RNA–Protein interactions for RNA: ENST00000381578.6

SHOX-203, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHOX, Length 3,757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-203ENST00000381578 DSTQ03001 7570 aaKnown RBP4.18□□□□□ -1.74
SHOX-203ENST00000381578 KRTAP9-4Q9BYQ2 154 aa4.16□□□□□ -1.74
SHOX-203ENST00000381578 KRTAP12-4P60329 112 aa4.14□□□□□ -1.75
SHOX-203ENST00000381578 FCGBPQ9Y6R7 5405 aaPredicted RBP4.1□□□□□ -1.75
SHOX-203ENST00000381578 SPRR2FQ96RM1 72 aa4.1□□□□□ -1.75
SHOX-203ENST00000381578 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.09□□□□□ -1.76
SHOX-203ENST00000381578 KRTAP19-6Q3LI70 58 aa4.08□□□□□ -1.76
SHOX-203ENST00000381578 MT1GP13640 62 aa4.07□□□□□ -1.76
SHOX-203ENST00000381578 LOC100996750A0A140TA64 210 aa4.06□□□□□ -1.76
SHOX-203ENST00000381578 SSPOA2VEC9 5147 aa4.04□□□□□ -1.76
SHOX-203ENST00000381578 KRTAP2-3P0C7H8 128 aa4.03□□□□□ -1.76
SHOX-203ENST00000381578 KRTAP2-4Q9BYR9 128 aa4.03□□□□□ -1.76
SHOX-203ENST00000381578 KRTAP2-1Q9BYU5 128 aa4.03□□□□□ -1.76
SHOX-203ENST00000381578 SYNE2Q8WXH0 6885 aaKnown RBP4.01□□□□□ -1.77
SHOX-203ENST00000381578 KRTAP4-3Q9BYR4 195 aa4.01□□□□□ -1.77
SHOX-203ENST00000381578 KRTAP19-7Q3SYF9 63 aa4□□□□□ -1.77
SHOX-203ENST00000381578 MT1LQ93083 61 aa3.99□□□□□ -1.77
SHOX-203ENST00000381578 LCE5AQ5TCM9 118 aa3.98□□□□□ -1.77
SHOX-203ENST00000381578 LCE3BQ5TA77 95 aa3.98□□□□□ -1.77
SHOX-203ENST00000381578 KRTAP9-9Q9BYP9 154 aa3.94□□□□□ -1.78
SHOX-203ENST00000381578 MT1EP04732 61 aa3.92□□□□□ -1.78
SHOX-203ENST00000381578 SPRR2EP22531 72 aa3.89□□□□□ -1.79
SHOX-203ENST00000381578 SPRR2BP35325 72 aa3.89□□□□□ -1.79
SHOX-203ENST00000381578 SPRR2AP35326 72 aa3.89□□□□□ -1.79
SHOX-203ENST00000381578 KRTAP4-9Q9BYQ8 210 aa3.87□□□□□ -1.79
SHOX-203ENST00000381578 KRTAP20-1Q3LI63 56 aa3.84□□□□□ -1.79
SHOX-203ENST00000381578 MUC12Q9UKN1 5478 aa3.83□□□□□ -1.8
SHOX-203ENST00000381578 KRTAP6-3Q3LI67 103 aa3.81□□□□□ -1.8
SHOX-203ENST00000381578 MACF1Q9UPN3 7388 aaKnown RBP3.76□□□□□ -1.81
SHOX-203ENST00000381578 SPRR2DP22532 72 aa3.76□□□□□ -1.81
SHOX-203ENST00000381578 MT3P25713 68 aa3.75□□□□□ -1.81
SHOX-203ENST00000381578 KRTAP19-3Q7Z4W3 81 aa3.75□□□□□ -1.81
SHOX-203ENST00000381578 KRTAP4-12Q9BQ66 201 aa3.7□□□□□ -1.82
SHOX-203ENST00000381578 MT1MQ8N339 61 aa3.69□□□□□ -1.82
SHOX-203ENST00000381578 PRM1P04553 51 aa3.69□□□□□ -1.82
SHOX-203ENST00000381578 LCE3DQ9BYE3 92 aa3.69□□□□□ -1.82
SHOX-203ENST00000381578 NEBP20929 6669 aa3.66□□□□□ -1.82
