RNA–Protein interactions for RNA: ENST00000394156.7

CDH11-202, Transcript of cadherin 11, humanhuman

TSL 1 (best) BASIC

Gene CDH11, Length 6,874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-202ENST00000394156 MT4P47944 62 aa3.05□□□□□ -1.92
CDH11-202ENST00000394156 KMT2DO14686 5537 aa3.04□□□□□ -1.92
CDH11-202ENST00000394156 KRTAP12-4P60329 112 aa3.01□□□□□ -1.93
CDH11-202ENST00000394156 MT1LQ93083 61 aa2.98□□□□□ -1.93
CDH11-202ENST00000394156 MT1EP04732 61 aa2.97□□□□□ -1.93
CDH11-202ENST00000394156 KRTAP19-3Q7Z4W3 81 aa2.96□□□□□ -1.94
CDH11-202ENST00000394156 KRTAP4-9Q9BYQ8 210 aa2.94□□□□□ -1.94
CDH11-202ENST00000394156 LCE2DQ5TA82 110 aaPredicted RBP2.91□□□□□ -1.94
CDH11-202ENST00000394156 LCE2AQ5TA79 106 aaPredicted RBP2.89□□□□□ -1.95
CDH11-202ENST00000394156 MT1MQ8N339 61 aa2.88□□□□□ -1.95
CDH11-202ENST00000394156 LCE3DQ9BYE3 92 aa2.86□□□□□ -1.95
CDH11-202ENST00000394156 KRTAP19-6Q3LI70 58 aa2.84□□□□□ -1.95
CDH11-202ENST00000394156 USH2AO75445 5202 aa2.82□□□□□ -1.96
CDH11-202ENST00000394156 KRTAP9-6A0A140TA67 174 aa2.79□□□□□ -1.96
CDH11-202ENST00000394156 KRTAP19-7Q3SYF9 63 aa2.79□□□□□ -1.96
CDH11-202ENST00000394156 LCE1BQ5T7P3 118 aa2.77□□□□□ -1.97
CDH11-202ENST00000394156 OBSCNQ5VST9 7968 aa2.76□□□□□ -1.97
CDH11-202ENST00000394156 SYNE1Q8NF91 8797 aaKnown RBP2.76□□□□□ -1.97
CDH11-202ENST00000394156 LCE1DQ5T752 114 aa2.75□□□□□ -1.97
CDH11-202ENST00000394156 LCE3EQ5T5B0 92 aa2.74□□□□□ -1.97
CDH11-202ENST00000394156 DSTQ03001 7570 aaKnown RBP2.73□□□□□ -1.97
CDH11-202ENST00000394156 KRTAP9-6A8MVA2 160 aa2.73□□□□□ -1.97
CDH11-202ENST00000394156 PRM1P04553 51 aa2.73□□□□□ -1.97
CDH11-202ENST00000394156 FCGBPQ9Y6R7 5405 aaPredicted RBP2.72□□□□□ -1.97
CDH11-202ENST00000394156 MT3P25713 68 aa2.7□□□□□ -1.98
CDH11-202ENST00000394156 KRTAP9-7A8MTY7 169 aa2.66□□□□□ -1.98
CDH11-202ENST00000394156 KRTAP6-1Q3LI64 71 aa2.64□□□□□ -1.99
CDH11-202ENST00000394156 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.61□□□□□ -1.99
CDH11-202ENST00000394156 KRTAP2-3P0C7H8 128 aa2.61□□□□□ -1.99
CDH11-202ENST00000394156 KRTAP2-4Q9BYR9 128 aa2.61□□□□□ -1.99
CDH11-202ENST00000394156 KRTAP2-1Q9BYU5 128 aa2.61□□□□□ -1.99
CDH11-202ENST00000394156 MACF1Q9UPN3 7388 aaKnown RBP2.6□□□□□ -1.99
CDH11-202ENST00000394156 KRTAP6-2Q3LI66 62 aa2.59□□□□□ -1.99
CDH11-202ENST00000394156 KRTAP20-1Q3LI63 56 aa2.57□□□□□ -2
CDH11-202ENST00000394156 LCE1AQ5T7P2 110 aa2.55□□□□□ -2
CDH11-202ENST00000394156 LCE5AQ5TCM9 118 aa2.55□□□□□ -2
CDH11-202ENST00000394156 MUC12Q9UKN1 5478 aa2.53□□□□□ -2
