RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 SPRR2BP35325 72 aa4.28□□□□□ -1.72
TRAPPC9-201ENST00000389328 SPRR2AP35326 72 aa4.28□□□□□ -1.72
TRAPPC9-201ENST00000389328 KRTAP9-6A8MVA2 160 aa4.26□□□□□ -1.73
TRAPPC9-201ENST00000389328 LOC100996750A0A140TA64 210 aa4.25□□□□□ -1.73
TRAPPC9-201ENST00000389328 KRTAP19-7Q3SYF9 63 aa4.24□□□□□ -1.73
TRAPPC9-201ENST00000389328 KMT2DO14686 5537 aa4.21□□□□□ -1.74
TRAPPC9-201ENST00000389328 KRTAP4-3Q9BYR4 195 aa4.21□□□□□ -1.74
TRAPPC9-201ENST00000389328 KRTAP2-3P0C7H8 128 aa4.19□□□□□ -1.74
TRAPPC9-201ENST00000389328 KRTAP2-4Q9BYR9 128 aa4.19□□□□□ -1.74
TRAPPC9-201ENST00000389328 KRTAP2-1Q9BYU5 128 aa4.19□□□□□ -1.74
TRAPPC9-201ENST00000389328 LCE2DQ5TA82 110 aaPredicted RBP4.17□□□□□ -1.74
TRAPPC9-201ENST00000389328 USH2AO75445 5202 aa4.17□□□□□ -1.74
TRAPPC9-201ENST00000389328 LCE2AQ5TA79 106 aaPredicted RBP4.15□□□□□ -1.74
TRAPPC9-201ENST00000389328 SPRR2DP22532 72 aa4.15□□□□□ -1.75
TRAPPC9-201ENST00000389328 KRTAP19-3Q7Z4W3 81 aa4.14□□□□□ -1.75
TRAPPC9-201ENST00000389328 LCE3DQ9BYE3 92 aa4.12□□□□□ -1.75
TRAPPC9-201ENST00000389328 FCGBPQ9Y6R7 5405 aaPredicted RBP4.11□□□□□ -1.75
TRAPPC9-201ENST00000389328 KRTAP9-7A8MTY7 169 aa4.09□□□□□ -1.75
TRAPPC9-201ENST00000389328 MT1MQ8N339 61 aa4.08□□□□□ -1.76
TRAPPC9-201ENST00000389328 DSTQ03001 7570 aaKnown RBP4.07□□□□□ -1.76
TRAPPC9-201ENST00000389328 LCE3EQ5T5B0 92 aa4.07□□□□□ -1.76
TRAPPC9-201ENST00000389328 KRTAP4-9Q9BYQ8 210 aa4□□□□□ -1.77
TRAPPC9-201ENST00000389328 KRTAP19-6Q3LI70 58 aa3.95□□□□□ -1.78
TRAPPC9-201ENST00000389328 PRM1P04553 51 aa3.94□□□□□ -1.78
TRAPPC9-201ENST00000389328 SYNE2Q8WXH0 6885 aaKnown RBP3.94□□□□□ -1.78
TRAPPC9-201ENST00000389328 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.89□□□□□ -1.79
TRAPPC9-201ENST00000389328 KRTAP20-1Q3LI63 56 aa3.88□□□□□ -1.79
TRAPPC9-201ENST00000389328 KRTAP6-3Q3LI67 103 aa3.8□□□□□ -1.8
TRAPPC9-201ENST00000389328 MUC12Q9UKN1 5478 aa3.79□□□□□ -1.8
TRAPPC9-201ENST00000389328 MACF1Q9UPN3 7388 aaKnown RBP3.73□□□□□ -1.81
TRAPPC9-201ENST00000389328 MT1AP04731 61 aa3.72□□□□□ -1.81
TRAPPC9-201ENST00000389328 KRTAP6-1Q3LI64 71 aa3.72□□□□□ -1.81
TRAPPC9-201ENST00000389328 MT4P47944 62 aa3.68□□□□□ -1.82
TRAPPC9-201ENST00000389328 MT3P25713 68 aa3.65□□□□□ -1.82
TRAPPC9-201ENST00000389328 LCE5AQ5TCM9 118 aa3.65□□□□□ -1.83
TRAPPC9-201ENST00000389328 SSPOA2VEC9 5147 aa3.62□□□□□ -1.83
TRAPPC9-201ENST00000389328 KRTAP6-2Q3LI66 62 aa3.58□□□□□ -1.84
TRAPPC9-201ENST00000389328 KRTAP2-2Q9BYT5 123 aa3.58□□□□□ -1.84
