RNA–Protein interactions for RNA: ENST00000394435.2

PRDM5-202, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,492 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-202ENST00000394435 LCE2DQ5TA82 110 aaPredicted RBP5.58□□□□□ -1.52
PRDM5-202ENST00000394435 KRTAP9-2Q9BYQ4 174 aa5.55□□□□□ -1.52
PRDM5-202ENST00000394435 KRTAP4-3Q9BYR4 195 aa5.53□□□□□ -1.52
PRDM5-202ENST00000394435 FCGBPQ9Y6R7 5405 aaPredicted RBP5.47□□□□□ -1.53
PRDM5-202ENST00000394435 LOC100996750A0A140TA64 210 aa5.47□□□□□ -1.53
PRDM5-202ENST00000394435 KRTAP19-3Q7Z4W3 81 aa5.45□□□□□ -1.54
PRDM5-202ENST00000394435 MT1MQ8N339 61 aa5.44□□□□□ -1.54
PRDM5-202ENST00000394435 MT1GP13640 62 aa5.43□□□□□ -1.54
PRDM5-202ENST00000394435 MUC12Q9UKN1 5478 aa5.4□□□□□ -1.54
PRDM5-202ENST00000394435 CRCT1Q9UGL9 99 aa5.32□□□□□ -1.56
PRDM5-202ENST00000394435 SPRR2FQ96RM1 72 aa5.31□□□□□ -1.56
PRDM5-202ENST00000394435 MACF1Q9UPN3 7388 aaKnown RBP5.28□□□□□ -1.56
PRDM5-202ENST00000394435 LCE5AQ5TCM9 118 aa5.26□□□□□ -1.57
PRDM5-202ENST00000394435 SYNE2Q8WXH0 6885 aaKnown RBP5.19□□□□□ -1.58
PRDM5-202ENST00000394435 KRTAP9-6A0A140TA67 174 aa5.11□□□□□ -1.59
PRDM5-202ENST00000394435 DSTQ03001 7570 aaKnown RBP5.1□□□□□ -1.59
PRDM5-202ENST00000394435 KRTAP4-6Q9BYQ5 205 aa5.09□□□□□ -1.59
PRDM5-202ENST00000394435 LCE3BQ5TA77 95 aa4.99□□□□□ -1.61
PRDM5-202ENST00000394435 LCE1AQ5T7P2 110 aa4.95□□□□□ -1.62
PRDM5-202ENST00000394435 KRTAP12-4P60329 112 aa4.95□□□□□ -1.62
PRDM5-202ENST00000394435 MDN1Q9NU22 5596 aa4.93□□□□□ -1.62
PRDM5-202ENST00000394435 KRTAP6-1Q3LI64 71 aa4.93□□□□□ -1.62
PRDM5-202ENST00000394435 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.92□□□□□ -1.62
PRDM5-202ENST00000394435 KRTAP5-9P26371 169 aa4.92□□□□□ -1.62
PRDM5-202ENST00000394435 KRTAP4-9Q9BYQ8 210 aa4.88□□□□□ -1.63
PRDM5-202ENST00000394435 MT1AP04731 61 aa4.87□□□□□ -1.63
PRDM5-202ENST00000394435 SPRR2EP22531 72 aa4.85□□□□□ -1.63
PRDM5-202ENST00000394435 SPRR2BP35325 72 aa4.85□□□□□ -1.63
PRDM5-202ENST00000394435 SPRR2AP35326 72 aa4.85□□□□□ -1.63
PRDM5-202ENST00000394435 KRTAP5-5Q701N2 237 aaPredicted RBP4.81□□□□□ -1.64
PRDM5-202ENST00000394435 SYNE1Q8NF91 8797 aaKnown RBP4.73□□□□□ -1.65
PRDM5-202ENST00000394435 KRTAP6-3Q3LI67 103 aa4.69□□□□□ -1.66
PRDM5-202ENST00000394435 KRTAP9-7A8MTY7 169 aa4.68□□□□□ -1.66
PRDM5-202ENST00000394435 LCE3DQ9BYE3 92 aa4.67□□□□□ -1.66
PRDM5-202ENST00000394435 SPRR2DP22532 72 aa4.65□□□□□ -1.67
PRDM5-202ENST00000394435 LCE3EQ5T5B0 92 aa4.6□□□□□ -1.67
PRDM5-202ENST00000394435 KRTAP9-4Q9BYQ2 154 aa4.6□□□□□ -1.67
