RNA–Protein interactions for RNA: ENST00000380038.7

KLC1-205, Transcript of kinesin light chain 1, human

TSL 2 BASIC

Gene KLC1, Length 2,322 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KLC1-205	ENST00000380038	LCE2D	Q5TA82	110 aa	Predicted RBP	7.72	□□□□□ -1.17
KLC1-205	ENST00000380038	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	7.59	□□□□□ -1.19
KLC1-205	ENST00000380038	KRTAP4-3	Q9BYR4	195 aa		7.41	□□□□□ -1.22
KLC1-205	ENST00000380038	LOC100996750	A0A140TA64	210 aa		7.4	□□□□□ -1.23
KLC1-205	ENST00000380038	MT1G	P13640	62 aa		7.32	□□□□□ -1.24
KLC1-205	ENST00000380038	MUC12	Q9UKN1	5478 aa		7.3	□□□□□ -1.24
KLC1-205	ENST00000380038	MT1M	Q8N339	61 aa		7.29	□□□□□ -1.24
KLC1-205	ENST00000380038	KRTAP19-3	Q7Z4W3	81 aa		7.28	□□□□□ -1.24
KLC1-205	ENST00000380038	KRTAP9-2	Q9BYQ4	174 aa		7.27	□□□□□ -1.25
KLC1-205	ENST00000380038	MACF1	Q9UPN3	7388 aa	Known RBP	7.21	□□□□□ -1.26
KLC1-205	ENST00000380038	SPRR2F	Q96RM1	72 aa		7.11	□□□□□ -1.27
KLC1-205	ENST00000380038	CRCT1	Q9UGL9	99 aa		7.11	□□□□□ -1.27
KLC1-205	ENST00000380038	LCE5A	Q5TCM9	118 aa		7.04	□□□□□ -1.28
KLC1-205	ENST00000380038	SYNE2	Q8WXH0	6885 aa	Known RBP	6.99	□□□□□ -1.29
KLC1-205	ENST00000380038	DST	Q03001	7570 aa	Known RBP	6.93	□□□□□ -1.3
KLC1-205	ENST00000380038	KRTAP12-4	P60329	112 aa		6.9	□□□□□ -1.31
KLC1-205	ENST00000380038	MDN1	Q9NU22	5596 aa		6.85	□□□□□ -1.31
KLC1-205	ENST00000380038	KRTAP5-9	P26371	169 aa		6.81	□□□□□ -1.32
KLC1-205	ENST00000380038	LCE3B	Q5TA77	95 aa		6.77	□□□□□ -1.33
KLC1-205	ENST00000380038	LCE1A	Q5T7P2	110 aa		6.72	□□□□□ -1.33
KLC1-205	ENST00000380038	KRTAP4-9	Q9BYQ8	210 aa		6.67	□□□□□ -1.34
KLC1-205	ENST00000380038	KRTAP6-1	Q3LI64	71 aa		6.65	□□□□□ -1.34
KLC1-205	ENST00000380038	MT1A	P04731	61 aa		6.62	□□□□□ -1.35
KLC1-205	ENST00000380038	SPRR2E	P22531	72 aa		6.59	□□□□□ -1.35
KLC1-205	ENST00000380038	SPRR2B	P35325	72 aa		6.59	□□□□□ -1.35
KLC1-205	ENST00000380038	SPRR2A	P35326	72 aa		6.59	□□□□□ -1.35
KLC1-205	ENST00000380038	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	6.53	□□□□□ -1.36
KLC1-205	ENST00000380038	SYNE1	Q8NF91	8797 aa	Known RBP	6.51	□□□□□ -1.37
KLC1-205	ENST00000380038	KRTAP5-5	Q701N2	237 aa	Predicted RBP	6.47	□□□□□ -1.37
KLC1-205	ENST00000380038	KRTAP9-6	A0A140TA67	174 aa		6.45	□□□□□ -1.38
KLC1-205	ENST00000380038	KRTAP6-3	Q3LI67	103 aa		6.44	□□□□□ -1.38
KLC1-205	ENST00000380038	LCE3D	Q9BYE3	92 aa		6.42	□□□□□ -1.38
KLC1-205	ENST00000380038	LCE3E	Q5T5B0	92 aa		6.34	□□□□□ -1.39
KLC1-205	ENST00000380038	SPRR2D	P22532	72 aa		6.32	□□□□□ -1.4
KLC1-205	ENST00000380038	KRTAP9-7	A8MTY7	169 aa		6.2	□□□□□ -1.42
KLC1-205	ENST00000380038	KRTAP9-4	Q9BYQ2	154 aa		6.18	□□□□□ -1.42
KLC1-205	ENST00000380038	PRM1	P04553	51 aa		6.1	□□□□□ -1.43
