RNA–Protein interactions for RNA: ENST00000389759.7

PKP4-202, Transcript of plakophilin 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PKP4, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-202ENST00000389759 KRTAP4-7Q9BYR0 210 aa2.86□□□□□ -1.95
PKP4-202ENST00000389759 LCE3DQ9BYE3 92 aa2.84□□□□□ -1.96
PKP4-202ENST00000389759 MT1LQ93083 61 aa2.82□□□□□ -1.96
PKP4-202ENST00000389759 LCE3EQ5T5B0 92 aa2.81□□□□□ -1.96
PKP4-202ENST00000389759 MT1EP04732 61 aa2.78□□□□□ -1.96
PKP4-202ENST00000389759 FCGBPQ9Y6R7 5405 aaPredicted RBP2.78□□□□□ -1.96
PKP4-202ENST00000389759 KRTAP9-6A0A140TA67 174 aa2.76□□□□□ -1.97
PKP4-202ENST00000389759 KRTAP19-3Q7Z4W3 81 aa2.75□□□□□ -1.97
PKP4-202ENST00000389759 SPRR2EP22531 72 aa2.72□□□□□ -1.97
PKP4-202ENST00000389759 SPRR2BP35325 72 aa2.72□□□□□ -1.97
PKP4-202ENST00000389759 SPRR2AP35326 72 aa2.72□□□□□ -1.97
PKP4-202ENST00000389759 KRTAP2-3P0C7H8 128 aa2.68□□□□□ -1.98
PKP4-202ENST00000389759 KRTAP2-4Q9BYR9 128 aa2.68□□□□□ -1.98
PKP4-202ENST00000389759 KRTAP2-1Q9BYU5 128 aa2.68□□□□□ -1.98
PKP4-202ENST00000389759 MT1MQ8N339 61 aa2.67□□□□□ -1.98
PKP4-202ENST00000389759 KRTAP19-7Q3SYF9 63 aa2.66□□□□□ -1.98
PKP4-202ENST00000389759 LOC100996750A0A140TA64 210 aa2.66□□□□□ -1.98
PKP4-202ENST00000389759 PRM1P04553 51 aa2.65□□□□□ -1.99
PKP4-202ENST00000389759 MUC12Q9UKN1 5478 aa2.64□□□□□ -1.99
PKP4-202ENST00000389759 SYNE2Q8WXH0 6885 aaKnown RBP2.63□□□□□ -1.99
PKP4-202ENST00000389759 KRTAP4-3Q9BYR4 195 aa2.63□□□□□ -1.99
PKP4-202ENST00000389759 KRTAP19-6Q3LI70 58 aa2.62□□□□□ -1.99
PKP4-202ENST00000389759 SPRR2DP22532 72 aa2.62□□□□□ -1.99
PKP4-202ENST00000389759 KRTAP9-6A8MVA2 160 aa2.59□□□□□ -2
PKP4-202ENST00000389759 SSPOA2VEC9 5147 aa2.57□□□□□ -2
PKP4-202ENST00000389759 MT3P25713 68 aa2.55□□□□□ -2
PKP4-202ENST00000389759 KRTAP9-7A8MTY7 169 aa2.54□□□□□ -2
PKP4-202ENST00000389759 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.52□□□□□ -2.01
PKP4-202ENST00000389759 KRTAP4-9Q9BYQ8 210 aa2.52□□□□□ -2.01
PKP4-202ENST00000389759 MT1AP04731 61 aa2.49□□□□□ -2.01
PKP4-202ENST00000389759 KRTAP9-4Q9BYQ2 154 aa2.44□□□□□ -2.02
PKP4-202ENST00000389759 LCE5AQ5TCM9 118 aa2.44□□□□□ -2.02
PKP4-202ENST00000389759 MACF1Q9UPN3 7388 aaKnown RBP2.43□□□□□ -2.02
PKP4-202ENST00000389759 KRTAP6-3Q3LI67 103 aa2.43□□□□□ -2.02
PKP4-202ENST00000389759 LCE4AQ5TA78 99 aa2.39□□□□□ -2.03
PKP4-202ENST00000389759 KRTAP6-1Q3LI64 71 aa2.37□□□□□ -2.03
PKP4-202ENST00000389759 KRTAP6-2Q3LI66 62 aa2.35□□□□□ -2.03
PKP4-202ENST00000389759 MDN1Q9NU22 5596 aa2.34□□□□□ -2.03
