RNA–Protein interactions for RNA: ENST00000383773.8

NR1D2-202, Transcript of nuclear receptor subfamily 1 group D member 2, humanhuman

TSL 1 (best)

Gene NR1D2, Length 3,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1D2-202ENST00000383773 MT1LQ93083 61 aa6.08□□□□□ -1.44
NR1D2-202ENST00000383773 MT1EP04732 61 aa6.06□□□□□ -1.44
NR1D2-202ENST00000383773 KRTAP9-2Q9BYQ4 174 aa6.05□□□□□ -1.44
NR1D2-202ENST00000383773 LOC100996750A0A140TA64 210 aa6.03□□□□□ -1.44
NR1D2-202ENST00000383773 CRCT1Q9UGL9 99 aa5.97□□□□□ -1.45
NR1D2-202ENST00000383773 KRTAP4-3Q9BYR4 195 aa5.96□□□□□ -1.46
NR1D2-202ENST00000383773 MACF1Q9UPN3 7388 aaKnown RBP5.96□□□□□ -1.46
NR1D2-202ENST00000383773 KRTAP12-4P60329 112 aa5.93□□□□□ -1.46
NR1D2-202ENST00000383773 MUC12Q9UKN1 5478 aa5.91□□□□□ -1.46
NR1D2-202ENST00000383773 MT1GP13640 62 aa5.89□□□□□ -1.47
NR1D2-202ENST00000383773 KRTAP19-4Q3LI73 84 aa5.83□□□□□ -1.48
NR1D2-202ENST00000383773 DSTQ03001 7570 aaKnown RBP5.82□□□□□ -1.48
NR1D2-202ENST00000383773 SYNE2Q8WXH0 6885 aaKnown RBP5.81□□□□□ -1.48
NR1D2-202ENST00000383773 SPRR2FQ96RM1 72 aa5.77□□□□□ -1.49
NR1D2-202ENST00000383773 KRTAP19-3Q7Z4W3 81 aa5.76□□□□□ -1.49
NR1D2-202ENST00000383773 MT1MQ8N339 61 aa5.69□□□□□ -1.5
NR1D2-202ENST00000383773 KRTAP4-9Q9BYQ8 210 aa5.65□□□□□ -1.5
NR1D2-202ENST00000383773 LCE5AQ5TCM9 118 aa5.63□□□□□ -1.51
NR1D2-202ENST00000383773 SYNE1Q8NF91 8797 aaKnown RBP5.63□□□□□ -1.51
NR1D2-202ENST00000383773 OBSCNQ5VST9 7968 aa5.62□□□□□ -1.51
NR1D2-202ENST00000383773 LCE3BQ5TA77 95 aa5.62□□□□□ -1.51
NR1D2-202ENST00000383773 MDN1Q9NU22 5596 aa5.6□□□□□ -1.51
NR1D2-202ENST00000383773 KRTAP5-9P26371 169 aa5.58□□□□□ -1.52
NR1D2-202ENST00000383773 LCE1AQ5T7P2 110 aa5.48□□□□□ -1.53
NR1D2-202ENST00000383773 KRTAP9-6A0A140TA67 174 aa5.44□□□□□ -1.54
NR1D2-202ENST00000383773 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.43□□□□□ -1.54
NR1D2-202ENST00000383773 KRTAP9-7A8MTY7 169 aa5.39□□□□□ -1.55
NR1D2-202ENST00000383773 SPRR2EP22531 72 aa5.39□□□□□ -1.55
NR1D2-202ENST00000383773 SPRR2BP35325 72 aa5.39□□□□□ -1.55
NR1D2-202ENST00000383773 SPRR2AP35326 72 aa5.39□□□□□ -1.55
NR1D2-202ENST00000383773 PRM1P04553 51 aa5.34□□□□□ -1.56
NR1D2-202ENST00000383773 KRTAP6-3Q3LI67 103 aa5.34□□□□□ -1.56
NR1D2-202ENST00000383773 LCE3DQ9BYE3 92 aa5.29□□□□□ -1.56
NR1D2-202ENST00000383773 KRTAP6-1Q3LI64 71 aa5.25□□□□□ -1.57
NR1D2-202ENST00000383773 LCE3EQ5T5B0 92 aa5.23□□□□□ -1.57
NR1D2-202ENST00000383773 KRTAP5-5Q701N2 237 aaPredicted RBP5.23□□□□□ -1.57
NR1D2-202ENST00000383773 MT1AP04731 61 aa5.19□□□□□ -1.58