TRAPPC9-201ENST00000389328 LCE1AQ5T7P2 110 aa3.52□□□□□ -1.85
TRAPPC9-201ENST00000389328 GPR98Q8WXG9 6306 aa3.51□□□□□ -1.85
TRAPPC9-201ENST00000389328 NEBP20929 6669 aa3.44□□□□□ -1.86
TRAPPC9-201ENST00000389328 KRTAP9-4Q9BYQ2 154 aa3.44□□□□□ -1.86
TRAPPC9-201ENST00000389328 LCE1DQ5T752 114 aa3.43□□□□□ -1.86
TRAPPC9-201ENST00000389328 LCE1BQ5T7P3 118 aa3.42□□□□□ -1.86
TRAPPC9-201ENST00000389328 MDN1Q9NU22 5596 aa3.36□□□□□ -1.87
TRAPPC9-201ENST00000389328 MUC19Q7Z5P9 8384 aa3.34□□□□□ -1.88
TRAPPC9-201ENST00000389328 LCE4AQ5TA78 99 aa3.31□□□□□ -1.88
TRAPPC9-201ENST00000389328 KRTAP5-5Q701N2 237 aaPredicted RBP3.25□□□□□ -1.89
TRAPPC9-201ENST00000389328 KRTAP5-9P26371 169 aa3.2□□□□□ -1.9
TRAPPC9-201ENST00000389328 KRTAP4-11Q9BYQ6 195 aa2.97□□□□□ -1.93
TRAPPC9-201ENST00000389328 KRTAP9-9Q9BYP9 154 aa2.95□□□□□ -1.94
TRAPPC9-201ENST00000389328 KRTAP4-6Q9BYQ5 205 aa2.95□□□□□ -1.94
TRAPPC9-201ENST00000389328 LCE1EQ5T753 118 aa2.84□□□□□ -1.96
TRAPPC9-201ENST00000389328 KRTAP20-2Q3LI61 65 aa2.8□□□□□ -1.96
TRAPPC9-201ENST00000389328 LCE1CQ5T751 118 aa2.78□□□□□ -1.96
TRAPPC9-201ENST00000389328 LCE1FQ5T754 118 aa2.78□□□□□ -1.96
TRAPPC9-201ENST00000389328 MUC5ACP98088 5654 aa2.73□□□□□ -1.97
TRAPPC9-201ENST00000389328 AHNAK2Q8IVF2 5795 aa2.67□□□□□ -1.98
TRAPPC9-201ENST00000389328 HMCN1Q96RW7 5635 aa2.64□□□□□ -1.99
TRAPPC9-201ENST00000389328 KRTAP5-4Q6L8H1 288 aa2.63□□□□□ -1.99
TRAPPC9-201ENST00000389328 KRTAP5-3Q6L8H2 238 aa2.63□□□□□ -1.99
TRAPPC9-201ENST00000389328 KRTAP4-4Q9BYR3 166 aa2.6□□□□□ -1.99
TRAPPC9-201ENST00000389328 KRTAP4-12Q9BQ66 201 aa2.5□□□□□ -2.01
TRAPPC9-201ENST00000389328 KRTAP4-2Q9BYR5 136 aa2.5□□□□□ -2.01
TRAPPC9-201ENST00000389328 KRTAP5-10Q6L8G5 202 aa2.44□□□□□ -2.02
TRAPPC9-201ENST00000389328 KRTAP5-2Q701N4 177 aa2.34□□□□□ -2.03
TRAPPC9-201ENST00000389328 KRTAP5-8O75690 187 aa2.31□□□□□ -2.04
TRAPPC9-201ENST00000389328 AHNAKQ09666 5890 aaKnown RBP2.25□□□□□ -2.05
TRAPPC9-201ENST00000389328 KRTAP21-2Q3LI59 83 aa2.1□□□□□ -2.07
TRAPPC9-201ENST00000389328 KRTAP5-7Q6L8G8 165 aa2.09□□□□□ -2.07
TRAPPC9-201ENST00000389328 KRTAP5-1Q6L8H4 278 aa2.09□□□□□ -2.08
TRAPPC9-201ENST00000389328 MUC5BQ9HC84 5762 aaPredicted RBP2.07□□□□□ -2.08
TRAPPC9-201ENST00000389328 PHGR1C9JFL3 82 aa2.03□□□□□ -2.09
TRAPPC9-201ENST00000389328 KRTAP21-1Q3LI58 79 aa2□□□□□ -2.09
TRAPPC9-201ENST00000389328 KRTAP5-11Q6L8G4 156 aa1.92□□□□□ -2.1
TRAPPC9-201ENST00000389328 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.89□□□□□ -2.11
TRAPPC9-201ENST00000389328 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 208.5 ms