RNA–Protein interactions for RNA: ENST00000389609.8

CCDC149-202, Transcript of coiled-coil domain containing 149, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CCDC149, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-202ENST00000389609 KRTAP9-2Q9BYQ4 174 aa3.91□□□□□ -1.78
CCDC149-202ENST00000389609 KRTAP4-7Q9BYR0 210 aa3.91□□□□□ -1.78
CCDC149-202ENST00000389609 FSIP2Q5CZC0 6907 aa3.88□□□□□ -1.79
CCDC149-202ENST00000389609 KRTAP19-6Q3LI70 58 aa3.87□□□□□ -1.79
CCDC149-202ENST00000389609 CRCT1Q9UGL9 99 aa3.74□□□□□ -1.81
CCDC149-202ENST00000389609 KRTAP9-6A0A140TA67 174 aa3.72□□□□□ -1.81
CCDC149-202ENST00000389609 MT1GP13640 62 aa3.69□□□□□ -1.82
CCDC149-202ENST00000389609 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.68□□□□□ -1.82
CCDC149-202ENST00000389609 FCGBPQ9Y6R7 5405 aaPredicted RBP3.68□□□□□ -1.82
CCDC149-202ENST00000389609 KRTAP4-3Q9BYR4 195 aa3.68□□□□□ -1.82
CCDC149-202ENST00000389609 KRTAP19-3Q7Z4W3 81 aa3.66□□□□□ -1.82
CCDC149-202ENST00000389609 MT1MQ8N339 61 aa3.64□□□□□ -1.83
CCDC149-202ENST00000389609 MUC12Q9UKN1 5478 aa3.63□□□□□ -1.83
CCDC149-202ENST00000389609 KRTAP4-12Q9BQ66 201 aa3.61□□□□□ -1.83
CCDC149-202ENST00000389609 KRTAP12-4P60329 112 aa3.59□□□□□ -1.83
CCDC149-202ENST00000389609 LCE3BQ5TA77 95 aa3.58□□□□□ -1.84
CCDC149-202ENST00000389609 LCE5AQ5TCM9 118 aa3.53□□□□□ -1.84
CCDC149-202ENST00000389609 KRTAP9-9Q9BYP9 154 aa3.5□□□□□ -1.85
CCDC149-202ENST00000389609 KRTAP9-4Q9BYQ2 154 aa3.5□□□□□ -1.85
CCDC149-202ENST00000389609 SPRR2FQ96RM1 72 aa3.47□□□□□ -1.85
CCDC149-202ENST00000389609 MACF1Q9UPN3 7388 aaKnown RBP3.46□□□□□ -1.85
CCDC149-202ENST00000389609 MT1AP04731 61 aa3.46□□□□□ -1.86
CCDC149-202ENST00000389609 DSTQ03001 7570 aaKnown RBP3.45□□□□□ -1.86
CCDC149-202ENST00000389609 SYNE2Q8WXH0 6885 aaKnown RBP3.42□□□□□ -1.86
CCDC149-202ENST00000389609 KRTAP5-9P26371 169 aa3.4□□□□□ -1.86
CCDC149-202ENST00000389609 KRTAP6-3Q3LI67 103 aa3.38□□□□□ -1.87
CCDC149-202ENST00000389609 KRTAP9-7A8MTY7 169 aa3.37□□□□□ -1.87
CCDC149-202ENST00000389609 LCE1DQ5T752 114 aa3.35□□□□□ -1.87
CCDC149-202ENST00000389609 LCE4AQ5TA78 99 aa3.34□□□□□ -1.87
CCDC149-202ENST00000389609 MDN1Q9NU22 5596 aa3.3□□□□□ -1.88
CCDC149-202ENST00000389609 KRTAP6-1Q3LI64 71 aa3.28□□□□□ -1.88
CCDC149-202ENST00000389609 LCE1AQ5T7P2 110 aa3.28□□□□□ -1.88
CCDC149-202ENST00000389609 KRTAP4-9Q9BYQ8 210 aa3.28□□□□□ -1.88
CCDC149-202ENST00000389609 SPRR2EP22531 72 aa3.26□□□□□ -1.89
CCDC149-202ENST00000389609 SPRR2BP35325 72 aa3.26□□□□□ -1.89
CCDC149-202ENST00000389609 SPRR2AP35326 72 aa3.26□□□□□ -1.89
CCDC149-202ENST00000389609 KRTAP5-5Q701N2 237 aaPredicted RBP3.26□□□□□ -1.89
