RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 MT1LQ93083 61 aa4.42□□□□□ -1.7
VPS16-202ENST00000380445 MACF1Q9UPN3 7388 aaKnown RBP4.4□□□□□ -1.71
VPS16-202ENST00000380445 KRTAP4-7Q9BYR0 210 aa4.33□□□□□ -1.72
VPS16-202ENST00000380445 KRTAP9-6A8MVA2 160 aa4.32□□□□□ -1.72
VPS16-202ENST00000380445 SYNE2Q8WXH0 6885 aaKnown RBP4.31□□□□□ -1.72
VPS16-202ENST00000380445 KRTAP9-7A8MTY7 169 aa4.3□□□□□ -1.72
VPS16-202ENST00000380445 MT1GP13640 62 aa4.24□□□□□ -1.73
VPS16-202ENST00000380445 KRTAP6-3Q3LI67 103 aa4.24□□□□□ -1.73
VPS16-202ENST00000380445 KRTAP19-3Q7Z4W3 81 aa4.24□□□□□ -1.73
VPS16-202ENST00000380445 MT1MQ8N339 61 aa4.18□□□□□ -1.74
VPS16-202ENST00000380445 KRTAP5-9P26371 169 aa4.17□□□□□ -1.74
VPS16-202ENST00000380445 SPRR2FQ96RM1 72 aa4.16□□□□□ -1.74
VPS16-202ENST00000380445 KRTAP2-3P0C7H8 128 aa4.16□□□□□ -1.74
VPS16-202ENST00000380445 KRTAP2-4Q9BYR9 128 aa4.16□□□□□ -1.74
VPS16-202ENST00000380445 KRTAP2-1Q9BYU5 128 aa4.16□□□□□ -1.74
VPS16-202ENST00000380445 MUC12Q9UKN1 5478 aa4.13□□□□□ -1.75
VPS16-202ENST00000380445 LCE5AQ5TCM9 118 aa4.11□□□□□ -1.75
VPS16-202ENST00000380445 KRTAP4-3Q9BYR4 195 aa4.11□□□□□ -1.75
VPS16-202ENST00000380445 MDN1Q9NU22 5596 aa4.07□□□□□ -1.76
VPS16-202ENST00000380445 LOC100996750A0A140TA64 210 aa4.05□□□□□ -1.76
VPS16-202ENST00000380445 NEBP20929 6669 aa3.99□□□□□ -1.77
VPS16-202ENST00000380445 SPRR2EP22531 72 aa3.98□□□□□ -1.77
VPS16-202ENST00000380445 SPRR2BP35325 72 aa3.98□□□□□ -1.77
VPS16-202ENST00000380445 SPRR2AP35326 72 aa3.98□□□□□ -1.77
VPS16-202ENST00000380445 LCE1AQ5T7P2 110 aa3.98□□□□□ -1.77
VPS16-202ENST00000380445 DSTQ03001 7570 aaKnown RBP3.87□□□□□ -1.79
VPS16-202ENST00000380445 SPRR2DP22532 72 aa3.85□□□□□ -1.79
VPS16-202ENST00000380445 KRTAP12-4P60329 112 aa3.83□□□□□ -1.8
VPS16-202ENST00000380445 KRTAP20-1Q3LI63 56 aa3.8□□□□□ -1.8
VPS16-202ENST00000380445 MT1AP04731 61 aa3.75□□□□□ -1.81
VPS16-202ENST00000380445 KRTAP6-1Q3LI64 71 aa3.73□□□□□ -1.81
VPS16-202ENST00000380445 KRTAP5-5Q701N2 237 aaPredicted RBP3.73□□□□□ -1.81
VPS16-202ENST00000380445 LCE3BQ5TA77 95 aa3.72□□□□□ -1.81
VPS16-202ENST00000380445 KRTAP2-2Q9BYT5 123 aa3.66□□□□□ -1.82
VPS16-202ENST00000380445 KRTAP9-4Q9BYQ2 154 aa3.55□□□□□ -1.84
VPS16-202ENST00000380445 KRTAP4-9Q9BYQ8 210 aa3.55□□□□□ -1.84
VPS16-202ENST00000380445 SYNE1Q8NF91 8797 aaKnown RBP3.53□□□□□ -1.84
VPS16-202ENST00000380445 LCE3DQ9BYE3 92 aa3.51□□□□□ -1.85
VPS16-202ENST00000380445 PRM1P04553 51 aa3.46□□□□□ -1.86
