RNA–Protein interactions for RNA: ENST00000381984.2

RFX3-203, Transcript of regulatory factor X3, humanhuman

TSL 3 BASIC

Gene RFX3, Length 364 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-203ENST00000381984 HMCN1Q96RW7 5635 aa1.46□□□□□ -2.18
RFX3-203ENST00000381984 PKHD1L1Q86WI1 4243 aa1.46□□□□□ -2.18
RFX3-203ENST00000381984 LRP1Q07954 4544 aaKnown RBP1.45□□□□□ -2.18
RFX3-203ENST00000381984 KRTAP10-10P60014 251 aa1.44□□□□□ -2.18
RFX3-203ENST00000381984 KRTAP21-2Q3LI59 83 aa1.44□□□□□ -2.18
RFX3-203ENST00000381984 RNF213Q63HN8 5207 aa1.44□□□□□ -2.18
RFX3-203ENST00000381984 FAT1Q14517 4588 aa1.43□□□□□ -2.18
RFX3-203ENST00000381984 VPS13BQ7Z7G8 4022 aa1.42□□□□□ -2.18
RFX3-203ENST00000381984 SMR3BP02814 79 aaPredicted RBP1.41□□□□□ -2.18
RFX3-203ENST00000381984 TNXBP22105 4242 aa1.41□□□□□ -2.18
RFX3-203ENST00000381984 FLGP20930 4061 aaPredicted RBP1.4□□□□□ -2.19
RFX3-203ENST00000381984 FAT4Q6V0I7 4981 aa1.39□□□□□ -2.19
RFX3-203ENST00000381984 FAT3Q8TDW7 4589 aa1.39□□□□□ -2.19
RFX3-203ENST00000381984 KRTAP10-4P60372 401 aaPredicted RBP1.38□□□□□ -2.19
RFX3-203ENST00000381984 CRCT1Q9UGL9 99 aa1.38□□□□□ -2.19
RFX3-203ENST00000381984 LRP2P98164 4655 aa1.37□□□□□ -2.19
RFX3-203ENST00000381984 MT1HL1P0DM35 61 aa1.36□□□□□ -2.19
RFX3-203ENST00000381984 GPR98Q8WXG9 6306 aa1.35□□□□□ -2.19
RFX3-203ENST00000381984 KRTAP8-1Q8IUC2 63 aa1.34□□□□□ -2.19
RFX3-203ENST00000381984 FSIP2Q5CZC0 6907 aa1.31□□□□□ -2.2
RFX3-203ENST00000381984 KRTAP2-3P0C7H8 128 aa1.29□□□□□ -2.2
RFX3-203ENST00000381984 KRTAP2-4Q9BYR9 128 aa1.29□□□□□ -2.2
RFX3-203ENST00000381984 KRTAP2-1Q9BYU5 128 aa1.29□□□□□ -2.2
RFX3-203ENST00000381984 LPAP08519 4548 aa1.29□□□□□ -2.2
RFX3-203ENST00000381984 KRTAP12-3P60328 96 aa1.28□□□□□ -2.2
RFX3-203ENST00000381984 KRTAP19-2Q3LHN2 52 aa1.25□□□□□ -2.21
RFX3-203ENST00000381984 SPRR2GQ9BYE4 73 aa1.22□□□□□ -2.21
RFX3-203ENST00000381984 MUC17Q685J3 4493 aa1.22□□□□□ -2.21
RFX3-203ENST00000381984 NEBP20929 6669 aa1.21□□□□□ -2.21
RFX3-203ENST00000381984 SSPOA2VEC9 5147 aa1.21□□□□□ -2.22
RFX3-203ENST00000381984 M0R2T5 61 aa1.21□□□□□ -2.22
RFX3-203ENST00000381984 KRTAP4-1Q9BYQ7 146 aa1.21□□□□□ -2.22
RFX3-203ENST00000381984 MACF1Q9UPN3 7388 aaKnown RBP1.2□□□□□ -2.22
RFX3-203ENST00000381984 SYNE2Q8WXH0 6885 aaKnown RBP1.19□□□□□ -2.22
RFX3-203ENST00000381984 KRTAP6-3Q3LI67 103 aa1.19□□□□□ -2.22
RFX3-203ENST00000381984 KRTAP19-5Q3LI72 72 aa1.17□□□□□ -2.22
RFX3-203ENST00000381984 MT1HP80294 61 aa1.16□□□□□ -2.22
