RNA–Protein interactions for RNA: ENST00000380874.3

FOXC1-201, Transcript of forkhead box C1, humanhuman

APPRIS P1 BASIC

Gene FOXC1, Length 3,926 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1-201ENST00000380874 SSPOA2VEC9 5147 aa6.65□□□□□ -1.35
FOXC1-201ENST00000380874 KRTAP4-3Q9BYR4 195 aa6.55□□□□□ -1.36
FOXC1-201ENST00000380874 KRTAP19-6Q3LI70 58 aa6.54□□□□□ -1.36
FOXC1-201ENST00000380874 MT1GP13640 62 aa6.54□□□□□ -1.36
FOXC1-201ENST00000380874 LOC100996750A0A140TA64 210 aa6.49□□□□□ -1.37
FOXC1-201ENST00000380874 SYNE2Q8WXH0 6885 aaKnown RBP6.48□□□□□ -1.37
FOXC1-201ENST00000380874 MUC12Q9UKN1 5478 aa6.46□□□□□ -1.37
FOXC1-201ENST00000380874 KRTAP19-4Q3LI73 84 aa6.45□□□□□ -1.38
FOXC1-201ENST00000380874 FCGBPQ9Y6R7 5405 aaPredicted RBP6.43□□□□□ -1.38
FOXC1-201ENST00000380874 KRTAP9-6A0A140TA67 174 aa6.43□□□□□ -1.38
FOXC1-201ENST00000380874 LCE2DQ5TA82 110 aaPredicted RBP6.39□□□□□ -1.39
FOXC1-201ENST00000380874 SPRR2EP22531 72 aa6.37□□□□□ -1.39
FOXC1-201ENST00000380874 SPRR2BP35325 72 aa6.37□□□□□ -1.39
FOXC1-201ENST00000380874 SPRR2AP35326 72 aa6.37□□□□□ -1.39
FOXC1-201ENST00000380874 MACF1Q9UPN3 7388 aaKnown RBP6.37□□□□□ -1.39
FOXC1-201ENST00000380874 KRTAP19-3Q7Z4W3 81 aa6.35□□□□□ -1.39
FOXC1-201ENST00000380874 KRTAP2-3P0C7H8 128 aa6.33□□□□□ -1.4
FOXC1-201ENST00000380874 KRTAP2-4Q9BYR9 128 aa6.33□□□□□ -1.4
FOXC1-201ENST00000380874 KRTAP2-1Q9BYU5 128 aa6.33□□□□□ -1.4
FOXC1-201ENST00000380874 MT1MQ8N339 61 aa6.31□□□□□ -1.4
FOXC1-201ENST00000380874 LCE3BQ5TA77 95 aa6.15□□□□□ -1.43
FOXC1-201ENST00000380874 SPRR2DP22532 72 aa6.1□□□□□ -1.43
FOXC1-201ENST00000380874 KRTAP12-4P60329 112 aa6.05□□□□□ -1.44
FOXC1-201ENST00000380874 KRTAP9-7A8MTY7 169 aa6.03□□□□□ -1.44
FOXC1-201ENST00000380874 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.02□□□□□ -1.45
FOXC1-201ENST00000380874 LCE5AQ5TCM9 118 aa5.97□□□□□ -1.45
FOXC1-201ENST00000380874 KRTAP4-9Q9BYQ8 210 aa5.91□□□□□ -1.46
FOXC1-201ENST00000380874 MDN1Q9NU22 5596 aa5.82□□□□□ -1.48
FOXC1-201ENST00000380874 KRTAP6-1Q3LI64 71 aa5.75□□□□□ -1.49
FOXC1-201ENST00000380874 LCE1AQ5T7P2 110 aa5.68□□□□□ -1.5
FOXC1-201ENST00000380874 LCE3DQ9BYE3 92 aa5.67□□□□□ -1.5
FOXC1-201ENST00000380874 MT4P47944 62 aa5.66□□□□□ -1.5
FOXC1-201ENST00000380874 KRTAP6-3Q3LI67 103 aa5.65□□□□□ -1.51
FOXC1-201ENST00000380874 MT1AP04731 61 aa5.63□□□□□ -1.51
FOXC1-201ENST00000380874 LCE3EQ5T5B0 92 aa5.56□□□□□ -1.52
FOXC1-201ENST00000380874 KRTAP5-9P26371 169 aa5.42□□□□□ -1.54
FOXC1-201ENST00000380874 KRTAP20-1Q3LI63 56 aa5.41□□□□□ -1.54
