RNA–Protein interactions for RNA: ENST00000390533.1

TRAJ4-201, Transcript of T cell receptor alpha joining 4, humanhuman

APPRIS P1 BASIC

Gene TRAJ4, Length 63 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ4-201ENST00000390533 LCE2AQ5TA79 106 aaPredicted RBP1.49□□□□□ -2.17
TRAJ4-201ENST00000390533 KRTAP9-2Q9BYQ4 174 aa1.47□□□□□ -2.17
TRAJ4-201ENST00000390533 KMT2DO14686 5537 aa1.46□□□□□ -2.18
TRAJ4-201ENST00000390533 KRTAP19-6Q3LI70 58 aa1.46□□□□□ -2.18
TRAJ4-201ENST00000390533 LCE3EQ5T5B0 92 aa1.46□□□□□ -2.18
TRAJ4-201ENST00000390533 LCE2DQ5TA82 110 aaPredicted RBP1.45□□□□□ -2.18
TRAJ4-201ENST00000390533 KRTAP5-5Q701N2 237 aaPredicted RBP1.45□□□□□ -2.18
TRAJ4-201ENST00000390533 LCE3DQ9BYE3 92 aa1.45□□□□□ -2.18
TRAJ4-201ENST00000390533 KRTAP4-3Q9BYR4 195 aa1.45□□□□□ -2.18
TRAJ4-201ENST00000390533 USH2AO75445 5202 aa1.43□□□□□ -2.18
TRAJ4-201ENST00000390533 PRM1P04553 51 aa1.42□□□□□ -2.18
TRAJ4-201ENST00000390533 LCE5AQ5TCM9 118 aa1.42□□□□□ -2.18
TRAJ4-201ENST00000390533 KRTAP9-6A0A140TA67 174 aa1.41□□□□□ -2.18
TRAJ4-201ENST00000390533 LCE3BQ5TA77 95 aa1.41□□□□□ -2.18
TRAJ4-201ENST00000390533 KRTAP6-3Q3LI67 103 aa1.4□□□□□ -2.19
TRAJ4-201ENST00000390533 KRTAP9-7A8MTY7 169 aa1.39□□□□□ -2.19
TRAJ4-201ENST00000390533 SPRR2FQ96RM1 72 aa1.39□□□□□ -2.19
TRAJ4-201ENST00000390533 KRTAP2-2Q9BYT5 123 aa1.39□□□□□ -2.19
TRAJ4-201ENST00000390533 SSPOA2VEC9 5147 aa1.38□□□□□ -2.19
TRAJ4-201ENST00000390533 KRTAP6-1Q3LI64 71 aa1.38□□□□□ -2.19
TRAJ4-201ENST00000390533 KRTAP4-9Q9BYQ8 210 aa1.38□□□□□ -2.19
TRAJ4-201ENST00000390533 CRCT1Q9UGL9 99 aa1.37□□□□□ -2.19
TRAJ4-201ENST00000390533 KRTAP6-2Q3LI66 62 aa1.34□□□□□ -2.19
TRAJ4-201ENST00000390533 SYNE1Q8NF91 8797 aaKnown RBP1.31□□□□□ -2.2
TRAJ4-201ENST00000390533 SPRR2AP35326 72 aa1.31□□□□□ -2.2
TRAJ4-201ENST00000390533 LCE1AQ5T7P2 110 aa1.31□□□□□ -2.2
TRAJ4-201ENST00000390533 KRTAP9-4Q9BYQ2 154 aa1.31□□□□□ -2.2
TRAJ4-201ENST00000390533 FCGBPQ9Y6R7 5405 aaPredicted RBP1.27□□□□□ -2.21
TRAJ4-201ENST00000390533 SPRR2EP22531 72 aa1.26□□□□□ -2.21
TRAJ4-201ENST00000390533 MT3P25713 68 aa1.26□□□□□ -2.21
TRAJ4-201ENST00000390533 SPRR2BP35325 72 aa1.25□□□□□ -2.21
TRAJ4-201ENST00000390533 MUC12Q9UKN1 5478 aa1.24□□□□□ -2.21
TRAJ4-201ENST00000390533 KRTAP5-9P26371 169 aa1.2□□□□□ -2.22
TRAJ4-201ENST00000390533 SPRR2DP22532 72 aa1.19□□□□□ -2.22
TRAJ4-201ENST00000390533 LCE1EQ5T753 118 aa1.16□□□□□ -2.22
TRAJ4-201ENST00000390533 MDN1Q9NU22 5596 aa1.13□□□□□ -2.23
TRAJ4-201ENST00000390533 LCE1DQ5T752 114 aa1.13□□□□□ -2.23
TRAJ4-201ENST00000390533 KRTAP5-4Q6L8H1 288 aa1.11□□□□□ -2.23