VPS16-202ENST00000380445 LCE3EQ5T5B0 92 aa3.45□□□□□ -1.86
VPS16-202ENST00000380445 KRTAP5-4Q6L8H1 288 aa3.42□□□□□ -1.86
VPS16-202ENST00000380445 MT3P25713 68 aa3.41□□□□□ -1.86
VPS16-202ENST00000380445 LCE4AQ5TA78 99 aa3.41□□□□□ -1.86
VPS16-202ENST00000380445 LCE1FQ5T754 118 aa3.4□□□□□ -1.87
VPS16-202ENST00000380445 KRTAP6-2Q3LI66 62 aa3.38□□□□□ -1.87
VPS16-202ENST00000380445 MT4P47944 62 aa3.35□□□□□ -1.87
VPS16-202ENST00000380445 LCE1DQ5T752 114 aa3.34□□□□□ -1.87
VPS16-202ENST00000380445 KRTAP9-9Q9BYP9 154 aa3.34□□□□□ -1.87
VPS16-202ENST00000380445 LCE1EQ5T753 118 aa3.33□□□□□ -1.88
VPS16-202ENST00000380445 HMCN1Q96RW7 5635 aa3.32□□□□□ -1.88
VPS16-202ENST00000380445 KRTAP4-6Q9BYQ5 205 aa3.3□□□□□ -1.88
VPS16-202ENST00000380445 KRTAP20-2Q3LI61 65 aa3.21□□□□□ -1.9
VPS16-202ENST00000380445 KRTAP5-2Q701N4 177 aa3.13□□□□□ -1.91
VPS16-202ENST00000380445 OBSCNQ5VST9 7968 aa3.13□□□□□ -1.91
VPS16-202ENST00000380445 KRTAP5-3Q6L8H2 238 aa3.11□□□□□ -1.91
VPS16-202ENST00000380445 AHNAK2Q8IVF2 5795 aa3.08□□□□□ -1.92
VPS16-202ENST00000380445 KRTAP5-10Q6L8G5 202 aa2.99□□□□□ -1.93
VPS16-202ENST00000380445 GPR98Q8WXG9 6306 aa2.99□□□□□ -1.93
VPS16-202ENST00000380445 KRTAP5-7Q6L8G8 165 aa2.86□□□□□ -1.95
VPS16-202ENST00000380445 KRTAP4-11Q9BYQ6 195 aa2.85□□□□□ -1.95
VPS16-202ENST00000380445 KRTAP5-8O75690 187 aa2.75□□□□□ -1.97
VPS16-202ENST00000380445 MUC5ACP98088 5654 aa2.72□□□□□ -1.97
VPS16-202ENST00000380445 LCE1BQ5T7P3 118 aa2.72□□□□□ -1.97
VPS16-202ENST00000380445 LCE1CQ5T751 118 aa2.68□□□□□ -1.98
VPS16-202ENST00000380445 KRTAP5-1Q6L8H4 278 aa2.68□□□□□ -1.98
VPS16-202ENST00000380445 KRTAP4-2Q9BYR5 136 aa2.65□□□□□ -1.99
VPS16-202ENST00000380445 MUC19Q7Z5P9 8384 aa2.62□□□□□ -1.99
VPS16-202ENST00000380445 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.53□□□□□ -2
VPS16-202ENST00000380445 MUC5BQ9HC84 5762 aaPredicted RBP2.5□□□□□ -2.01
VPS16-202ENST00000380445 KRTAP4-12Q9BQ66 201 aa2.49□□□□□ -2.01
VPS16-202ENST00000380445 AHNAKQ09666 5890 aaKnown RBP2.44□□□□□ -2.02
VPS16-202ENST00000380445 KRTAP21-2Q3LI59 83 aa2.42□□□□□ -2.02
VPS16-202ENST00000380445 KRTAP5-11Q6L8G4 156 aa2.33□□□□□ -2.04
VPS16-202ENST00000380445 KRTAP21-1Q3LI58 79 aa2.21□□□□□ -2.06
VPS16-202ENST00000380445 KRTAP4-4Q9BYR3 166 aa2.14□□□□□ -2.07
VPS16-202ENST00000380445 PHGR1C9JFL3 82 aa1.99□□□□□ -2.09
VPS16-202ENST00000380445 MUC16Q8WXI7 14507 aa1.32□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 12.7 ms