KLC1-205	ENST00000380038	NEB	P20929	6669 aa		6.01	□□□□□ -1.45
KLC1-205	ENST00000380038	KRTAP6-2	Q3LI66	62 aa		5.94	□□□□□ -1.46
KLC1-205	ENST00000380038	MT3	P25713	68 aa		5.88	□□□□□ -1.47
KLC1-205	ENST00000380038	KRTAP5-4	Q6L8H1	288 aa		5.79	□□□□□ -1.48
KLC1-205	ENST00000380038	OBSCN	Q5VST9	7968 aa		5.75	□□□□□ -1.49
KLC1-205	ENST00000380038	KRTAP4-6	Q9BYQ5	205 aa		5.58	□□□□□ -1.52
KLC1-205	ENST00000380038	MT4	P47944	62 aa		5.56	□□□□□ -1.52
KLC1-205	ENST00000380038	LCE4A	Q5TA78	99 aa		5.52	□□□□□ -1.53
KLC1-205	ENST00000380038	KRTAP2-2	Q9BYT5	123 aa		5.46	□□□□□ -1.54
KLC1-205	ENST00000380038	KRTAP20-2	Q3LI61	65 aa		5.43	□□□□□ -1.54
KLC1-205	ENST00000380038	HMCN1	Q96RW7	5635 aa		5.4	□□□□□ -1.55
KLC1-205	ENST00000380038	LCE1D	Q5T752	114 aa		5.35	□□□□□ -1.55
KLC1-205	ENST00000380038	KRTAP5-2	Q701N4	177 aa		5.32	□□□□□ -1.56
KLC1-205	ENST00000380038	KRTAP20-1	Q3LI63	56 aa		5.31	□□□□□ -1.56
KLC1-205	ENST00000380038	KRTAP5-3	Q6L8H2	238 aa		5.2	□□□□□ -1.58
KLC1-205	ENST00000380038	MUC5AC	P98088	5654 aa		5	□□□□□ -1.61
KLC1-205	ENST00000380038	LCE1E	Q5T753	118 aa		4.8	□□□□□ -1.64
KLC1-205	ENST00000380038	LCE1B	Q5T7P3	118 aa		4.73	□□□□□ -1.65
KLC1-205	ENST00000380038	KRTAP5-10	Q6L8G5	202 aa		4.71	□□□□□ -1.66
KLC1-205	ENST00000380038	KRTAP5-1	Q6L8H4	278 aa		4.65	□□□□□ -1.66
KLC1-205	ENST00000380038	KRTAP4-11	Q9BYQ6	195 aa		4.61	□□□□□ -1.67
KLC1-205	ENST00000380038	KRTAP4-2	Q9BYR5	136 aa		4.57	□□□□□ -1.68
KLC1-205	ENST00000380038	LCE1C	Q5T751	118 aa		4.54	□□□□□ -1.68
KLC1-205	ENST00000380038	AHNAK2	Q8IVF2	5795 aa		4.47	□□□□□ -1.69
KLC1-205	ENST00000380038	KRTAP5-8	O75690	187 aa		4.43	□□□□□ -1.7
KLC1-205	ENST00000380038	GPR98	Q8WXG9	6306 aa		4.34	□□□□□ -1.72
KLC1-205	ENST00000380038	KRTAP21-2	Q3LI59	83 aa		4.3	□□□□□ -1.72
KLC1-205	ENST00000380038	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.3	□□□□□ -1.72
KLC1-205	ENST00000380038	KRTAP5-7	Q6L8G8	165 aa		4.29	□□□□□ -1.72
KLC1-205	ENST00000380038	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.94	□□□□□ -1.78
KLC1-205	ENST00000380038	KRTAP5-11	Q6L8G4	156 aa		3.91	□□□□□ -1.78
KLC1-205	ENST00000380038	KRTAP4-4	Q9BYR3	166 aa		3.91	□□□□□ -1.78
KLC1-205	ENST00000380038	KRTAP21-1	Q3LI58	79 aa		3.87	□□□□□ -1.79
KLC1-205	ENST00000380038	KRTAP9-9	Q9BYP9	154 aa		3.83	□□□□□ -1.8
KLC1-205	ENST00000380038	KRTAP4-12	Q9BQ66	201 aa		3.72	□□□□□ -1.81
KLC1-205	ENST00000380038	MUC19	Q7Z5P9	8384 aa		3.68	□□□□□ -1.82
KLC1-205	ENST00000380038	PHGR1	C9JFL3	82 aa		3.38	□□□□□ -1.87
KLC1-205	ENST00000380038	AHNAK	Q09666	5890 aa	Known RBP	3.35	□□□□□ -1.87
KLC1-205	ENST00000380038	LCE1F	Q5T754	118 aa		3.33	□□□□□ -1.88
KLC1-205	ENST00000380038	MUC16	Q8WXI7	14507 aa		2.22	□□□□□ -2.05

Retrieved 77 of 20,778 RNA–protein pairs in 8.2 ms