SHOX-203ENST00000381578 LCE3EQ5T5B0 92 aa3.63□□□□□ -1.83
SHOX-203ENST00000381578 KRTAP4-6Q9BYQ5 205 aa3.61□□□□□ -1.83
SHOX-203ENST00000381578 LCE1FQ5T754 118 aa3.53□□□□□ -1.84
SHOX-203ENST00000381578 KRTAP2-2Q9BYT5 123 aa3.52□□□□□ -1.85
SHOX-203ENST00000381578 LCE1AQ5T7P2 110 aa3.51□□□□□ -1.85
SHOX-203ENST00000381578 MDN1Q9NU22 5596 aa3.47□□□□□ -1.85
SHOX-203ENST00000381578 KRTAP5-9P26371 169 aa3.47□□□□□ -1.85
SHOX-203ENST00000381578 KRTAP6-1Q3LI64 71 aa3.47□□□□□ -1.85
SHOX-203ENST00000381578 GPR98Q8WXG9 6306 aa3.44□□□□□ -1.86
SHOX-203ENST00000381578 LCE1DQ5T752 114 aa3.41□□□□□ -1.86
SHOX-203ENST00000381578 KRTAP6-2Q3LI66 62 aa3.37□□□□□ -1.87
SHOX-203ENST00000381578 MT4P47944 62 aa3.36□□□□□ -1.87
SHOX-203ENST00000381578 MT1AP04731 61 aa3.32□□□□□ -1.88
SHOX-203ENST00000381578 KRTAP5-5Q701N2 237 aaPredicted RBP3.27□□□□□ -1.89
SHOX-203ENST00000381578 LCE1EQ5T753 118 aa3.19□□□□□ -1.9
SHOX-203ENST00000381578 KRTAP4-11Q9BYQ6 195 aa3.16□□□□□ -1.9
SHOX-203ENST00000381578 MUC19Q7Z5P9 8384 aa3.1□□□□□ -1.91
SHOX-203ENST00000381578 LCE1BQ5T7P3 118 aa3.07□□□□□ -1.92
SHOX-203ENST00000381578 KRTAP5-4Q6L8H1 288 aa2.9□□□□□ -1.95
SHOX-203ENST00000381578 KRTAP4-2Q9BYR5 136 aa2.88□□□□□ -1.95
SHOX-203ENST00000381578 KRTAP20-2Q3LI61 65 aa2.84□□□□□ -1.96
SHOX-203ENST00000381578 HMCN1Q96RW7 5635 aa2.75□□□□□ -1.97
SHOX-203ENST00000381578 KRTAP5-3Q6L8H2 238 aa2.73□□□□□ -1.97
SHOX-203ENST00000381578 MUC5ACP98088 5654 aa2.69□□□□□ -1.98
SHOX-203ENST00000381578 AHNAK2Q8IVF2 5795 aa2.66□□□□□ -1.98
SHOX-203ENST00000381578 KRTAP5-2Q701N4 177 aa2.64□□□□□ -1.99
SHOX-203ENST00000381578 KRTAP5-10Q6L8G5 202 aa2.49□□□□□ -2.01
SHOX-203ENST00000381578 AHNAKQ09666 5890 aaKnown RBP2.45□□□□□ -2.02
SHOX-203ENST00000381578 KRTAP5-7Q6L8G8 165 aa2.44□□□□□ -2.02
SHOX-203ENST00000381578 KRTAP4-4Q9BYR3 166 aa2.42□□□□□ -2.02
SHOX-203ENST00000381578 KRTAP5-8O75690 187 aa2.38□□□□□ -2.03
SHOX-203ENST00000381578 LCE1CQ5T751 118 aa2.37□□□□□ -2.03
SHOX-203ENST00000381578 KRTAP5-1Q6L8H4 278 aa2.3□□□□□ -2.04
SHOX-203ENST00000381578 MUC5BQ9HC84 5762 aaPredicted RBP2.25□□□□□ -2.05
SHOX-203ENST00000381578 KRTAP5-11Q6L8G4 156 aa2.13□□□□□ -2.07
SHOX-203ENST00000381578 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.05□□□□□ -2.08
SHOX-203ENST00000381578 KRTAP21-2Q3LI59 83 aa2.04□□□□□ -2.08
SHOX-203ENST00000381578 KRTAP21-1Q3LI58 79 aa1.99□□□□□ -2.09
SHOX-203ENST00000381578 PHGR1C9JFL3 82 aa1.93□□□□□ -2.1
SHOX-203ENST00000381578 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 33.3 ms