RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 MT1EP04732 61 aa3.59□□□□□ -1.83
ACTN1-203ENST00000394419 KRTAP4-3Q9BYR4 195 aa3.56□□□□□ -1.84
ACTN1-203ENST00000394419 SYNE1Q8NF91 8797 aaKnown RBP3.55□□□□□ -1.84
ACTN1-203ENST00000394419 LOC100996750A0A140TA64 210 aa3.54□□□□□ -1.84
ACTN1-203ENST00000394419 MT1GP13640 62 aa3.54□□□□□ -1.84
ACTN1-203ENST00000394419 OBSCNQ5VST9 7968 aa3.5□□□□□ -1.85
ACTN1-203ENST00000394419 KRTAP4-6Q9BYQ5 205 aa3.49□□□□□ -1.85
ACTN1-203ENST00000394419 SPRR2FQ96RM1 72 aa3.46□□□□□ -1.85
ACTN1-203ENST00000394419 KRTAP19-6Q3LI70 58 aa3.45□□□□□ -1.86
ACTN1-203ENST00000394419 KRTAP2-3P0C7H8 128 aa3.44□□□□□ -1.86
ACTN1-203ENST00000394419 KRTAP2-4Q9BYR9 128 aa3.44□□□□□ -1.86
ACTN1-203ENST00000394419 KRTAP2-1Q9BYU5 128 aa3.44□□□□□ -1.86
ACTN1-203ENST00000394419 KRTAP19-4Q3LI73 84 aa3.39□□□□□ -1.87
ACTN1-203ENST00000394419 KRTAP19-3Q7Z4W3 81 aa3.39□□□□□ -1.87
ACTN1-203ENST00000394419 MT1MQ8N339 61 aa3.38□□□□□ -1.87
ACTN1-203ENST00000394419 SYNE2Q8WXH0 6885 aaKnown RBP3.36□□□□□ -1.87
ACTN1-203ENST00000394419 KRTAP9-2Q9BYQ4 174 aa3.35□□□□□ -1.87
ACTN1-203ENST00000394419 MACF1Q9UPN3 7388 aaKnown RBP3.35□□□□□ -1.87
ACTN1-203ENST00000394419 LCE3BQ5TA77 95 aa3.34□□□□□ -1.87
ACTN1-203ENST00000394419 KRTAP12-4P60329 112 aa3.32□□□□□ -1.88
ACTN1-203ENST00000394419 MDN1Q9NU22 5596 aa3.25□□□□□ -1.89
ACTN1-203ENST00000394419 KRTAP4-9Q9BYQ8 210 aa3.25□□□□□ -1.89
ACTN1-203ENST00000394419 MUC5BQ9HC84 5762 aaPredicted RBP3.24□□□□□ -1.89
ACTN1-203ENST00000394419 KRTAP9-7A8MTY7 169 aa3.21□□□□□ -1.9
ACTN1-203ENST00000394419 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.19□□□□□ -1.9
ACTN1-203ENST00000394419 LCE5AQ5TCM9 118 aa3.18□□□□□ -1.9
ACTN1-203ENST00000394419 GPR98Q8WXG9 6306 aa3.15□□□□□ -1.91
ACTN1-203ENST00000394419 SPRR2EP22531 72 aa3.12□□□□□ -1.91
ACTN1-203ENST00000394419 SPRR2BP35325 72 aa3.12□□□□□ -1.91
ACTN1-203ENST00000394419 SPRR2AP35326 72 aa3.12□□□□□ -1.91
ACTN1-203ENST00000394419 KRTAP6-1Q3LI64 71 aa3.11□□□□□ -1.91
ACTN1-203ENST00000394419 LCE3DQ9BYE3 92 aa3.07□□□□□ -1.92
ACTN1-203ENST00000394419 LCE1AQ5T7P2 110 aa3.02□□□□□ -1.93
ACTN1-203ENST00000394419 LCE3EQ5T5B0 92 aa3□□□□□ -1.93
ACTN1-203ENST00000394419 MT1AP04731 61 aa3□□□□□ -1.93
ACTN1-203ENST00000394419 KRTAP9-9Q9BYP9 154 aa2.99□□□□□ -1.93
ACTN1-203ENST00000394419 KRTAP9-4Q9BYQ2 154 aa2.99□□□□□ -1.93
ACTN1-203ENST00000394419 SPRR2DP22532 72 aa2.96□□□□□ -1.93
ACTN1-203ENST00000394419 PRM1P04553 51 aa2.93□□□□□ -1.94
