RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 MT1LQ93083 61 aa5.59□□□□□ -1.51
SNX9-201ENST00000392185 OBSCNQ5VST9 7968 aa5.59□□□□□ -1.51
SNX9-201ENST00000392185 KRTAP19-3Q7Z4W3 81 aa5.56□□□□□ -1.52
SNX9-201ENST00000392185 SPRR2DP22532 72 aa5.53□□□□□ -1.52
SNX9-201ENST00000392185 LCE3BQ5TA77 95 aa5.51□□□□□ -1.53
SNX9-201ENST00000392185 KRTAP19-7Q3SYF9 63 aa5.46□□□□□ -1.53
SNX9-201ENST00000392185 LCE2DQ5TA82 110 aaPredicted RBP5.46□□□□□ -1.53
SNX9-201ENST00000392185 DSTQ03001 7570 aaKnown RBP5.44□□□□□ -1.54
SNX9-201ENST00000392185 KRTAP4-3Q9BYR4 195 aa5.43□□□□□ -1.54
SNX9-201ENST00000392185 FCGBPQ9Y6R7 5405 aaPredicted RBP5.38□□□□□ -1.55
SNX9-201ENST00000392185 MT1MQ8N339 61 aa5.38□□□□□ -1.55
SNX9-201ENST00000392185 KMT2DO14686 5537 aa5.36□□□□□ -1.55
SNX9-201ENST00000392185 LOC100996750A0A140TA64 210 aa5.34□□□□□ -1.55
SNX9-201ENST00000392185 KRTAP12-4P60329 112 aa5.23□□□□□ -1.57
SNX9-201ENST00000392185 SYNE2Q8WXH0 6885 aaKnown RBP5.22□□□□□ -1.57
SNX9-201ENST00000392185 KRTAP9-6A0A140TA67 174 aa5.22□□□□□ -1.57
SNX9-201ENST00000392185 SSPOA2VEC9 5147 aa5.15□□□□□ -1.59
SNX9-201ENST00000392185 MUC12Q9UKN1 5478 aa5.1□□□□□ -1.59
SNX9-201ENST00000392185 LCE3DQ9BYE3 92 aa5.05□□□□□ -1.6
SNX9-201ENST00000392185 KRTAP9-6A8MVA2 160 aa5.05□□□□□ -1.6
SNX9-201ENST00000392185 MACF1Q9UPN3 7388 aaKnown RBP5.02□□□□□ -1.61
SNX9-201ENST00000392185 MT4P47944 62 aa5.01□□□□□ -1.61
SNX9-201ENST00000392185 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.96□□□□□ -1.62
SNX9-201ENST00000392185 KRTAP9-7A8MTY7 169 aa4.95□□□□□ -1.62
SNX9-201ENST00000392185 LCE3EQ5T5B0 92 aa4.94□□□□□ -1.62
SNX9-201ENST00000392185 LCE5AQ5TCM9 118 aa4.93□□□□□ -1.62
SNX9-201ENST00000392185 LCE1AQ5T7P2 110 aa4.92□□□□□ -1.62
SNX9-201ENST00000392185 KRTAP6-3Q3LI67 103 aa4.87□□□□□ -1.63
SNX9-201ENST00000392185 KRTAP4-9Q9BYQ8 210 aa4.87□□□□□ -1.63
SNX9-201ENST00000392185 MT1AP04731 61 aa4.84□□□□□ -1.63
SNX9-201ENST00000392185 MT3P25713 68 aa4.84□□□□□ -1.64
SNX9-201ENST00000392185 KRTAP2-3P0C7H8 128 aa4.79□□□□□ -1.64
SNX9-201ENST00000392185 KRTAP2-4Q9BYR9 128 aa4.79□□□□□ -1.64
SNX9-201ENST00000392185 KRTAP2-1Q9BYU5 128 aa4.79□□□□□ -1.64
SNX9-201ENST00000392185 KRTAP6-1Q3LI64 71 aa4.76□□□□□ -1.65
SNX9-201ENST00000392185 MDN1Q9NU22 5596 aa4.62□□□□□ -1.67
SNX9-201ENST00000392185 KRTAP20-1Q3LI63 56 aa4.61□□□□□ -1.67
SNX9-201ENST00000392185 LCE1DQ5T752 114 aa4.58□□□□□ -1.68
SNX9-201ENST00000392185 KRTAP6-2Q3LI66 62 aa4.57□□□□□ -1.68