TRAJ4-201ENST00000390533 KRTAP5-2Q701N4 177 aa1.08□□□□□ -2.24
TRAJ4-201ENST00000390533 DSTQ03001 7570 aaKnown RBP1.08□□□□□ -2.24
TRAJ4-201ENST00000390533 KRTAP5-10Q6L8G5 202 aa1.04□□□□□ -2.24
TRAJ4-201ENST00000390533 KRTAP5-1Q6L8H4 278 aa1.03□□□□□ -2.24
TRAJ4-201ENST00000390533 OBSCNQ5VST9 7968 aa1.02□□□□□ -2.25
TRAJ4-201ENST00000390533 FSIP2Q5CZC0 6907 aa1.02□□□□□ -2.25
TRAJ4-201ENST00000390533 KRTAP4-11Q9BYQ6 195 aa1.02□□□□□ -2.25
TRAJ4-201ENST00000390533 KRTAP20-2Q3LI61 65 aa1□□□□□ -2.25
TRAJ4-201ENST00000390533 LCE4AQ5TA78 99 aa1□□□□□ -2.25
TRAJ4-201ENST00000390533 MUC5ACP98088 5654 aa1□□□□□ -2.25
TRAJ4-201ENST00000390533 SYNE2Q8WXH0 6885 aaKnown RBP0.99□□□□□ -2.25
TRAJ4-201ENST00000390533 KRTAP9-1A8MXZ3 250 aaPredicted RBP0.99□□□□□ -2.25
TRAJ4-201ENST00000390533 KRTAP21-1Q3LI58 79 aa0.97□□□□□ -2.25
TRAJ4-201ENST00000390533 KRTAP5-3Q6L8H2 238 aa0.96□□□□□ -2.26
TRAJ4-201ENST00000390533 KRTAP4-6Q9BYQ5 205 aa0.96□□□□□ -2.26
TRAJ4-201ENST00000390533 LCE1CQ5T751 118 aa0.95□□□□□ -2.26
TRAJ4-201ENST00000390533 LCE1BQ5T7P3 118 aa0.95□□□□□ -2.26
TRAJ4-201ENST00000390533 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.95□□□□□ -2.26
TRAJ4-201ENST00000390533 KRTAP20-1Q3LI63 56 aa0.93□□□□□ -2.26
TRAJ4-201ENST00000390533 LCE1FQ5T754 118 aa0.93□□□□□ -2.26
TRAJ4-201ENST00000390533 KRTAP4-2Q9BYR5 136 aa0.93□□□□□ -2.26
TRAJ4-201ENST00000390533 MACF1Q9UPN3 7388 aaKnown RBP0.92□□□□□ -2.26
TRAJ4-201ENST00000390533 MT4P47944 62 aa0.9□□□□□ -2.27
TRAJ4-201ENST00000390533 KRTAP21-2Q3LI59 83 aa0.9□□□□□ -2.27
TRAJ4-201ENST00000390533 HMCN1Q96RW7 5635 aa0.87□□□□□ -2.27
TRAJ4-201ENST00000390533 KRTAP5-8O75690 187 aa0.83□□□□□ -2.28
TRAJ4-201ENST00000390533 KRTAP5-7Q6L8G8 165 aa0.83□□□□□ -2.28
TRAJ4-201ENST00000390533 KRTAP5-11Q6L8G4 156 aa0.81□□□□□ -2.28
TRAJ4-201ENST00000390533 MUC5BQ9HC84 5762 aaPredicted RBP0.79□□□□□ -2.28
TRAJ4-201ENST00000390533 KRTAP9-9Q9BYP9 154 aa0.77□□□□□ -2.29
TRAJ4-201ENST00000390533 NEBP20929 6669 aa0.77□□□□□ -2.29
TRAJ4-201ENST00000390533 KRTAP4-4Q9BYR3 166 aa0.73□□□□□ -2.29
TRAJ4-201ENST00000390533 PHGR1C9JFL3 82 aa0.68□□□□□ -2.3
TRAJ4-201ENST00000390533 MUC19Q7Z5P9 8384 aa0.64□□□□□ -2.31
TRAJ4-201ENST00000390533 AHNAK2Q8IVF2 5795 aa0.64□□□□□ -2.31
TRAJ4-201ENST00000390533 KRTAP4-12Q9BQ66 201 aa0.61□□□□□ -2.31
TRAJ4-201ENST00000390533 MUC16Q8WXI7 14507 aa0.56□□□□□ -2.32
TRAJ4-201ENST00000390533 AHNAKQ09666 5890 aaKnown RBP0.43□□□□□ -2.34
TRAJ4-201ENST00000390533 GPR98Q8WXG9 6306 aa0.39□□□□□ -2.35
Retrieved 77 of 20,778 RNA–protein pairs in 9.6 ms