RNA–Protein interactions for RNA: ENST00000393606.7

UBTF-203, Transcript of upstream binding transcription factor, humanhuman

TSL 1 (best) BASIC

Gene UBTF, Length 2,683 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBTF-203ENST00000393606 KRTAP19-6Q3LI70 58 aa6.6□□□□□ -1.35
UBTF-203ENST00000393606 KRTAP4-3Q9BYR4 195 aa6.56□□□□□ -1.36
UBTF-203ENST00000393606 LOC100996750A0A140TA64 210 aa6.51□□□□□ -1.37
UBTF-203ENST00000393606 DSTQ03001 7570 aaKnown RBP6.49□□□□□ -1.37
UBTF-203ENST00000393606 LCE2DQ5TA82 110 aaPredicted RBP6.44□□□□□ -1.38
UBTF-203ENST00000393606 CRCT1Q9UGL9 99 aa6.43□□□□□ -1.38
UBTF-203ENST00000393606 MT1GP13640 62 aa6.41□□□□□ -1.38
UBTF-203ENST00000393606 KRTAP19-4Q3LI73 84 aa6.36□□□□□ -1.39
UBTF-203ENST00000393606 MACF1Q9UPN3 7388 aaKnown RBP6.3□□□□□ -1.4
UBTF-203ENST00000393606 MT1MQ8N339 61 aa6.29□□□□□ -1.4
UBTF-203ENST00000393606 KRTAP19-3Q7Z4W3 81 aa6.28□□□□□ -1.4
UBTF-203ENST00000393606 SPRR2FQ96RM1 72 aa6.23□□□□□ -1.41
UBTF-203ENST00000393606 SYNE2Q8WXH0 6885 aaKnown RBP6.19□□□□□ -1.42
UBTF-203ENST00000393606 KRTAP12-4P60329 112 aa6.07□□□□□ -1.44
UBTF-203ENST00000393606 LCE5AQ5TCM9 118 aa6.05□□□□□ -1.44
UBTF-203ENST00000393606 MDN1Q9NU22 5596 aa6.04□□□□□ -1.44
UBTF-203ENST00000393606 SYNE1Q8NF91 8797 aaKnown RBP5.99□□□□□ -1.45
UBTF-203ENST00000393606 KRTAP9-2Q9BYQ4 174 aa5.97□□□□□ -1.45
UBTF-203ENST00000393606 LCE3BQ5TA77 95 aa5.92□□□□□ -1.46
UBTF-203ENST00000393606 KRTAP4-9Q9BYQ8 210 aa5.85□□□□□ -1.47
UBTF-203ENST00000393606 KRTAP6-1Q3LI64 71 aa5.76□□□□□ -1.49
UBTF-203ENST00000393606 LCE1AQ5T7P2 110 aa5.72□□□□□ -1.49
UBTF-203ENST00000393606 SPRR2EP22531 72 aa5.66□□□□□ -1.5
UBTF-203ENST00000393606 SPRR2BP35325 72 aa5.66□□□□□ -1.5
UBTF-203ENST00000393606 SPRR2AP35326 72 aa5.66□□□□□ -1.5
UBTF-203ENST00000393606 OBSCNQ5VST9 7968 aa5.61□□□□□ -1.51
UBTF-203ENST00000393606 KRTAP5-9P26371 169 aa5.58□□□□□ -1.52
UBTF-203ENST00000393606 KRTAP9-7A8MTY7 169 aa5.57□□□□□ -1.52
UBTF-203ENST00000393606 MT1AP04731 61 aa5.57□□□□□ -1.52
UBTF-203ENST00000393606 PRM1P04553 51 aa5.49□□□□□ -1.53
UBTF-203ENST00000393606 KRTAP5-5Q701N2 237 aaPredicted RBP5.47□□□□□ -1.53
UBTF-203ENST00000393606 LCE3DQ9BYE3 92 aa5.47□□□□□ -1.53
UBTF-203ENST00000393606 KRTAP9-6A0A140TA67 174 aa5.41□□□□□ -1.54
UBTF-203ENST00000393606 SPRR2DP22532 72 aa5.4□□□□□ -1.54
UBTF-203ENST00000393606 LCE3EQ5T5B0 92 aa5.4□□□□□ -1.54
UBTF-203ENST00000393606 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.29□□□□□ -1.56
UBTF-203ENST00000393606 KRTAP9-4Q9BYQ2 154 aa5.28□□□□□ -1.56