ACTN1-203ENST00000394419 AHNAKQ09666 5890 aaKnown RBP2.92□□□□□ -1.94
ACTN1-203ENST00000394419 KRTAP4-12Q9BQ66 201 aa2.91□□□□□ -1.94
ACTN1-203ENST00000394419 KRTAP20-1Q3LI63 56 aa2.87□□□□□ -1.95
ACTN1-203ENST00000394419 KRTAP5-9P26371 169 aa2.84□□□□□ -1.95
ACTN1-203ENST00000394419 KRTAP5-7Q6L8G8 165 aa2.84□□□□□ -1.95
ACTN1-203ENST00000394419 KRTAP6-2Q3LI66 62 aa2.84□□□□□ -1.96
ACTN1-203ENST00000394419 KRTAP6-3Q3LI67 103 aa2.81□□□□□ -1.96
ACTN1-203ENST00000394419 NEBP20929 6669 aa2.8□□□□□ -1.96
ACTN1-203ENST00000394419 MT3P25713 68 aa2.79□□□□□ -1.96
ACTN1-203ENST00000394419 KRTAP5-5Q701N2 237 aaPredicted RBP2.79□□□□□ -1.96
ACTN1-203ENST00000394419 KRTAP2-2Q9BYT5 123 aa2.78□□□□□ -1.96
ACTN1-203ENST00000394419 LCE1DQ5T752 114 aa2.76□□□□□ -1.97
ACTN1-203ENST00000394419 LCE1EQ5T753 118 aa2.76□□□□□ -1.97
ACTN1-203ENST00000394419 KRTAP4-2Q9BYR5 136 aa2.75□□□□□ -1.97
ACTN1-203ENST00000394419 LCE1FQ5T754 118 aa2.73□□□□□ -1.97
ACTN1-203ENST00000394419 MT4P47944 62 aa2.73□□□□□ -1.97
ACTN1-203ENST00000394419 KRTAP5-3Q6L8H2 238 aa2.68□□□□□ -1.98
ACTN1-203ENST00000394419 LCE4AQ5TA78 99 aa2.65□□□□□ -1.98
ACTN1-203ENST00000394419 KRTAP4-11Q9BYQ6 195 aa2.59□□□□□ -1.99
ACTN1-203ENST00000394419 MUC19Q7Z5P9 8384 aa2.55□□□□□ -2
ACTN1-203ENST00000394419 LCE1BQ5T7P3 118 aa2.47□□□□□ -2.01
ACTN1-203ENST00000394419 HMCN1Q96RW7 5635 aa2.46□□□□□ -2.02
ACTN1-203ENST00000394419 KRTAP5-10Q6L8G5 202 aa2.45□□□□□ -2.02
ACTN1-203ENST00000394419 KRTAP20-2Q3LI61 65 aa2.44□□□□□ -2.02
ACTN1-203ENST00000394419 KRTAP5-4Q6L8H1 288 aa2.42□□□□□ -2.02
ACTN1-203ENST00000394419 AHNAK2Q8IVF2 5795 aa2.35□□□□□ -2.03
ACTN1-203ENST00000394419 MUC5ACP98088 5654 aa2.35□□□□□ -2.03
ACTN1-203ENST00000394419 KRTAP5-2Q701N4 177 aa2.25□□□□□ -2.05
ACTN1-203ENST00000394419 KRTAP4-4Q9BYR3 166 aa2.04□□□□□ -2.08
ACTN1-203ENST00000394419 LCE1CQ5T751 118 aa2□□□□□ -2.09
ACTN1-203ENST00000394419 KRTAP5-1Q6L8H4 278 aa1.98□□□□□ -2.09
ACTN1-203ENST00000394419 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.92□□□□□ -2.1
ACTN1-203ENST00000394419 KRTAP21-2Q3LI59 83 aa1.9□□□□□ -2.11
ACTN1-203ENST00000394419 KRTAP5-8O75690 187 aa1.86□□□□□ -2.11
ACTN1-203ENST00000394419 KRTAP5-11Q6L8G4 156 aa1.81□□□□□ -2.12
ACTN1-203ENST00000394419 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
ACTN1-203ENST00000394419 PHGR1C9JFL3 82 aa1.48□□□□□ -2.17
ACTN1-203ENST00000394419 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 76.9 ms