PKP4-202ENST00000389759 MT4P47944 62 aa2.34□□□□□ -2.04
PKP4-202ENST00000389759 LCE1DQ5T752 114 aa2.34□□□□□ -2.04
PKP4-202ENST00000389759 LCE1BQ5T7P3 118 aa2.33□□□□□ -2.04
PKP4-202ENST00000389759 KRTAP9-9Q9BYP9 154 aa2.33□□□□□ -2.04
PKP4-202ENST00000389759 KRTAP20-1Q3LI63 56 aa2.33□□□□□ -2.04
PKP4-202ENST00000389759 LCE1AQ5T7P2 110 aa2.25□□□□□ -2.05
PKP4-202ENST00000389759 KRTAP5-9P26371 169 aa2.22□□□□□ -2.05
PKP4-202ENST00000389759 KRTAP2-2Q9BYT5 123 aa2.21□□□□□ -2.06
PKP4-202ENST00000389759 LCE1FQ5T754 118 aa2.2□□□□□ -2.06
PKP4-202ENST00000389759 NEBP20929 6669 aa2.16□□□□□ -2.06
PKP4-202ENST00000389759 MUC19Q7Z5P9 8384 aa2.13□□□□□ -2.07
PKP4-202ENST00000389759 LCE1EQ5T753 118 aa1.99□□□□□ -2.09
PKP4-202ENST00000389759 KRTAP4-12Q9BQ66 201 aa1.97□□□□□ -2.09
PKP4-202ENST00000389759 KRTAP5-5Q701N2 237 aaPredicted RBP1.96□□□□□ -2.1
PKP4-202ENST00000389759 KRTAP4-11Q9BYQ6 195 aa1.95□□□□□ -2.1
PKP4-202ENST00000389759 KRTAP4-6Q9BYQ5 205 aa1.89□□□□□ -2.11
PKP4-202ENST00000389759 LCE1CQ5T751 118 aa1.87□□□□□ -2.11
PKP4-202ENST00000389759 GPR98Q8WXG9 6306 aa1.86□□□□□ -2.11
PKP4-202ENST00000389759 KRTAP20-2Q3LI61 65 aa1.83□□□□□ -2.12
PKP4-202ENST00000389759 MUC5ACP98088 5654 aa1.8□□□□□ -2.12
PKP4-202ENST00000389759 KRTAP5-4Q6L8H1 288 aa1.77□□□□□ -2.13
PKP4-202ENST00000389759 HMCN1Q96RW7 5635 aa1.72□□□□□ -2.13
PKP4-202ENST00000389759 KRTAP5-3Q6L8H2 238 aa1.69□□□□□ -2.14
PKP4-202ENST00000389759 KRTAP4-4Q9BYR3 166 aa1.69□□□□□ -2.14
PKP4-202ENST00000389759 KRTAP4-2Q9BYR5 136 aa1.58□□□□□ -2.16
PKP4-202ENST00000389759 AHNAK2Q8IVF2 5795 aa1.57□□□□□ -2.16
PKP4-202ENST00000389759 MUC5BQ9HC84 5762 aaPredicted RBP1.54□□□□□ -2.16
PKP4-202ENST00000389759 KRTAP5-2Q701N4 177 aa1.53□□□□□ -2.16
PKP4-202ENST00000389759 KRTAP5-10Q6L8G5 202 aa1.52□□□□□ -2.17
PKP4-202ENST00000389759 KRTAP5-8O75690 187 aa1.52□□□□□ -2.17
PKP4-202ENST00000389759 KRTAP5-7Q6L8G8 165 aa1.44□□□□□ -2.18
PKP4-202ENST00000389759 KRTAP5-1Q6L8H4 278 aa1.37□□□□□ -2.19
PKP4-202ENST00000389759 AHNAKQ09666 5890 aaKnown RBP1.37□□□□□ -2.19
PKP4-202ENST00000389759 KRTAP21-2Q3LI59 83 aa1.27□□□□□ -2.21
PKP4-202ENST00000389759 KRTAP5-11Q6L8G4 156 aa1.25□□□□□ -2.21
PKP4-202ENST00000389759 KRTAP21-1Q3LI58 79 aa1.25□□□□□ -2.21
PKP4-202ENST00000389759 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.17□□□□□ -2.22
PKP4-202ENST00000389759 PHGR1C9JFL3 82 aa1.15□□□□□ -2.23
PKP4-202ENST00000389759 MUC16Q8WXI7 14507 aa0.72□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 46.7 ms