RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 MACF1Q9UPN3 7388 aaKnown RBP5.22□□□□□ -1.57
SNX2-201ENST00000379516 MUC12Q9UKN1 5478 aa5.18□□□□□ -1.58
SNX2-201ENST00000379516 SPRR2FQ96RM1 72 aa5.15□□□□□ -1.58
SNX2-201ENST00000379516 KRTAP9-6A0A140TA67 174 aa5.14□□□□□ -1.59
SNX2-201ENST00000379516 KRTAP9-6A8MVA2 160 aa5.13□□□□□ -1.59
SNX2-201ENST00000379516 KRTAP19-3Q7Z4W3 81 aa5.13□□□□□ -1.59
SNX2-201ENST00000379516 MT1GP13640 62 aa5.09□□□□□ -1.59
SNX2-201ENST00000379516 SYNE2Q8WXH0 6885 aaKnown RBP5.07□□□□□ -1.6
SNX2-201ENST00000379516 MT1MQ8N339 61 aa5.06□□□□□ -1.6
SNX2-201ENST00000379516 KRTAP4-3Q9BYR4 195 aa5.03□□□□□ -1.6
SNX2-201ENST00000379516 LCE5AQ5TCM9 118 aa5□□□□□ -1.61
SNX2-201ENST00000379516 A0A0A0MQY5 61 aa4.97□□□□□ -1.61
SNX2-201ENST00000379516 KRTAP5-9P26371 169 aa4.96□□□□□ -1.62
SNX2-201ENST00000379516 MDN1Q9NU22 5596 aa4.93□□□□□ -1.62
SNX2-201ENST00000379516 LCE1AQ5T7P2 110 aa4.87□□□□□ -1.63
SNX2-201ENST00000379516 DSTQ03001 7570 aaKnown RBP4.85□□□□□ -1.63
SNX2-201ENST00000379516 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.85□□□□□ -1.63
SNX2-201ENST00000379516 SPRR2EP22531 72 aa4.82□□□□□ -1.64
SNX2-201ENST00000379516 SPRR2BP35325 72 aa4.82□□□□□ -1.64
SNX2-201ENST00000379516 SPRR2AP35326 72 aa4.82□□□□□ -1.64
SNX2-201ENST00000379516 KRTAP2-3P0C7H8 128 aa4.8□□□□□ -1.64
SNX2-201ENST00000379516 KRTAP2-4Q9BYR9 128 aa4.8□□□□□ -1.64
SNX2-201ENST00000379516 KRTAP2-1Q9BYU5 128 aa4.8□□□□□ -1.64
SNX2-201ENST00000379516 KRTAP6-3Q3LI67 103 aa4.76□□□□□ -1.65
SNX2-201ENST00000379516 KRTAP9-7A8MTY7 169 aa4.67□□□□□ -1.66
SNX2-201ENST00000379516 SPRR2DP22532 72 aa4.63□□□□□ -1.67
SNX2-201ENST00000379516 INE1O15225 51 aa4.59□□□□□ -1.67
SNX2-201ENST00000379516 LCE3BQ5TA77 95 aa4.58□□□□□ -1.68
SNX2-201ENST00000379516 KRTAP4-12Q9BQ66 201 aa4.56□□□□□ -1.68
SNX2-201ENST00000379516 KRTAP5-5Q701N2 237 aaPredicted RBP4.52□□□□□ -1.69
SNX2-201ENST00000379516 KRTAP6-1Q3LI64 71 aa4.5□□□□□ -1.69
SNX2-201ENST00000379516 MT1AP04731 61 aa4.49□□□□□ -1.69
SNX2-201ENST00000379516 KRTAP9-9Q9BYP9 154 aa4.47□□□□□ -1.69
SNX2-201ENST00000379516 KRTAP9-4Q9BYQ2 154 aa4.47□□□□□ -1.69
SNX2-201ENST00000379516 NEBP20929 6669 aa4.44□□□□□ -1.7
SNX2-201ENST00000379516 SYNE1Q8NF91 8797 aaKnown RBP4.38□□□□□ -1.71
SNX2-201ENST00000379516 LCE1DQ5T752 114 aa4.31□□□□□ -1.72
SNX2-201ENST00000379516 KRTAP4-9Q9BYQ8 210 aa4.26□□□□□ -1.73
SNX2-201ENST00000379516 KRTAP5-4Q6L8H1 288 aa4.19□□□□□ -1.74