CDH11-202ENST00000394156 LCE4AQ5TA78 99 aa2.53□□□□□ -2
CDH11-202ENST00000394156 MT1AP04731 61 aa2.5□□□□□ -2.01
CDH11-202ENST00000394156 LCE1CQ5T751 118 aa2.49□□□□□ -2.01
CDH11-202ENST00000394156 LCE1EQ5T753 118 aa2.49□□□□□ -2.01
CDH11-202ENST00000394156 LCE1FQ5T754 118 aa2.49□□□□□ -2.01
CDH11-202ENST00000394156 KRTAP6-3Q3LI67 103 aa2.44□□□□□ -2.02
CDH11-202ENST00000394156 SSPOA2VEC9 5147 aa2.43□□□□□ -2.02
CDH11-202ENST00000394156 KRTAP9-4Q9BYQ2 154 aa2.42□□□□□ -2.02
CDH11-202ENST00000394156 KRTAP4-6Q9BYQ5 205 aa2.36□□□□□ -2.03
CDH11-202ENST00000394156 KRTAP2-2Q9BYT5 123 aa2.32□□□□□ -2.04
CDH11-202ENST00000394156 KRTAP4-4Q9BYR3 166 aa2.16□□□□□ -2.06
CDH11-202ENST00000394156 MDN1Q9NU22 5596 aa2.15□□□□□ -2.07
CDH11-202ENST00000394156 KRTAP4-11Q9BYQ6 195 aa2.14□□□□□ -2.07
CDH11-202ENST00000394156 KRTAP4-12Q9BQ66 201 aa2.13□□□□□ -2.07
CDH11-202ENST00000394156 KRTAP4-2Q9BYR5 136 aa2.13□□□□□ -2.07
CDH11-202ENST00000394156 KRTAP5-9P26371 169 aa2.13□□□□□ -2.07
CDH11-202ENST00000394156 NEBP20929 6669 aa2.12□□□□□ -2.07
CDH11-202ENST00000394156 KRTAP20-2Q3LI61 65 aa2.09□□□□□ -2.07
CDH11-202ENST00000394156 KRTAP9-9Q9BYP9 154 aa2.05□□□□□ -2.08
CDH11-202ENST00000394156 KRTAP5-5Q701N2 237 aaPredicted RBP2.03□□□□□ -2.09
CDH11-202ENST00000394156 MUC19Q7Z5P9 8384 aa1.98□□□□□ -2.09
CDH11-202ENST00000394156 KRTAP5-4Q6L8H1 288 aa1.85□□□□□ -2.11
CDH11-202ENST00000394156 MUC5ACP98088 5654 aa1.8□□□□□ -2.12
CDH11-202ENST00000394156 GPR98Q8WXG9 6306 aa1.71□□□□□ -2.14
CDH11-202ENST00000394156 KRTAP5-3Q6L8H2 238 aa1.7□□□□□ -2.14
CDH11-202ENST00000394156 KRTAP5-8O75690 187 aa1.66□□□□□ -2.14
CDH11-202ENST00000394156 HMCN1Q96RW7 5635 aa1.65□□□□□ -2.14
CDH11-202ENST00000394156 AHNAK2Q8IVF2 5795 aa1.58□□□□□ -2.16
CDH11-202ENST00000394156 KRTAP5-10Q6L8G5 202 aa1.54□□□□□ -2.16
CDH11-202ENST00000394156 AHNAKQ09666 5890 aaKnown RBP1.51□□□□□ -2.17
CDH11-202ENST00000394156 KRTAP5-2Q701N4 177 aa1.49□□□□□ -2.17
CDH11-202ENST00000394156 MUC5BQ9HC84 5762 aaPredicted RBP1.46□□□□□ -2.18
CDH11-202ENST00000394156 PHGR1C9JFL3 82 aa1.43□□□□□ -2.18
CDH11-202ENST00000394156 KRTAP5-1Q6L8H4 278 aa1.41□□□□□ -2.18
CDH11-202ENST00000394156 KRTAP21-2Q3LI59 83 aa1.34□□□□□ -2.19
CDH11-202ENST00000394156 KRTAP5-11Q6L8G4 156 aa1.24□□□□□ -2.21
CDH11-202ENST00000394156 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.24□□□□□ -2.21
CDH11-202ENST00000394156 KRTAP5-7Q6L8G8 165 aa1.2□□□□□ -2.22
CDH11-202ENST00000394156 KRTAP21-1Q3LI58 79 aa1.19□□□□□ -2.22
CDH11-202ENST00000394156 MUC16Q8WXI7 14507 aa0.99□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 6.8 ms