SNX9-201ENST00000392185 LCE1BQ5T7P3 118 aa4.54□□□□□ -1.68
SNX9-201ENST00000392185 KRTAP5-9P26371 169 aa4.53□□□□□ -1.68
SNX9-201ENST00000392185 PRM1P04553 51 aa4.51□□□□□ -1.69
SNX9-201ENST00000392185 KRTAP9-4Q9BYQ2 154 aa4.48□□□□□ -1.69
SNX9-201ENST00000392185 KRTAP2-2Q9BYT5 123 aa4.46□□□□□ -1.69
SNX9-201ENST00000392185 LCE4AQ5TA78 99 aa4.37□□□□□ -1.71
SNX9-201ENST00000392185 NEBP20929 6669 aa4.36□□□□□ -1.71
SNX9-201ENST00000392185 KRTAP4-6Q9BYQ5 205 aa4.21□□□□□ -1.74
SNX9-201ENST00000392185 MUC19Q7Z5P9 8384 aa4.04□□□□□ -1.76
SNX9-201ENST00000392185 KRTAP20-2Q3LI61 65 aa4.01□□□□□ -1.77
SNX9-201ENST00000392185 KRTAP5-5Q701N2 237 aaPredicted RBP3.88□□□□□ -1.79
SNX9-201ENST00000392185 GPR98Q8WXG9 6306 aa3.88□□□□□ -1.79
SNX9-201ENST00000392185 MUC5ACP98088 5654 aa3.73□□□□□ -1.81
SNX9-201ENST00000392185 KRTAP5-4Q6L8H1 288 aa3.67□□□□□ -1.82
SNX9-201ENST00000392185 LCE1CQ5T751 118 aa3.63□□□□□ -1.83
SNX9-201ENST00000392185 LCE1EQ5T753 118 aa3.63□□□□□ -1.83
SNX9-201ENST00000392185 LCE1FQ5T754 118 aa3.63□□□□□ -1.83
SNX9-201ENST00000392185 KRTAP9-9Q9BYP9 154 aa3.6□□□□□ -1.83
SNX9-201ENST00000392185 HMCN1Q96RW7 5635 aa3.59□□□□□ -1.83
SNX9-201ENST00000392185 KRTAP4-11Q9BYQ6 195 aa3.58□□□□□ -1.84
SNX9-201ENST00000392185 KRTAP4-12Q9BQ66 201 aa3.41□□□□□ -1.86
SNX9-201ENST00000392185 KRTAP4-2Q9BYR5 136 aa3.41□□□□□ -1.86
SNX9-201ENST00000392185 KRTAP5-3Q6L8H2 238 aa3.4□□□□□ -1.87
SNX9-201ENST00000392185 KRTAP4-4Q9BYR3 166 aa3.38□□□□□ -1.87
SNX9-201ENST00000392185 AHNAK2Q8IVF2 5795 aa3.34□□□□□ -1.87
SNX9-201ENST00000392185 KRTAP5-2Q701N4 177 aa3.24□□□□□ -1.89
SNX9-201ENST00000392185 KRTAP5-8O75690 187 aa3.14□□□□□ -1.91
SNX9-201ENST00000392185 KRTAP5-10Q6L8G5 202 aa2.92□□□□□ -1.94
SNX9-201ENST00000392185 KRTAP5-1Q6L8H4 278 aa2.9□□□□□ -1.94
SNX9-201ENST00000392185 MUC5BQ9HC84 5762 aaPredicted RBP2.87□□□□□ -1.95
SNX9-201ENST00000392185 AHNAKQ09666 5890 aaKnown RBP2.82□□□□□ -1.96
SNX9-201ENST00000392185 KRTAP21-2Q3LI59 83 aa2.66□□□□□ -1.98
SNX9-201ENST00000392185 KRTAP5-11Q6L8G4 156 aa2.66□□□□□ -1.98
SNX9-201ENST00000392185 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.48□□□□□ -2.01
SNX9-201ENST00000392185 KRTAP5-7Q6L8G8 165 aa2.42□□□□□ -2.02
SNX9-201ENST00000392185 PHGR1C9JFL3 82 aa2.38□□□□□ -2.03
SNX9-201ENST00000392185 KRTAP21-1Q3LI58 79 aa2.06□□□□□ -2.08
SNX9-201ENST00000392185 MUC16Q8WXI7 14507 aa1.59□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 69.4 ms