RNA–Protein interactions for RNA: ENST00000394023.7

SMARCC2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 4,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-203ENST00000394023 KRTAP4-3Q9BYR4 195 aa6.32□□□□□ -1.4
SMARCC2-203ENST00000394023 MUC12Q9UKN1 5478 aa6.29□□□□□ -1.4
SMARCC2-203ENST00000394023 FCGBPQ9Y6R7 5405 aaPredicted RBP6.28□□□□□ -1.4
SMARCC2-203ENST00000394023 LOC100996750A0A140TA64 210 aa6.25□□□□□ -1.41
SMARCC2-203ENST00000394023 KRTAP19-4Q3LI73 84 aa6.24□□□□□ -1.41
SMARCC2-203ENST00000394023 SYNE1Q8NF91 8797 aaKnown RBP6.2□□□□□ -1.42
SMARCC2-203ENST00000394023 KRTAP19-3Q7Z4W3 81 aa6.19□□□□□ -1.42
SMARCC2-203ENST00000394023 MT1MQ8N339 61 aa6.11□□□□□ -1.43
SMARCC2-203ENST00000394023 OBSCNQ5VST9 7968 aa6.03□□□□□ -1.44
SMARCC2-203ENST00000394023 LCE2DQ5TA82 110 aaPredicted RBP6.01□□□□□ -1.45
SMARCC2-203ENST00000394023 LCE3BQ5TA77 95 aa6.01□□□□□ -1.45
SMARCC2-203ENST00000394023 MACF1Q9UPN3 7388 aaKnown RBP6□□□□□ -1.45
SMARCC2-203ENST00000394023 SYNE2Q8WXH0 6885 aaKnown RBP5.98□□□□□ -1.45
SMARCC2-203ENST00000394023 KRTAP2-3P0C7H8 128 aa5.94□□□□□ -1.46
SMARCC2-203ENST00000394023 KRTAP2-4Q9BYR9 128 aa5.94□□□□□ -1.46
SMARCC2-203ENST00000394023 KRTAP2-1Q9BYU5 128 aa5.94□□□□□ -1.46
SMARCC2-203ENST00000394023 KRTAP9-2Q9BYQ4 174 aa5.93□□□□□ -1.46
SMARCC2-203ENST00000394023 SPRR2EP22531 72 aa5.92□□□□□ -1.46
SMARCC2-203ENST00000394023 SPRR2BP35325 72 aa5.92□□□□□ -1.46
SMARCC2-203ENST00000394023 SPRR2AP35326 72 aa5.92□□□□□ -1.46
SMARCC2-203ENST00000394023 KRTAP12-4P60329 112 aa5.84□□□□□ -1.48
SMARCC2-203ENST00000394023 LCE5AQ5TCM9 118 aa5.75□□□□□ -1.49
SMARCC2-203ENST00000394023 KRTAP4-9Q9BYQ8 210 aa5.67□□□□□ -1.5
SMARCC2-203ENST00000394023 SPRR2DP22532 72 aa5.66□□□□□ -1.5
SMARCC2-203ENST00000394023 MDN1Q9NU22 5596 aa5.66□□□□□ -1.5
SMARCC2-203ENST00000394023 LCE1AQ5T7P2 110 aa5.55□□□□□ -1.52
SMARCC2-203ENST00000394023 KRTAP6-1Q3LI64 71 aa5.53□□□□□ -1.52
SMARCC2-203ENST00000394023 LCE3DQ9BYE3 92 aa5.52□□□□□ -1.53
SMARCC2-203ENST00000394023 MT1AP04731 61 aa5.45□□□□□ -1.54
SMARCC2-203ENST00000394023 LCE3EQ5T5B0 92 aa5.4□□□□□ -1.55
SMARCC2-203ENST00000394023 KRTAP5-9P26371 169 aa5.26□□□□□ -1.57
SMARCC2-203ENST00000394023 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.25□□□□□ -1.57
SMARCC2-203ENST00000394023 KRTAP9-6A0A140TA67 174 aa5.22□□□□□ -1.57
SMARCC2-203ENST00000394023 KRTAP6-3Q3LI67 103 aa5.17□□□□□ -1.58
SMARCC2-203ENST00000394023 MT3P25713 68 aa5.15□□□□□ -1.58
SMARCC2-203ENST00000394023 MT4P47944 62 aa5.15□□□□□ -1.59
SMARCC2-203ENST00000394023 KRTAP6-2Q3LI66 62 aa5.12□□□□□ -1.59
SMARCC2-203ENST00000394023 PRM1P04553 51 aa5.11□□□□□ -1.59
