RNA–Protein interactions for RNA: ENST00000392632.6

UBR3-202, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-202ENST00000392632 SSPOA2VEC9 5147 aa1.43□□□□□ -2.18
UBR3-202ENST00000392632 PLECQ15149 4684 aaKnown RBP1.43□□□□□ -2.18
UBR3-202ENST00000392632 FAT1Q14517 4588 aa1.42□□□□□ -2.18
UBR3-202ENST00000392632 APOBP04114 4563 aaKnown RBP1.42□□□□□ -2.18
UBR3-202ENST00000392632 FAT4Q6V0I7 4981 aa1.41□□□□□ -2.18
UBR3-202ENST00000392632 SYNE1Q8NF91 8797 aaKnown RBP1.41□□□□□ -2.18
UBR3-202ENST00000392632 LRP1Q07954 4544 aaKnown RBP1.4□□□□□ -2.19
UBR3-202ENST00000392632 LCE3DQ9BYE3 92 aa1.39□□□□□ -2.19
UBR3-202ENST00000392632 LCE3EQ5T5B0 92 aa1.38□□□□□ -2.19
UBR3-202ENST00000392632 ABCA13Q86UQ4 5058 aa1.37□□□□□ -2.19
UBR3-202ENST00000392632 KRTAP5-9P26371 169 aa1.36□□□□□ -2.19
UBR3-202ENST00000392632 MT3P25713 68 aa1.36□□□□□ -2.19
UBR3-202ENST00000392632 DYNC1H1Q14204 4646 aaKnown RBP1.36□□□□□ -2.19
UBR3-202ENST00000392632 KRTAP19-3Q7Z4W3 81 aa1.34□□□□□ -2.19
UBR3-202ENST00000392632 MT1XP80297 61 aa1.33□□□□□ -2.2
UBR3-202ENST00000392632 MT1LQ93083 61 aa1.32□□□□□ -2.2
UBR3-202ENST00000392632 LRP1BQ9NZR2 4599 aa1.32□□□□□ -2.2
UBR3-202ENST00000392632 STARD9Q9P2P6 4700 aa1.32□□□□□ -2.2
UBR3-202ENST00000392632 MT1BP07438 61 aa1.32□□□□□ -2.2
UBR3-202ENST00000392632 HERC1Q15751 4861 aa1.31□□□□□ -2.2
UBR3-202ENST00000392632 MUC5BQ9HC84 5762 aaPredicted RBP1.31□□□□□ -2.2
UBR3-202ENST00000392632 MUC17Q685J3 4493 aa1.31□□□□□ -2.2
UBR3-202ENST00000392632 KRTAP5-4Q6L8H1 288 aa1.3□□□□□ -2.2
UBR3-202ENST00000392632 MT4P47944 62 aa1.28□□□□□ -2.2
UBR3-202ENST00000392632 KRTAP20-1Q3LI63 56 aa1.28□□□□□ -2.21
UBR3-202ENST00000392632 LRP2P98164 4655 aa1.28□□□□□ -2.21
UBR3-202ENST00000392632 MACF1Q9UPN3 7388 aaKnown RBP1.27□□□□□ -2.21
UBR3-202ENST00000392632 LCE1BQ5T7P3 118 aa1.27□□□□□ -2.21
UBR3-202ENST00000392632 KRTAP19-6Q3LI70 58 aa1.25□□□□□ -2.21
UBR3-202ENST00000392632 MT1EP04732 61 aa1.25□□□□□ -2.21
UBR3-202ENST00000392632 MT1MQ8N339 61 aa1.23□□□□□ -2.21
UBR3-202ENST00000392632 HMCN2Q8NDA2 5059 aa1.23□□□□□ -2.21
UBR3-202ENST00000392632 KRTAP2-3P0C7H8 128 aa1.23□□□□□ -2.21
UBR3-202ENST00000392632 LCE1AQ5T7P2 110 aa1.23□□□□□ -2.21
UBR3-202ENST00000392632 KRTAP2-4Q9BYR9 128 aa1.23□□□□□ -2.21
UBR3-202ENST00000392632 MT1AP04731 61 aa1.2□□□□□ -2.22
UBR3-202ENST00000392632 KRTAP6-3Q3LI67 103 aa1.2□□□□□ -2.22
UBR3-202ENST00000392632 KRTAP5-5Q701N2 237 aaPredicted RBP1.18□□□□□ -2.22
UBR3-202ENST00000392632 KRTAP2-2Q9BYT5 123 aa1.18□□□□□ -2.22
