RNA–Protein interactions for RNA: ENST00000389993.7

PSME4-201, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 6,581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-201ENST00000389993 KRTAP12-4P60329 112 aa4.8□□□□□ -1.64
PSME4-201ENST00000389993 KRTAP19-3Q7Z4W3 81 aa4.78□□□□□ -1.64
PSME4-201ENST00000389993 SYNE2Q8WXH0 6885 aaKnown RBP4.76□□□□□ -1.65
PSME4-201ENST00000389993 LCE2AQ5TA79 106 aaPredicted RBP4.72□□□□□ -1.65
PSME4-201ENST00000389993 SPRR5A0A1B0GTR4 108 aa4.7□□□□□ -1.66
PSME4-201ENST00000389993 MT4P47944 62 aa4.69□□□□□ -1.66
PSME4-201ENST00000389993 KRTAP19-6Q3LI70 58 aa4.65□□□□□ -1.67
PSME4-201ENST00000389993 MT1MQ8N339 61 aa4.64□□□□□ -1.67
PSME4-201ENST00000389993 LCE3DQ9BYE3 92 aa4.59□□□□□ -1.67
PSME4-201ENST00000389993 KMT2DO14686 5537 aa4.59□□□□□ -1.68
PSME4-201ENST00000389993 LCE2DQ5TA82 110 aaPredicted RBP4.58□□□□□ -1.68
PSME4-201ENST00000389993 KRTAP19-4Q3LI73 84 aa4.56□□□□□ -1.68
PSME4-201ENST00000389993 KRTAP19-7Q3SYF9 63 aa4.54□□□□□ -1.68
PSME4-201ENST00000389993 KRTAP4-9Q9BYQ8 210 aa4.53□□□□□ -1.68
PSME4-201ENST00000389993 LCE3EQ5T5B0 92 aa4.44□□□□□ -1.7
PSME4-201ENST00000389993 USH2AO75445 5202 aa4.44□□□□□ -1.7
PSME4-201ENST00000389993 KRTAP9-6A0A140TA67 174 aa4.43□□□□□ -1.7
PSME4-201ENST00000389993 KRTAP9-6A8MVA2 160 aa4.31□□□□□ -1.72
PSME4-201ENST00000389993 LCE1BQ5T7P3 118 aa4.3□□□□□ -1.72
PSME4-201ENST00000389993 LCE1DQ5T752 114 aa4.29□□□□□ -1.72
PSME4-201ENST00000389993 PRM1P04553 51 aa4.28□□□□□ -1.72
PSME4-201ENST00000389993 FCGBPQ9Y6R7 5405 aaPredicted RBP4.24□□□□□ -1.73
PSME4-201ENST00000389993 SYNE1Q8NF91 8797 aaKnown RBP4.24□□□□□ -1.73
PSME4-201ENST00000389993 MT3P25713 68 aa4.24□□□□□ -1.73
PSME4-201ENST00000389993 DSTQ03001 7570 aaKnown RBP4.23□□□□□ -1.73
PSME4-201ENST00000389993 KRTAP9-7A8MTY7 169 aa4.21□□□□□ -1.74
PSME4-201ENST00000389993 KRTAP6-1Q3LI64 71 aa4.19□□□□□ -1.74
PSME4-201ENST00000389993 KRTAP2-3P0C7H8 128 aa4.18□□□□□ -1.74
PSME4-201ENST00000389993 KRTAP2-4Q9BYR9 128 aa4.18□□□□□ -1.74
PSME4-201ENST00000389993 KRTAP2-1Q9BYU5 128 aa4.18□□□□□ -1.74
PSME4-201ENST00000389993 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.16□□□□□ -1.74
PSME4-201ENST00000389993 MACF1Q9UPN3 7388 aaKnown RBP4.12□□□□□ -1.75
PSME4-201ENST00000389993 MT1AP04731 61 aa4.12□□□□□ -1.75
PSME4-201ENST00000389993 LCE1AQ5T7P2 110 aa4.11□□□□□ -1.75
PSME4-201ENST00000389993 KRTAP6-2Q3LI66 62 aa4.09□□□□□ -1.75
PSME4-201ENST00000389993 LCE5AQ5TCM9 118 aa4.07□□□□□ -1.76
PSME4-201ENST00000389993 OBSCNQ5VST9 7968 aa4.07□□□□□ -1.76
PSME4-201ENST00000389993 KRTAP20-1Q3LI63 56 aa4.07□□□□□ -1.76