CCDC149-202ENST00000389609 SYNE1Q8NF91 8797 aaKnown RBP3.26□□□□□ -1.89
CCDC149-202ENST00000389609 LCE3DQ9BYE3 92 aa3.25□□□□□ -1.89
CCDC149-202ENST00000389609 PRM1P04553 51 aa3.24□□□□□ -1.89
CCDC149-202ENST00000389609 LCE3EQ5T5B0 92 aa3.24□□□□□ -1.89
CCDC149-202ENST00000389609 KRTAP4-2Q9BYR5 136 aa3.18□□□□□ -1.9
CCDC149-202ENST00000389609 SPRR2DP22532 72 aa3.15□□□□□ -1.91
CCDC149-202ENST00000389609 KRTAP4-11Q9BYQ6 195 aa3.14□□□□□ -1.91
CCDC149-202ENST00000389609 NEBP20929 6669 aa3.12□□□□□ -1.91
CCDC149-202ENST00000389609 KRTAP2-2Q9BYT5 123 aa3.09□□□□□ -1.91
CCDC149-202ENST00000389609 MT3P25713 68 aa3.01□□□□□ -1.93
CCDC149-202ENST00000389609 KRTAP6-2Q3LI66 62 aa3.01□□□□□ -1.93
CCDC149-202ENST00000389609 KRTAP20-1Q3LI63 56 aa2.93□□□□□ -1.94
CCDC149-202ENST00000389609 OBSCNQ5VST9 7968 aa2.87□□□□□ -1.95
CCDC149-202ENST00000389609 KRTAP5-4Q6L8H1 288 aa2.86□□□□□ -1.95
CCDC149-202ENST00000389609 LCE1FQ5T754 118 aa2.82□□□□□ -1.96
CCDC149-202ENST00000389609 KRTAP5-3Q6L8H2 238 aa2.81□□□□□ -1.96
CCDC149-202ENST00000389609 LCE1EQ5T753 118 aa2.78□□□□□ -1.96
CCDC149-202ENST00000389609 MT4P47944 62 aa2.72□□□□□ -1.97
CCDC149-202ENST00000389609 KRTAP5-2Q701N4 177 aa2.71□□□□□ -1.98
CCDC149-202ENST00000389609 KRTAP20-2Q3LI61 65 aa2.65□□□□□ -1.98
CCDC149-202ENST00000389609 HMCN1Q96RW7 5635 aa2.57□□□□□ -2
CCDC149-202ENST00000389609 MUC5ACP98088 5654 aa2.46□□□□□ -2.02
CCDC149-202ENST00000389609 GPR98Q8WXG9 6306 aa2.45□□□□□ -2.02
CCDC149-202ENST00000389609 AHNAK2Q8IVF2 5795 aa2.42□□□□□ -2.02
CCDC149-202ENST00000389609 KRTAP5-1Q6L8H4 278 aa2.39□□□□□ -2.03
CCDC149-202ENST00000389609 KRTAP5-10Q6L8G5 202 aa2.38□□□□□ -2.03
CCDC149-202ENST00000389609 LCE1CQ5T751 118 aa2.34□□□□□ -2.03
CCDC149-202ENST00000389609 LCE1BQ5T7P3 118 aa2.34□□□□□ -2.03
CCDC149-202ENST00000389609 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.27□□□□□ -2.05
CCDC149-202ENST00000389609 KRTAP5-8O75690 187 aa2.22□□□□□ -2.05
CCDC149-202ENST00000389609 KRTAP5-7Q6L8G8 165 aa2.17□□□□□ -2.06
CCDC149-202ENST00000389609 KRTAP21-2Q3LI59 83 aa2.15□□□□□ -2.07
CCDC149-202ENST00000389609 KRTAP5-11Q6L8G4 156 aa2.12□□□□□ -2.07
CCDC149-202ENST00000389609 KRTAP21-1Q3LI58 79 aa2.11□□□□□ -2.07
CCDC149-202ENST00000389609 MUC5BQ9HC84 5762 aaPredicted RBP1.99□□□□□ -2.09
CCDC149-202ENST00000389609 KRTAP4-4Q9BYR3 166 aa1.94□□□□□ -2.1
CCDC149-202ENST00000389609 AHNAKQ09666 5890 aaKnown RBP1.92□□□□□ -2.1
CCDC149-202ENST00000389609 MUC19Q7Z5P9 8384 aa1.85□□□□□ -2.11
CCDC149-202ENST00000389609 PHGR1C9JFL3 82 aa1.71□□□□□ -2.14
CCDC149-202ENST00000389609 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 81.2 ms