UBTF-203ENST00000393606 KRTAP6-3Q3LI67 103 aa5.23□□□□□ -1.57
UBTF-203ENST00000393606 KRTAP6-2Q3LI66 62 aa5.2□□□□□ -1.58
UBTF-203ENST00000393606 MT3P25713 68 aa5.03□□□□□ -1.6
UBTF-203ENST00000393606 NEBP20929 6669 aa4.95□□□□□ -1.62
UBTF-203ENST00000393606 KRTAP2-2Q9BYT5 123 aa4.93□□□□□ -1.62
UBTF-203ENST00000393606 MT4P47944 62 aa4.89□□□□□ -1.63
UBTF-203ENST00000393606 KRTAP4-6Q9BYQ5 205 aa4.87□□□□□ -1.63
UBTF-203ENST00000393606 KRTAP5-4Q6L8H1 288 aa4.79□□□□□ -1.64
UBTF-203ENST00000393606 LCE1EQ5T753 118 aa4.76□□□□□ -1.65
UBTF-203ENST00000393606 HMCN1Q96RW7 5635 aa4.63□□□□□ -1.67
UBTF-203ENST00000393606 KRTAP20-2Q3LI61 65 aa4.62□□□□□ -1.67
UBTF-203ENST00000393606 LCE1DQ5T752 114 aa4.56□□□□□ -1.68
UBTF-203ENST00000393606 LCE4AQ5TA78 99 aa4.5□□□□□ -1.69
UBTF-203ENST00000393606 KRTAP5-2Q701N4 177 aa4.46□□□□□ -1.7
UBTF-203ENST00000393606 KRTAP20-1Q3LI63 56 aa4.34□□□□□ -1.71
UBTF-203ENST00000393606 KRTAP5-3Q6L8H2 238 aa4.34□□□□□ -1.71
UBTF-203ENST00000393606 MUC5ACP98088 5654 aa4.34□□□□□ -1.71
UBTF-203ENST00000393606 LCE1BQ5T7P3 118 aa4.27□□□□□ -1.73
UBTF-203ENST00000393606 KRTAP4-11Q9BYQ6 195 aa4.17□□□□□ -1.74
UBTF-203ENST00000393606 KRTAP5-10Q6L8G5 202 aa3.98□□□□□ -1.77
UBTF-203ENST00000393606 KRTAP4-2Q9BYR5 136 aa3.92□□□□□ -1.78
UBTF-203ENST00000393606 KRTAP5-1Q6L8H4 278 aa3.88□□□□□ -1.79
UBTF-203ENST00000393606 LCE1FQ5T754 118 aa3.88□□□□□ -1.79
UBTF-203ENST00000393606 LCE1CQ5T751 118 aa3.83□□□□□ -1.8
UBTF-203ENST00000393606 AHNAK2Q8IVF2 5795 aa3.75□□□□□ -1.81
UBTF-203ENST00000393606 MUC19Q7Z5P9 8384 aa3.75□□□□□ -1.81
UBTF-203ENST00000393606 KRTAP21-2Q3LI59 83 aa3.66□□□□□ -1.82
UBTF-203ENST00000393606 KRTAP5-8O75690 187 aa3.65□□□□□ -1.82
UBTF-203ENST00000393606 GPR98Q8WXG9 6306 aa3.61□□□□□ -1.83
UBTF-203ENST00000393606 KRTAP4-4Q9BYR3 166 aa3.58□□□□□ -1.84
UBTF-203ENST00000393606 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.53□□□□□ -1.84
UBTF-203ENST00000393606 MUC5BQ9HC84 5762 aaPredicted RBP3.52□□□□□ -1.85
UBTF-203ENST00000393606 KRTAP5-7Q6L8G8 165 aa3.42□□□□□ -1.86
UBTF-203ENST00000393606 KRTAP4-12Q9BQ66 201 aa3.41□□□□□ -1.86
UBTF-203ENST00000393606 KRTAP21-1Q3LI58 79 aa3.39□□□□□ -1.87
UBTF-203ENST00000393606 KRTAP5-11Q6L8G4 156 aa3.27□□□□□ -1.89
UBTF-203ENST00000393606 KRTAP9-9Q9BYP9 154 aa3.25□□□□□ -1.89
UBTF-203ENST00000393606 PHGR1C9JFL3 82 aa2.87□□□□□ -1.95
UBTF-203ENST00000393606 AHNAKQ09666 5890 aaKnown RBP2.8□□□□□ -1.96
UBTF-203ENST00000393606 MUC16Q8WXI7 14507 aa1.9□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 12.8 ms