NR1D2-202ENST00000383773 SPRR2DP22532 72 aa5.18□□□□□ -1.58
NR1D2-202ENST00000383773 NEBP20929 6669 aa5.07□□□□□ -1.6
NR1D2-202ENST00000383773 KRTAP6-2Q3LI66 62 aa4.99□□□□□ -1.61
NR1D2-202ENST00000383773 KRTAP9-4Q9BYQ2 154 aa4.78□□□□□ -1.64
NR1D2-202ENST00000383773 KRTAP5-4Q6L8H1 288 aa4.72□□□□□ -1.65
NR1D2-202ENST00000383773 KRTAP2-2Q9BYT5 123 aa4.68□□□□□ -1.66
NR1D2-202ENST00000383773 KRTAP4-6Q9BYQ5 205 aa4.55□□□□□ -1.68
NR1D2-202ENST00000383773 MT4P47944 62 aa4.55□□□□□ -1.68
NR1D2-202ENST00000383773 MT3P25713 68 aa4.54□□□□□ -1.68
NR1D2-202ENST00000383773 LCE4AQ5TA78 99 aa4.53□□□□□ -1.68
NR1D2-202ENST00000383773 LCE1EQ5T753 118 aa4.51□□□□□ -1.69
NR1D2-202ENST00000383773 KRTAP20-1Q3LI63 56 aa4.45□□□□□ -1.7
NR1D2-202ENST00000383773 HMCN1Q96RW7 5635 aa4.44□□□□□ -1.7
NR1D2-202ENST00000383773 KRTAP20-2Q3LI61 65 aa4.43□□□□□ -1.7
NR1D2-202ENST00000383773 LCE1DQ5T752 114 aa4.39□□□□□ -1.71
NR1D2-202ENST00000383773 KRTAP5-2Q701N4 177 aa4.33□□□□□ -1.72
NR1D2-202ENST00000383773 KRTAP5-3Q6L8H2 238 aa4.26□□□□□ -1.73
NR1D2-202ENST00000383773 MUC19Q7Z5P9 8384 aa4.19□□□□□ -1.74
NR1D2-202ENST00000383773 KRTAP4-11Q9BYQ6 195 aa4.05□□□□□ -1.76
NR1D2-202ENST00000383773 MUC5ACP98088 5654 aa4.04□□□□□ -1.76
NR1D2-202ENST00000383773 KRTAP4-12Q9BQ66 201 aa4.03□□□□□ -1.76
NR1D2-202ENST00000383773 KRTAP9-9Q9BYP9 154 aa3.9□□□□□ -1.78
NR1D2-202ENST00000383773 LCE1BQ5T7P3 118 aa3.81□□□□□ -1.8
NR1D2-202ENST00000383773 AHNAK2Q8IVF2 5795 aa3.78□□□□□ -1.8
NR1D2-202ENST00000383773 KRTAP5-10Q6L8G5 202 aa3.75□□□□□ -1.81
NR1D2-202ENST00000383773 KRTAP5-1Q6L8H4 278 aa3.74□□□□□ -1.81
NR1D2-202ENST00000383773 KRTAP4-2Q9BYR5 136 aa3.66□□□□□ -1.82
NR1D2-202ENST00000383773 KRTAP5-8O75690 187 aa3.64□□□□□ -1.83
NR1D2-202ENST00000383773 LCE1CQ5T751 118 aa3.62□□□□□ -1.83
NR1D2-202ENST00000383773 LCE1FQ5T754 118 aa3.6□□□□□ -1.83
NR1D2-202ENST00000383773 KRTAP5-7Q6L8G8 165 aa3.52□□□□□ -1.85
NR1D2-202ENST00000383773 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.39□□□□□ -1.87
NR1D2-202ENST00000383773 KRTAP21-2Q3LI59 83 aa3.3□□□□□ -1.88
NR1D2-202ENST00000383773 KRTAP4-4Q9BYR3 166 aa3.3□□□□□ -1.88
NR1D2-202ENST00000383773 GPR98Q8WXG9 6306 aa3.29□□□□□ -1.88
NR1D2-202ENST00000383773 KRTAP21-1Q3LI58 79 aa3.25□□□□□ -1.89
NR1D2-202ENST00000383773 MUC5BQ9HC84 5762 aaPredicted RBP3.22□□□□□ -1.89
NR1D2-202ENST00000383773 KRTAP5-11Q6L8G4 156 aa3.17□□□□□ -1.9
NR1D2-202ENST00000383773 PHGR1C9JFL3 82 aa2.73□□□□□ -1.97
NR1D2-202ENST00000383773 AHNAKQ09666 5890 aaKnown RBP2.71□□□□□ -1.97
NR1D2-202ENST00000383773 MUC16Q8WXI7 14507 aa1.8□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 62.2 ms