SMARCC2-203ENST00000394023 KRTAP9-4Q9BYQ2 154 aa5.11□□□□□ -1.59
SMARCC2-203ENST00000394023 KRTAP9-7A8MTY7 169 aa5.03□□□□□ -1.6
SMARCC2-203ENST00000394023 KRTAP5-5Q701N2 237 aaPredicted RBP4.92□□□□□ -1.62
SMARCC2-203ENST00000394023 NEBP20929 6669 aa4.77□□□□□ -1.65
SMARCC2-203ENST00000394023 KRTAP4-6Q9BYQ5 205 aa4.75□□□□□ -1.65
SMARCC2-203ENST00000394023 LCE1DQ5T752 114 aa4.69□□□□□ -1.66
SMARCC2-203ENST00000394023 LCE1BQ5T7P3 118 aa4.6□□□□□ -1.67
SMARCC2-203ENST00000394023 LCE4AQ5TA78 99 aa4.58□□□□□ -1.68
SMARCC2-203ENST00000394023 KRTAP2-2Q9BYT5 123 aa4.54□□□□□ -1.68
SMARCC2-203ENST00000394023 KRTAP20-2Q3LI61 65 aa4.5□□□□□ -1.69
SMARCC2-203ENST00000394023 KRTAP20-1Q3LI63 56 aa4.48□□□□□ -1.69
SMARCC2-203ENST00000394023 KRTAP5-4Q6L8H1 288 aa4.4□□□□□ -1.71
SMARCC2-203ENST00000394023 HMCN1Q96RW7 5635 aa4.37□□□□□ -1.71
SMARCC2-203ENST00000394023 MUC5ACP98088 5654 aa4.16□□□□□ -1.74
SMARCC2-203ENST00000394023 KRTAP5-2Q701N4 177 aa4.03□□□□□ -1.76
SMARCC2-203ENST00000394023 KRTAP5-3Q6L8H2 238 aa3.98□□□□□ -1.77
SMARCC2-203ENST00000394023 MUC19Q7Z5P9 8384 aa3.94□□□□□ -1.78
SMARCC2-203ENST00000394023 KRTAP4-11Q9BYQ6 195 aa3.92□□□□□ -1.78
SMARCC2-203ENST00000394023 LCE1EQ5T753 118 aa3.85□□□□□ -1.79
SMARCC2-203ENST00000394023 AHNAK2Q8IVF2 5795 aa3.68□□□□□ -1.82
SMARCC2-203ENST00000394023 KRTAP4-4Q9BYR3 166 aa3.67□□□□□ -1.82
SMARCC2-203ENST00000394023 KRTAP5-10Q6L8G5 202 aa3.63□□□□□ -1.83
SMARCC2-203ENST00000394023 KRTAP4-2Q9BYR5 136 aa3.63□□□□□ -1.83
SMARCC2-203ENST00000394023 LCE1CQ5T751 118 aa3.61□□□□□ -1.83
SMARCC2-203ENST00000394023 GPR98Q8WXG9 6306 aa3.57□□□□□ -1.84
SMARCC2-203ENST00000394023 KRTAP4-12Q9BQ66 201 aa3.56□□□□□ -1.84
SMARCC2-203ENST00000394023 KRTAP5-1Q6L8H4 278 aa3.56□□□□□ -1.84
SMARCC2-203ENST00000394023 KRTAP9-9Q9BYP9 154 aa3.45□□□□□ -1.86
SMARCC2-203ENST00000394023 MUC5BQ9HC84 5762 aaPredicted RBP3.45□□□□□ -1.86
SMARCC2-203ENST00000394023 KRTAP5-8O75690 187 aa3.44□□□□□ -1.86
SMARCC2-203ENST00000394023 LCE1FQ5T754 118 aa3.4□□□□□ -1.87
SMARCC2-203ENST00000394023 KRTAP21-2Q3LI59 83 aa3.33□□□□□ -1.88
SMARCC2-203ENST00000394023 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.15□□□□□ -1.91
SMARCC2-203ENST00000394023 KRTAP5-11Q6L8G4 156 aa3.09□□□□□ -1.91
SMARCC2-203ENST00000394023 KRTAP5-7Q6L8G8 165 aa3.02□□□□□ -1.93
SMARCC2-203ENST00000394023 AHNAKQ09666 5890 aaKnown RBP2.9□□□□□ -1.94
SMARCC2-203ENST00000394023 KRTAP21-1Q3LI58 79 aa2.74□□□□□ -1.97
SMARCC2-203ENST00000394023 PHGR1C9JFL3 82 aa2.68□□□□□ -1.98
SMARCC2-203ENST00000394023 MUC16Q8WXI7 14507 aa1.72□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 77.9 ms