UBR3-202ENST00000392632 KRTAP2-1Q9BYU5 128 aa1.18□□□□□ -2.22
UBR3-202ENST00000392632 PRM1P04553 51 aa1.17□□□□□ -2.22
UBR3-202ENST00000392632 OBSCNQ5VST9 7968 aa1.17□□□□□ -2.22
UBR3-202ENST00000392632 KRTAP19-2Q3LHN2 52 aa1.16□□□□□ -2.22
UBR3-202ENST00000392632 LCE1CQ5T751 118 aa1.16□□□□□ -2.22
UBR3-202ENST00000392632 LCE1EQ5T753 118 aa1.16□□□□□ -2.22
UBR3-202ENST00000392632 LCE1FQ5T754 118 aa1.16□□□□□ -2.22
UBR3-202ENST00000392632 KRTAP5-7Q6L8G8 165 aa1.15□□□□□ -2.22
UBR3-202ENST00000392632 AHNAKQ09666 5890 aaKnown RBP1.15□□□□□ -2.22
UBR3-202ENST00000392632 HMCN1Q96RW7 5635 aa1.15□□□□□ -2.23
UBR3-202ENST00000392632 LPAP08519 4548 aa1.15□□□□□ -2.23
UBR3-202ENST00000392632 KRTAP4-4Q9BYR3 166 aa1.12□□□□□ -2.23
UBR3-202ENST00000392632 SYNE2Q8WXH0 6885 aaKnown RBP1.11□□□□□ -2.23
UBR3-202ENST00000392632 KRTAP5-11Q6L8G4 156 aa1.1□□□□□ -2.23
UBR3-202ENST00000392632 RNF213Q63HN8 5207 aa1.1□□□□□ -2.23
UBR3-202ENST00000392632 DSTQ03001 7570 aaKnown RBP1.09□□□□□ -2.24
UBR3-202ENST00000392632 AHNAK2Q8IVF2 5795 aa1.08□□□□□ -2.24
UBR3-202ENST00000392632 FSIP2Q5CZC0 6907 aa1.07□□□□□ -2.24
UBR3-202ENST00000392632 KRTAP19-7Q3SYF9 63 aa1.07□□□□□ -2.24
UBR3-202ENST00000392632 NEBP20929 6669 aa1.06□□□□□ -2.24
UBR3-202ENST00000392632 KRTAP4-3Q9BYR4 195 aa1.06□□□□□ -2.24
UBR3-202ENST00000392632 MUC19Q7Z5P9 8384 aa1.06□□□□□ -2.24
UBR3-202ENST00000392632 KRTAP5-10Q6L8G5 202 aa1.05□□□□□ -2.24
UBR3-202ENST00000392632 KRTAP6-2Q3LI66 62 aa1.05□□□□□ -2.24
UBR3-202ENST00000392632 KRTAP5-8O75690 187 aa1.05□□□□□ -2.24
UBR3-202ENST00000392632 KRTAP6-1Q3LI64 71 aa1.01□□□□□ -2.25
UBR3-202ENST00000392632 MUC12Q9UKN1 5478 aa1□□□□□ -2.25
UBR3-202ENST00000392632 KRTAP9-6A8MVA2 160 aa0.98□□□□□ -2.25
UBR3-202ENST00000392632 KMT2DO14686 5537 aa0.97□□□□□ -2.25
UBR3-202ENST00000392632 MUC5ACP98088 5654 aa0.96□□□□□ -2.26
UBR3-202ENST00000392632 USH2AO75445 5202 aa0.96□□□□□ -2.26
UBR3-202ENST00000392632 KRTAP5-1Q6L8H4 278 aa0.94□□□□□ -2.26
UBR3-202ENST00000392632 MDN1Q9NU22 5596 aa0.91□□□□□ -2.26
UBR3-202ENST00000392632 FCGBPQ9Y6R7 5405 aaPredicted RBP0.9□□□□□ -2.27
UBR3-202ENST00000392632 KRTAP20-2Q3LI61 65 aa0.88□□□□□ -2.27
UBR3-202ENST00000392632 PHGR1C9JFL3 82 aa0.7□□□□□ -2.3
UBR3-202ENST00000392632 KRTAP21-1Q3LI58 79 aa0.68□□□□□ -2.3
UBR3-202ENST00000392632 MUC16Q8WXI7 14507 aa0.59□□□□□ -2.32
UBR3-202ENST00000392632 KRTAP21-2Q3LI59 83 aa0.51□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 86.9 ms