RNA–Protein interactions for RNA: ENST00000391827.2

NLRP3-205, Transcript of NLR family pyrin domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NLRP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-205ENST00000391827 KRTAP2-4Q9BYR9 128 aa3.67□□□□□ -1.82
NLRP3-205ENST00000391827 KRTAP2-1Q9BYU5 128 aa3.67□□□□□ -1.82
NLRP3-205ENST00000391827 KRTAP19-3Q7Z4W3 81 aa3.56□□□□□ -1.84
NLRP3-205ENST00000391827 MT1GP13640 62 aa3.56□□□□□ -1.84
NLRP3-205ENST00000391827 MT1MQ8N339 61 aa3.54□□□□□ -1.84
NLRP3-205ENST00000391827 FCGBPQ9Y6R7 5405 aaPredicted RBP3.52□□□□□ -1.85
NLRP3-205ENST00000391827 FSIP2Q5CZC0 6907 aa3.51□□□□□ -1.85
NLRP3-205ENST00000391827 KRTAP4-3Q9BYR4 195 aa3.49□□□□□ -1.85
NLRP3-205ENST00000391827 CRCT1Q9UGL9 99 aa3.47□□□□□ -1.85
NLRP3-205ENST00000391827 LCE5AQ5TCM9 118 aa3.47□□□□□ -1.85
NLRP3-205ENST00000391827 LOC100996750A0A140TA64 210 aa3.46□□□□□ -1.86
NLRP3-205ENST00000391827 SPRR2FQ96RM1 72 aa3.41□□□□□ -1.86
NLRP3-205ENST00000391827 MUC12Q9UKN1 5478 aa3.41□□□□□ -1.86
NLRP3-205ENST00000391827 KRTAP12-4P60329 112 aa3.33□□□□□ -1.88
NLRP3-205ENST00000391827 MACF1Q9UPN3 7388 aaKnown RBP3.32□□□□□ -1.88
NLRP3-205ENST00000391827 KRTAP5-9P26371 169 aa3.29□□□□□ -1.88
NLRP3-205ENST00000391827 KRTAP9-7A8MTY7 169 aa3.26□□□□□ -1.89
NLRP3-205ENST00000391827 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.24□□□□□ -1.89
NLRP3-205ENST00000391827 LCE1AQ5T7P2 110 aa3.24□□□□□ -1.89
NLRP3-205ENST00000391827 MT1AP04731 61 aa3.2□□□□□ -1.9
NLRP3-205ENST00000391827 KRTAP5-5Q701N2 237 aaPredicted RBP3.18□□□□□ -1.9
NLRP3-205ENST00000391827 KRTAP6-1Q3LI64 71 aa3.17□□□□□ -1.9
NLRP3-205ENST00000391827 DSTQ03001 7570 aaKnown RBP3.17□□□□□ -1.9
NLRP3-205ENST00000391827 LCE3BQ5TA77 95 aa3.16□□□□□ -1.9
NLRP3-205ENST00000391827 SYNE2Q8WXH0 6885 aaKnown RBP3.16□□□□□ -1.9
NLRP3-205ENST00000391827 LCE4AQ5TA78 99 aa3.16□□□□□ -1.9
NLRP3-205ENST00000391827 SPRR2EP22531 72 aa3.13□□□□□ -1.91
NLRP3-205ENST00000391827 SPRR2BP35325 72 aa3.13□□□□□ -1.91
NLRP3-205ENST00000391827 SPRR2AP35326 72 aa3.13□□□□□ -1.91
NLRP3-205ENST00000391827 MDN1Q9NU22 5596 aa3.12□□□□□ -1.91
NLRP3-205ENST00000391827 KRTAP6-3Q3LI67 103 aa3.1□□□□□ -1.91
NLRP3-205ENST00000391827 KRTAP2-2Q9BYT5 123 aa3.06□□□□□ -1.92
NLRP3-205ENST00000391827 KRTAP4-9Q9BYQ8 210 aa3.06□□□□□ -1.92
NLRP3-205ENST00000391827 KRTAP9-4Q9BYQ2 154 aa3.04□□□□□ -1.92
NLRP3-205ENST00000391827 LCE3DQ9BYE3 92 aa3.02□□□□□ -1.93
NLRP3-205ENST00000391827 KRTAP9-9Q9BYP9 154 aa3.02□□□□□ -1.93
NLRP3-205ENST00000391827 SPRR2DP22532 72 aa3.01□□□□□ -1.93