PSME4-201ENST00000389993 KRTAP6-3Q3LI67 103 aa4□□□□□ -1.77
PSME4-201ENST00000389993 MUC12Q9UKN1 5478 aa3.99□□□□□ -1.77
PSME4-201ENST00000389993 SSPOA2VEC9 5147 aa3.92□□□□□ -1.78
PSME4-201ENST00000389993 KRTAP9-4Q9BYQ2 154 aa3.91□□□□□ -1.78
PSME4-201ENST00000389993 KRTAP2-2Q9BYT5 123 aa3.75□□□□□ -1.81
PSME4-201ENST00000389993 LCE4AQ5TA78 99 aa3.68□□□□□ -1.82
PSME4-201ENST00000389993 KRTAP4-6Q9BYQ5 205 aa3.67□□□□□ -1.82
PSME4-201ENST00000389993 LCE1CQ5T751 118 aa3.55□□□□□ -1.84
PSME4-201ENST00000389993 LCE1EQ5T753 118 aa3.55□□□□□ -1.84
PSME4-201ENST00000389993 LCE1FQ5T754 118 aa3.55□□□□□ -1.84
PSME4-201ENST00000389993 KRTAP5-9P26371 169 aa3.54□□□□□ -1.84
PSME4-201ENST00000389993 NEBP20929 6669 aa3.52□□□□□ -1.85
PSME4-201ENST00000389993 KRTAP20-2Q3LI61 65 aa3.37□□□□□ -1.87
PSME4-201ENST00000389993 MDN1Q9NU22 5596 aa3.35□□□□□ -1.87
PSME4-201ENST00000389993 KRTAP4-11Q9BYQ6 195 aa3.3□□□□□ -1.88
PSME4-201ENST00000389993 KRTAP4-4Q9BYR3 166 aa3.28□□□□□ -1.89
PSME4-201ENST00000389993 KRTAP9-9Q9BYP9 154 aa3.24□□□□□ -1.89
PSME4-201ENST00000389993 KRTAP4-12Q9BQ66 201 aa3.24□□□□□ -1.89
PSME4-201ENST00000389993 KRTAP4-2Q9BYR5 136 aa3.24□□□□□ -1.89
PSME4-201ENST00000389993 KRTAP5-5Q701N2 237 aaPredicted RBP3.11□□□□□ -1.91
PSME4-201ENST00000389993 KRTAP5-4Q6L8H1 288 aa3.03□□□□□ -1.92
PSME4-201ENST00000389993 MUC19Q7Z5P9 8384 aa2.99□□□□□ -1.93
PSME4-201ENST00000389993 MUC5ACP98088 5654 aa2.92□□□□□ -1.94
PSME4-201ENST00000389993 KRTAP5-3Q6L8H2 238 aa2.76□□□□□ -1.97
PSME4-201ENST00000389993 HMCN1Q96RW7 5635 aa2.67□□□□□ -1.98
PSME4-201ENST00000389993 GPR98Q8WXG9 6306 aa2.64□□□□□ -1.99
PSME4-201ENST00000389993 KRTAP5-8O75690 187 aa2.64□□□□□ -1.99
PSME4-201ENST00000389993 KRTAP5-2Q701N4 177 aa2.46□□□□□ -2.02
PSME4-201ENST00000389993 KRTAP5-10Q6L8G5 202 aa2.42□□□□□ -2.02
PSME4-201ENST00000389993 AHNAK2Q8IVF2 5795 aa2.35□□□□□ -2.03
PSME4-201ENST00000389993 KRTAP5-1Q6L8H4 278 aa2.27□□□□□ -2.05
PSME4-201ENST00000389993 PHGR1C9JFL3 82 aa2.22□□□□□ -2.05
PSME4-201ENST00000389993 MUC5BQ9HC84 5762 aaPredicted RBP2.18□□□□□ -2.06
PSME4-201ENST00000389993 KRTAP21-2Q3LI59 83 aa2.16□□□□□ -2.06
PSME4-201ENST00000389993 KRTAP5-11Q6L8G4 156 aa2.06□□□□□ -2.08
PSME4-201ENST00000389993 AHNAKQ09666 5890 aaKnown RBP2.06□□□□□ -2.08
PSME4-201ENST00000389993 KRTAP5-7Q6L8G8 165 aa1.79□□□□□ -2.12
PSME4-201ENST00000389993 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.79□□□□□ -2.12
PSME4-201ENST00000389993 KRTAP21-1Q3LI58 79 aa1.74□□□□□ -2.13
PSME4-201ENST00000389993 MUC16Q8WXI7 14507 aa1.36□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 65.4 ms