE1DQ5T752 114 aa3.77□□□□□ -1.81
EFEMP1-202ENST00000394555 MT4P47944 62 aa3.68□□□□□ -1.82
EFEMP1-202ENST00000394555 KRTAP5-4Q6L8H1 288 aa3.65□□□□□ -1.83
EFEMP1-202ENST00000394555 MUC5ACP98088 5654 aa3.63□□□□□ -1.83
EFEMP1-202ENST00000394555 KRTAP4-11Q9BYQ6 195 aa3.56□□□□□ -1.84
EFEMP1-202ENST00000394555 KRTAP20-2Q3LI61 65 aa3.52□□□□□ -1.85
EFEMP1-202ENST00000394555 MUC19Q7Z5P9 8384 aa3.51□□□□□ -1.85
EFEMP1-202ENST00000394555 LCE1FQ5T754 118 aa3.5□□□□□ -1.85
EFEMP1-202ENST00000394555 KRTAP5-2Q701N4 177 aa3.47□□□□□ -1.85
EFEMP1-202ENST00000394555 LCE1BQ5T7P3 118 aa3.45□□□□□ -1.86
EFEMP1-202ENST00000394555 HMCN1Q96RW7 5635 aa3.44□□□□□ -1.86
EFEMP1-202ENST00000394555 KRTAP5-10Q6L8G5 202 aa3.38□□□□□ -1.87
EFEMP1-202ENST00000394555 KRTAP20-1Q3LI63 56 aa3.35□□□□□ -1.87
EFEMP1-202ENST00000394555 LCE4AQ5TA78 99 aa3.33□□□□□ -1.88
EFEMP1-202ENST00000394555 KRTAP5-3Q6L8H2 238 aa3.27□□□□□ -1.89
EFEMP1-202ENST00000394555 KRTAP4-12Q9BQ66 201 aa3.23□□□□□ -1.89
EFEMP1-202ENST00000394555 KRTAP5-1Q6L8H4 278 aa3.22□□□□□ -1.89
EFEMP1-202ENST00000394555 KRTAP9-9Q9BYP9 154 aa3.14□□□□□ -1.91
EFEMP1-202ENST00000394555 KRTAP4-2Q9BYR5 136 aa3.11□□□□□ -1.91
EFEMP1-202ENST00000394555 LCE1CQ5T751 118 aa3.05□□□□□ -1.92
EFEMP1-202ENST00000394555 KRTAP21-2Q3LI59 83 aa3□□□□□ -1.93
EFEMP1-202ENST00000394555 KRTAP4-4Q9BYR3 166 aa2.94□□□□□ -1.94
EFEMP1-202ENST00000394555 KRTAP21-1Q3LI58 79 aa2.89□□□□□ -1.95
EFEMP1-202ENST00000394555 AHNAK2Q8IVF2 5795 aa2.87□□□□□ -1.95
EFEMP1-202ENST00000394555 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.84□□□□□ -1.95
EFEMP1-202ENST00000394555 GPR98Q8WXG9 6306 aa2.75□□□□□ -1.97
EFEMP1-202ENST00000394555 KRTAP5-8O75690 187 aa2.72□□□□□ -1.97
EFEMP1-202ENST00000394555 MUC5BQ9HC84 5762 aaPredicted RBP2.65□□□□□ -1.99
EFEMP1-202ENST00000394555 KRTAP5-7Q6L8G8 165 aa2.6□□□□□ -1.99
EFEMP1-202ENST00000394555 KRTAP5-11Q6L8G4 156 aa2.57□□□□□ -2
EFEMP1-202ENST00000394555 AHNAKQ09666 5890 aaKnown RBP2.42□□□□□ -2.02
EFEMP1-202ENST00000394555 PHGR1C9JFL3 82 aa2.25□□□□□ -2.05
EFEMP1-202ENST00000394555 MUC16Q8WXI7 14507 aa1.59□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 136.4 ms