RNA–Protein interactions for RNA: ENST00000381736.7

NUP58-202, Transcript of nucleoporin 58, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUP58, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-202ENST00000381736 KRTAP9-6A0A140TA67 174 aa3.95□□□□□ -1.78
NUP58-202ENST00000381736 MT1EP04732 61 aa3.94□□□□□ -1.78
NUP58-202ENST00000381736 MT1GP13640 62 aa3.91□□□□□ -1.78
NUP58-202ENST00000381736 KMT2DO14686 5537 aa3.9□□□□□ -1.78
NUP58-202ENST00000381736 KRTAP19-7Q3SYF9 63 aa3.89□□□□□ -1.79
NUP58-202ENST00000381736 MT1LQ93083 61 aa3.89□□□□□ -1.79
NUP58-202ENST00000381736 FCGBPQ9Y6R7 5405 aaPredicted RBP3.89□□□□□ -1.79
NUP58-202ENST00000381736 KRTAP19-3Q7Z4W3 81 aa3.88□□□□□ -1.79
NUP58-202ENST00000381736 KRTAP4-7Q9BYR0 210 aa3.85□□□□□ -1.79
NUP58-202ENST00000381736 SPRR2DP22532 72 aa3.81□□□□□ -1.8
NUP58-202ENST00000381736 MACF1Q9UPN3 7388 aaKnown RBP3.77□□□□□ -1.81
NUP58-202ENST00000381736 SYNE2Q8WXH0 6885 aaKnown RBP3.76□□□□□ -1.81
NUP58-202ENST00000381736 MT1MQ8N339 61 aa3.76□□□□□ -1.81
NUP58-202ENST00000381736 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.74□□□□□ -1.81
NUP58-202ENST00000381736 DSTQ03001 7570 aaKnown RBP3.71□□□□□ -1.82
NUP58-202ENST00000381736 KRTAP4-3Q9BYR4 195 aa3.7□□□□□ -1.82
NUP58-202ENST00000381736 MUC12Q9UKN1 5478 aa3.69□□□□□ -1.82
NUP58-202ENST00000381736 KRTAP6-3Q3LI67 103 aa3.68□□□□□ -1.82
NUP58-202ENST00000381736 KRTAP9-7A8MTY7 169 aa3.67□□□□□ -1.82
NUP58-202ENST00000381736 KRTAP12-4P60329 112 aa3.67□□□□□ -1.82
NUP58-202ENST00000381736 LOC100996750A0A140TA64 210 aa3.61□□□□□ -1.83
NUP58-202ENST00000381736 LCE1AQ5T7P2 110 aa3.61□□□□□ -1.83
NUP58-202ENST00000381736 LCE5AQ5TCM9 118 aa3.6□□□□□ -1.83
NUP58-202ENST00000381736 LCE3BQ5TA77 95 aa3.55□□□□□ -1.84
NUP58-202ENST00000381736 KRTAP5-9P26371 169 aa3.53□□□□□ -1.85
NUP58-202ENST00000381736 KRTAP9-6A8MVA2 160 aa3.5□□□□□ -1.85
NUP58-202ENST00000381736 MDN1Q9NU22 5596 aa3.44□□□□□ -1.86
NUP58-202ENST00000381736 LCE3DQ9BYE3 92 aa3.39□□□□□ -1.87
NUP58-202ENST00000381736 MT4P47944 62 aa3.38□□□□□ -1.87
NUP58-202ENST00000381736 MT1AP04731 61 aa3.36□□□□□ -1.87
NUP58-202ENST00000381736 KRTAP20-1Q3LI63 56 aa3.36□□□□□ -1.87
NUP58-202ENST00000381736 LCE3EQ5T5B0 92 aa3.36□□□□□ -1.87
NUP58-202ENST00000381736 KRTAP2-3P0C7H8 128 aa3.35□□□□□ -1.87
NUP58-202ENST00000381736 KRTAP2-4Q9BYR9 128 aa3.35□□□□□ -1.87
NUP58-202ENST00000381736 KRTAP2-1Q9BYU5 128 aa3.29□□□□□ -1.88
NUP58-202ENST00000381736 NEBP20929 6669 aa3.29□□□□□ -1.88
NUP58-202ENST00000381736 KRTAP6-1Q3LI64 71 aa3.29□□□□□ -1.88