FOXC1-201ENST00000380874 NEBP20929 6669 aa5.34□□□□□ -1.55
FOXC1-201ENST00000380874 PRM1P04553 51 aa5.33□□□□□ -1.56
FOXC1-201ENST00000380874 KRTAP9-4Q9BYQ2 154 aa5.29□□□□□ -1.56
FOXC1-201ENST00000380874 KRTAP6-2Q3LI66 62 aa5.27□□□□□ -1.57
FOXC1-201ENST00000380874 MT3P25713 68 aa5.23□□□□□ -1.57
FOXC1-201ENST00000380874 KRTAP5-5Q701N2 237 aaPredicted RBP5.22□□□□□ -1.57
FOXC1-201ENST00000380874 KRTAP2-2Q9BYT5 123 aa5.16□□□□□ -1.58
FOXC1-201ENST00000380874 MUC19Q7Z5P9 8384 aa5.14□□□□□ -1.59
FOXC1-201ENST00000380874 KRTAP4-6Q9BYQ5 205 aa4.93□□□□□ -1.62
FOXC1-201ENST00000380874 LCE1DQ5T752 114 aa4.9□□□□□ -1.63
FOXC1-201ENST00000380874 LCE1BQ5T7P3 118 aa4.83□□□□□ -1.64
FOXC1-201ENST00000380874 LCE4AQ5TA78 99 aa4.77□□□□□ -1.65
FOXC1-201ENST00000380874 GPR98Q8WXG9 6306 aa4.74□□□□□ -1.65
FOXC1-201ENST00000380874 KRTAP20-2Q3LI61 65 aa4.6□□□□□ -1.67
FOXC1-201ENST00000380874 KRTAP5-4Q6L8H1 288 aa4.6□□□□□ -1.67
FOXC1-201ENST00000380874 HMCN1Q96RW7 5635 aa4.54□□□□□ -1.68
FOXC1-201ENST00000380874 LCE1EQ5T753 118 aa4.47□□□□□ -1.69
FOXC1-201ENST00000380874 MUC5ACP98088 5654 aa4.45□□□□□ -1.7
FOXC1-201ENST00000380874 KRTAP5-2Q701N4 177 aa4.26□□□□□ -1.73
FOXC1-201ENST00000380874 KRTAP5-3Q6L8H2 238 aa4.15□□□□□ -1.74
FOXC1-201ENST00000380874 KRTAP4-11Q9BYQ6 195 aa4.12□□□□□ -1.75
FOXC1-201ENST00000380874 AHNAK2Q8IVF2 5795 aa4.04□□□□□ -1.76
FOXC1-201ENST00000380874 KRTAP9-9Q9BYP9 154 aa4□□□□□ -1.77
FOXC1-201ENST00000380874 KRTAP4-12Q9BQ66 201 aa3.9□□□□□ -1.78
FOXC1-201ENST00000380874 KRTAP4-2Q9BYR5 136 aa3.9□□□□□ -1.78
FOXC1-201ENST00000380874 KRTAP5-10Q6L8G5 202 aa3.86□□□□□ -1.79
FOXC1-201ENST00000380874 LCE1CQ5T751 118 aa3.84□□□□□ -1.79
FOXC1-201ENST00000380874 LCE1FQ5T754 118 aa3.84□□□□□ -1.79
FOXC1-201ENST00000380874 MUC5BQ9HC84 5762 aaPredicted RBP3.77□□□□□ -1.81
FOXC1-201ENST00000380874 KRTAP5-8O75690 187 aa3.76□□□□□ -1.81
FOXC1-201ENST00000380874 KRTAP4-4Q9BYR3 166 aa3.73□□□□□ -1.81
FOXC1-201ENST00000380874 KRTAP5-1Q6L8H4 278 aa3.72□□□□□ -1.81
FOXC1-201ENST00000380874 KRTAP21-2Q3LI59 83 aa3.53□□□□□ -1.84
FOXC1-201ENST00000380874 AHNAKQ09666 5890 aaKnown RBP3.38□□□□□ -1.87
FOXC1-201ENST00000380874 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.35□□□□□ -1.87
FOXC1-201ENST00000380874 KRTAP5-11Q6L8G4 156 aa3.22□□□□□ -1.89
FOXC1-201ENST00000380874 KRTAP5-7Q6L8G8 165 aa3.19□□□□□ -1.9
FOXC1-201ENST00000380874 KRTAP21-1Q3LI58 79 aa2.99□□□□□ -1.93
FOXC1-201ENST00000380874 PHGR1C9JFL3 82 aa2.79□□□□□ -1.96
FOXC1-201ENST00000380874 MUC16Q8WXI7 14507 aa1.83□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 12.3 ms