RFX3-203ENST00000381984 USH2AO75445 5202 aa1.16□□□□□ -2.22
RFX3-203ENST00000381984 FCGBPQ9Y6R7 5405 aaPredicted RBP1.16□□□□□ -2.22
RFX3-203ENST00000381984 KRTAP12-4P60329 112 aa1.15□□□□□ -2.23
RFX3-203ENST00000381984 KRTAP19-8Q3LI54 63 aa1.15□□□□□ -2.23
RFX3-203ENST00000381984 AHNAK2Q8IVF2 5795 aa1.14□□□□□ -2.23
RFX3-203ENST00000381984 MT1XP80297 61 aa1.14□□□□□ -2.23
RFX3-203ENST00000381984 KRTAP20-1Q3LI63 56 aa1.14□□□□□ -2.23
RFX3-203ENST00000381984 MUC12Q9UKN1 5478 aa1.1□□□□□ -2.23
RFX3-203ENST00000381984 MT1BP07438 61 aa1.09□□□□□ -2.23
RFX3-203ENST00000381984 AHNAKQ09666 5890 aaKnown RBP1.09□□□□□ -2.24
RFX3-203ENST00000381984 KRTAP19-6Q3LI70 58 aa1.07□□□□□ -2.24
RFX3-203ENST00000381984 PRM1P04553 51 aa1.06□□□□□ -2.24
RFX3-203ENST00000381984 KMT2DO14686 5537 aa1.05□□□□□ -2.24
RFX3-203ENST00000381984 MT2AP02795 61 aa1.05□□□□□ -2.24
RFX3-203ENST00000381984 MUC5BQ9HC84 5762 aaPredicted RBP1.04□□□□□ -2.24
RFX3-203ENST00000381984 MT1FP04733 61 aa1.04□□□□□ -2.24
RFX3-203ENST00000381984 MT1AP04731 61 aa1.03□□□□□ -2.24
RFX3-203ENST00000381984 MT1EP04732 61 aa1.03□□□□□ -2.24
RFX3-203ENST00000381984 KRTAP19-7Q3SYF9 63 aa1.01□□□□□ -2.25
RFX3-203ENST00000381984 MT1LQ93083 61 aa1.01□□□□□ -2.25
RFX3-203ENST00000381984 DSTQ03001 7570 aaKnown RBP0.99□□□□□ -2.25
RFX3-203ENST00000381984 MDN1Q9NU22 5596 aa0.99□□□□□ -2.25
RFX3-203ENST00000381984 KRTAP6-2Q3LI66 62 aa0.95□□□□□ -2.26
RFX3-203ENST00000381984 KRTAP5-10Q6L8G5 202 aa0.95□□□□□ -2.26
RFX3-203ENST00000381984 MT1GP13640 62 aa0.93□□□□□ -2.26
RFX3-203ENST00000381984 SPRR2EP22531 72 aa0.92□□□□□ -2.26
RFX3-203ENST00000381984 SPRR2BP35325 72 aa0.92□□□□□ -2.26
RFX3-203ENST00000381984 SPRR2AP35326 72 aa0.92□□□□□ -2.26
RFX3-203ENST00000381984 SPRR2FQ96RM1 72 aa0.92□□□□□ -2.26
RFX3-203ENST00000381984 SYNE1Q8NF91 8797 aaKnown RBP0.92□□□□□ -2.26
RFX3-203ENST00000381984 MUC5ACP98088 5654 aa0.91□□□□□ -2.26
RFX3-203ENST00000381984 SPRR2DP22532 72 aa0.9□□□□□ -2.27
RFX3-203ENST00000381984 MT1MQ8N339 61 aa0.89□□□□□ -2.27
RFX3-203ENST00000381984 KRTAP6-1Q3LI64 71 aa0.85□□□□□ -2.27
RFX3-203ENST00000381984 KRTAP19-3Q7Z4W3 81 aa0.84□□□□□ -2.27
RFX3-203ENST00000381984 MT4P47944 62 aa0.8□□□□□ -2.28
RFX3-203ENST00000381984 KRTAP21-1Q3LI58 79 aa0.74□□□□□ -2.29
RFX3-203ENST00000381984 KRTAP20-2Q3LI61 65 aa0.73□□□□□ -2.29
RFX3-203ENST00000381984 MUC16Q8WXI7 14507 aa0.58□□□□□ -2.32
RFX3-203ENST00000381984 PHGR1C9JFL3 82 aa0.56□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 84.7 ms