PRDM5-202ENST00000394435 NEBP20929 6669 aa4.51□□□□□ -1.69
PRDM5-202ENST00000394435 KRTAP6-2Q3LI66 62 aa4.44□□□□□ -1.7
PRDM5-202ENST00000394435 PRM1P04553 51 aa4.37□□□□□ -1.71
PRDM5-202ENST00000394435 MT3P25713 68 aa4.37□□□□□ -1.71
PRDM5-202ENST00000394435 KRTAP5-4Q6L8H1 288 aa4.26□□□□□ -1.73
PRDM5-202ENST00000394435 OBSCNQ5VST9 7968 aa4.16□□□□□ -1.74
PRDM5-202ENST00000394435 MT4P47944 62 aa4.11□□□□□ -1.75
PRDM5-202ENST00000394435 KRTAP20-1Q3LI63 56 aa4.09□□□□□ -1.75
PRDM5-202ENST00000394435 KRTAP5-3Q6L8H2 238 aa4.07□□□□□ -1.76
PRDM5-202ENST00000394435 KRTAP2-2Q9BYT5 123 aa4.03□□□□□ -1.76
PRDM5-202ENST00000394435 KRTAP20-2Q3LI61 65 aa4.01□□□□□ -1.77
PRDM5-202ENST00000394435 LCE4AQ5TA78 99 aa4.01□□□□□ -1.77
PRDM5-202ENST00000394435 KRTAP5-2Q701N4 177 aa3.97□□□□□ -1.77
PRDM5-202ENST00000394435 KRTAP9-9Q9BYP9 154 aa3.91□□□□□ -1.78
PRDM5-202ENST00000394435 HMCN1Q96RW7 5635 aa3.91□□□□□ -1.78
PRDM5-202ENST00000394435 LCE1DQ5T752 114 aa3.86□□□□□ -1.79
PRDM5-202ENST00000394435 KRTAP4-2Q9BYR5 136 aa3.84□□□□□ -1.79
PRDM5-202ENST00000394435 KRTAP4-12Q9BQ66 201 aa3.76□□□□□ -1.81
PRDM5-202ENST00000394435 MUC5ACP98088 5654 aa3.64□□□□□ -1.83
PRDM5-202ENST00000394435 LCE1EQ5T753 118 aa3.58□□□□□ -1.84
PRDM5-202ENST00000394435 LCE1BQ5T7P3 118 aa3.57□□□□□ -1.84
PRDM5-202ENST00000394435 KRTAP4-11Q9BYQ6 195 aa3.49□□□□□ -1.85
PRDM5-202ENST00000394435 AHNAK2Q8IVF2 5795 aa3.42□□□□□ -1.86
PRDM5-202ENST00000394435 KRTAP5-10Q6L8G5 202 aa3.42□□□□□ -1.86
PRDM5-202ENST00000394435 KRTAP5-1Q6L8H4 278 aa3.39□□□□□ -1.87
PRDM5-202ENST00000394435 LCE1CQ5T751 118 aa3.38□□□□□ -1.87
PRDM5-202ENST00000394435 KRTAP5-8O75690 187 aa3.19□□□□□ -1.9
PRDM5-202ENST00000394435 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.18□□□□□ -1.9
PRDM5-202ENST00000394435 KRTAP21-2Q3LI59 83 aa3.17□□□□□ -1.9
PRDM5-202ENST00000394435 GPR98Q8WXG9 6306 aa3.16□□□□□ -1.9
PRDM5-202ENST00000394435 KRTAP5-7Q6L8G8 165 aa3.11□□□□□ -1.91
PRDM5-202ENST00000394435 LCE1FQ5T754 118 aa2.95□□□□□ -1.94
PRDM5-202ENST00000394435 KRTAP4-4Q9BYR3 166 aa2.94□□□□□ -1.94
PRDM5-202ENST00000394435 MUC5BQ9HC84 5762 aaPredicted RBP2.93□□□□□ -1.94
PRDM5-202ENST00000394435 KRTAP5-11Q6L8G4 156 aa2.91□□□□□ -1.94
PRDM5-202ENST00000394435 KRTAP21-1Q3LI58 79 aa2.74□□□□□ -1.97
PRDM5-202ENST00000394435 MUC19Q7Z5P9 8384 aa2.64□□□□□ -1.99
PRDM5-202ENST00000394435 AHNAKQ09666 5890 aaKnown RBP2.56□□□□□ -2
PRDM5-202ENST00000394435 PHGR1C9JFL3 82 aa2.52□□□□□ -2.01
PRDM5-202ENST00000394435 MUC16Q8WXI7 14507 aa1.68□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 72.7 ms