SNX2-201ENST00000379516 KRTAP12-4P60329 112 aa4.16□□□□□ -1.74
SNX2-201ENST00000379516 KRTAP20-1Q3LI63 56 aa4.12□□□□□ -1.75
SNX2-201ENST00000379516 KRTAP4-2Q9BYR5 136 aa4.12□□□□□ -1.75
SNX2-201ENST00000379516 KRTAP6-2Q3LI66 62 aa4.1□□□□□ -1.75
SNX2-201ENST00000379516 LCE3DQ9BYE3 92 aa4.09□□□□□ -1.75
SNX2-201ENST00000379516 MT3P25713 68 aa4.07□□□□□ -1.76
SNX2-201ENST00000379516 KRTAP2-2Q9BYT5 123 aa4.06□□□□□ -1.76
SNX2-201ENST00000379516 LCE4AQ5TA78 99 aa4.06□□□□□ -1.76
SNX2-201ENST00000379516 MT4P47944 62 aa4.05□□□□□ -1.76
SNX2-201ENST00000379516 KRTAP4-11Q9BYQ6 195 aa4.01□□□□□ -1.77
SNX2-201ENST00000379516 LCE3EQ5T5B0 92 aa4□□□□□ -1.77
SNX2-201ENST00000379516 KRTAP20-2Q3LI61 65 aa3.94□□□□□ -1.78
SNX2-201ENST00000379516 HMCN1Q96RW7 5635 aa3.9□□□□□ -1.78
SNX2-201ENST00000379516 OBSCNQ5VST9 7968 aa3.86□□□□□ -1.79
SNX2-201ENST00000379516 KRTAP5-2Q701N4 177 aa3.83□□□□□ -1.8
SNX2-201ENST00000379516 KRTAP5-3Q6L8H2 238 aa3.79□□□□□ -1.8
SNX2-201ENST00000379516 PRM1P04553 51 aa3.62□□□□□ -1.83
SNX2-201ENST00000379516 LCE1EQ5T753 118 aa3.44□□□□□ -1.86
SNX2-201ENST00000379516 AHNAK2Q8IVF2 5795 aa3.37□□□□□ -1.87
SNX2-201ENST00000379516 MUC5ACP98088 5654 aa3.35□□□□□ -1.87
SNX2-201ENST00000379516 LCE1BQ5T7P3 118 aa3.33□□□□□ -1.88
SNX2-201ENST00000379516 KRTAP5-1Q6L8H4 278 aa3.31□□□□□ -1.88
SNX2-201ENST00000379516 KRTAP5-10Q6L8G5 202 aa3.25□□□□□ -1.89
SNX2-201ENST00000379516 GPR98Q8WXG9 6306 aa3.24□□□□□ -1.89
SNX2-201ENST00000379516 LCE1CQ5T751 118 aa3.23□□□□□ -1.89
SNX2-201ENST00000379516 KRTAP5-8O75690 187 aa3.22□□□□□ -1.89
SNX2-201ENST00000379516 KRTAP5-7Q6L8G8 165 aa3.12□□□□□ -1.91
SNX2-201ENST00000379516 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.02□□□□□ -1.93
SNX2-201ENST00000379516 KRTAP21-2Q3LI59 83 aa2.92□□□□□ -1.94
SNX2-201ENST00000379516 MUC5BQ9HC84 5762 aaPredicted RBP2.83□□□□□ -1.96
SNX2-201ENST00000379516 KRTAP5-11Q6L8G4 156 aa2.81□□□□□ -1.96
SNX2-201ENST00000379516 KRTAP4-4Q9BYR3 166 aa2.65□□□□□ -1.99
SNX2-201ENST00000379516 AHNAKQ09666 5890 aaKnown RBP2.61□□□□□ -1.99
SNX2-201ENST00000379516 LCE1FQ5T754 118 aa2.45□□□□□ -2.02
SNX2-201ENST00000379516 PHGR1C9JFL3 82 aa2.42□□□□□ -2.02
SNX2-201ENST00000379516 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
SNX2-201ENST00000379516 KRTAP21-1Q3LI58 79 aa2.22□□□□□ -2.05
SNX2-201ENST00000379516 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 75.4 ms