NUP58-202ENST00000381736 KRTAP2-2Q9BYT5 123 aa3.28□□□□□ -1.89
NUP58-202ENST00000381736 KRTAP4-6Q9BYQ5 205 aa3.27□□□□□ -1.89
NUP58-202ENST00000381736 MT3P25713 68 aa3.25□□□□□ -1.89
NUP58-202ENST00000381736 PRM1P04553 51 aa3.21□□□□□ -1.9
NUP58-202ENST00000381736 KRTAP4-9Q9BYQ8 210 aa3.2□□□□□ -1.9
NUP58-202ENST00000381736 LCE4AQ5TA78 99 aa3.18□□□□□ -1.9
NUP58-202ENST00000381736 KRTAP9-4Q9BYQ2 154 aa3.15□□□□□ -1.91
NUP58-202ENST00000381736 KRTAP6-2Q3LI66 62 aa3.12□□□□□ -1.91
NUP58-202ENST00000381736 LCE1DQ5T752 114 aa3.01□□□□□ -1.93
NUP58-202ENST00000381736 KRTAP5-5Q701N2 237 aaPredicted RBP3□□□□□ -1.93
NUP58-202ENST00000381736 MUC19Q7Z5P9 8384 aa2.99□□□□□ -1.93
NUP58-202ENST00000381736 LCE1BQ5T7P3 118 aa2.94□□□□□ -1.94
NUP58-202ENST00000381736 KRTAP20-2Q3LI61 65 aa2.93□□□□□ -1.94
NUP58-202ENST00000381736 KRTAP5-4Q6L8H1 288 aa2.87□□□□□ -1.95
NUP58-202ENST00000381736 HMCN1Q96RW7 5635 aa2.77□□□□□ -1.97
NUP58-202ENST00000381736 KRTAP4-12Q9BQ66 201 aa2.74□□□□□ -1.97
NUP58-202ENST00000381736 KRTAP9-9Q9BYP9 154 aa2.71□□□□□ -1.98
NUP58-202ENST00000381736 GPR98Q8WXG9 6306 aa2.62□□□□□ -1.99
NUP58-202ENST00000381736 KRTAP4-11Q9BYQ6 195 aa2.6□□□□□ -1.99
NUP58-202ENST00000381736 KRTAP5-3Q6L8H2 238 aa2.57□□□□□ -2
NUP58-202ENST00000381736 KRTAP5-2Q701N4 177 aa2.56□□□□□ -2
NUP58-202ENST00000381736 KRTAP4-2Q9BYR5 136 aa2.54□□□□□ -2
NUP58-202ENST00000381736 MUC5ACP98088 5654 aa2.52□□□□□ -2.01
NUP58-202ENST00000381736 LCE1EQ5T753 118 aa2.51□□□□□ -2.01
NUP58-202ENST00000381736 AHNAK2Q8IVF2 5795 aa2.42□□□□□ -2.02
NUP58-202ENST00000381736 LCE1CQ5T751 118 aa2.38□□□□□ -2.03
NUP58-202ENST00000381736 LCE1FQ5T754 118 aa2.38□□□□□ -2.03
NUP58-202ENST00000381736 KRTAP5-8O75690 187 aa2.32□□□□□ -2.04
NUP58-202ENST00000381736 KRTAP5-1Q6L8H4 278 aa2.26□□□□□ -2.05
NUP58-202ENST00000381736 KRTAP4-4Q9BYR3 166 aa2.24□□□□□ -2.05
NUP58-202ENST00000381736 KRTAP5-10Q6L8G5 202 aa2.21□□□□□ -2.06
NUP58-202ENST00000381736 MUC5BQ9HC84 5762 aaPredicted RBP2.09□□□□□ -2.07
NUP58-202ENST00000381736 KRTAP5-7Q6L8G8 165 aa2.04□□□□□ -2.08
NUP58-202ENST00000381736 KRTAP5-11Q6L8G4 156 aa2.01□□□□□ -2.09
NUP58-202ENST00000381736 AHNAKQ09666 5890 aaKnown RBP1.99□□□□□ -2.09
NUP58-202ENST00000381736 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.98□□□□□ -2.09
NUP58-202ENST00000381736 KRTAP21-2Q3LI59 83 aa1.97□□□□□ -2.09
NUP58-202ENST00000381736 PHGR1C9JFL3 82 aa1.71□□□□□ -2.14
NUP58-202ENST00000381736 KRTAP21-1Q3LI58 79 aa1.53□□□□□ -2.16
NUP58-202ENST00000381736 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 188.1 ms