NLRP3-205ENST00000391827 PRM1P04553 51 aa3□□□□□ -1.93
NLRP3-205ENST00000391827 LCE3EQ5T5B0 92 aa2.98□□□□□ -1.93
NLRP3-205ENST00000391827 SYNE1Q8NF91 8797 aaKnown RBP2.97□□□□□ -1.93
NLRP3-205ENST00000391827 KRTAP20-1Q3LI63 56 aa2.91□□□□□ -1.94
NLRP3-205ENST00000391827 MT3P25713 68 aa2.87□□□□□ -1.95
NLRP3-205ENST00000391827 KRTAP6-2Q3LI66 62 aa2.85□□□□□ -1.95
NLRP3-205ENST00000391827 KRTAP5-4Q6L8H1 288 aa2.85□□□□□ -1.95
NLRP3-205ENST00000391827 OBSCNQ5VST9 7968 aa2.83□□□□□ -1.96
NLRP3-205ENST00000391827 NEBP20929 6669 aa2.82□□□□□ -1.96
NLRP3-205ENST00000391827 LCE1FQ5T754 118 aa2.77□□□□□ -1.97
NLRP3-205ENST00000391827 LCE1EQ5T753 118 aa2.75□□□□□ -1.97
NLRP3-205ENST00000391827 LCE1DQ5T752 114 aa2.66□□□□□ -1.98
NLRP3-205ENST00000391827 KRTAP5-2Q701N4 177 aa2.65□□□□□ -1.98
NLRP3-205ENST00000391827 KRTAP4-6Q9BYQ5 205 aa2.65□□□□□ -1.99
NLRP3-205ENST00000391827 KRTAP20-2Q3LI61 65 aa2.63□□□□□ -1.99
NLRP3-205ENST00000391827 MT4P47944 62 aa2.59□□□□□ -1.99
NLRP3-205ENST00000391827 KRTAP5-3Q6L8H2 238 aa2.53□□□□□ -2
NLRP3-205ENST00000391827 HMCN1Q96RW7 5635 aa2.48□□□□□ -2.01
NLRP3-205ENST00000391827 KRTAP4-12Q9BQ66 201 aa2.46□□□□□ -2.02
NLRP3-205ENST00000391827 GPR98Q8WXG9 6306 aa2.44□□□□□ -2.02
NLRP3-205ENST00000391827 KRTAP5-7Q6L8G8 165 aa2.36□□□□□ -2.03
NLRP3-205ENST00000391827 MUC5ACP98088 5654 aa2.34□□□□□ -2.04
NLRP3-205ENST00000391827 KRTAP5-10Q6L8G5 202 aa2.31□□□□□ -2.04
NLRP3-205ENST00000391827 LCE1CQ5T751 118 aa2.26□□□□□ -2.05
NLRP3-205ENST00000391827 LCE1BQ5T7P3 118 aa2.26□□□□□ -2.05
NLRP3-205ENST00000391827 KRTAP5-1Q6L8H4 278 aa2.26□□□□□ -2.05
NLRP3-205ENST00000391827 KRTAP4-2Q9BYR5 136 aa2.24□□□□□ -2.05
NLRP3-205ENST00000391827 MUC19Q7Z5P9 8384 aa2.23□□□□□ -2.05
NLRP3-205ENST00000391827 AHNAK2Q8IVF2 5795 aa2.21□□□□□ -2.06
NLRP3-205ENST00000391827 KRTAP4-11Q9BYQ6 195 aa2.19□□□□□ -2.06
NLRP3-205ENST00000391827 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.17□□□□□ -2.06
NLRP3-205ENST00000391827 AHNAKQ09666 5890 aaKnown RBP2.14□□□□□ -2.07
NLRP3-205ENST00000391827 KRTAP5-8O75690 187 aa2.13□□□□□ -2.07
NLRP3-205ENST00000391827 MUC5BQ9HC84 5762 aaPredicted RBP2.09□□□□□ -2.08
NLRP3-205ENST00000391827 KRTAP21-2Q3LI59 83 aa2.08□□□□□ -2.08
NLRP3-205ENST00000391827 KRTAP5-11Q6L8G4 156 aa1.96□□□□□ -2.1
NLRP3-205ENST00000391827 KRTAP21-1Q3LI58 79 aa1.95□□□□□ -2.1
NLRP3-205ENST00000391827 KRTAP4-4Q9BYR3 166 aa1.79□□□□□ -2.12
NLRP3-205ENST00000391827 PHGR1C9JFL3 82 aa1.68□□□□□ -2.14
NLRP3-205ENST00000391827 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 38.5 ms