RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 KRTAP9-6A8MVA2 160 aa5.16□□□□□ -1.58
PRNP-201ENST00000379440 MUC12Q9UKN1 5478 aa5.09□□□□□ -1.59
PRNP-201ENST00000379440 KRTAP19-4Q3LI73 84 aa5.07□□□□□ -1.6
PRNP-201ENST00000379440 MACF1Q9UPN3 7388 aaKnown RBP5.03□□□□□ -1.6
PRNP-201ENST00000379440 KRTAP4-3Q9BYR4 195 aa4.99□□□□□ -1.61
PRNP-201ENST00000379440 KRTAP9-7A8MTY7 169 aa4.98□□□□□ -1.61
PRNP-201ENST00000379440 KRTAP19-3Q7Z4W3 81 aa4.97□□□□□ -1.61
PRNP-201ENST00000379440 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.95□□□□□ -1.62
PRNP-201ENST00000379440 SPRR2FQ96RM1 72 aa4.95□□□□□ -1.62
PRNP-201ENST00000379440 MT1MQ8N339 61 aa4.93□□□□□ -1.62
PRNP-201ENST00000379440 MT1GP13640 62 aa4.93□□□□□ -1.62
PRNP-201ENST00000379440 LOC100996750A0A140TA64 210 aa4.9□□□□□ -1.63
PRNP-201ENST00000379440 SYNE2Q8WXH0 6885 aaKnown RBP4.9□□□□□ -1.63
PRNP-201ENST00000379440 KRTAP2-3P0C7H8 128 aa4.89□□□□□ -1.63
PRNP-201ENST00000379440 KRTAP2-4Q9BYR9 128 aa4.89□□□□□ -1.63
PRNP-201ENST00000379440 KRTAP2-1Q9BYU5 128 aa4.89□□□□□ -1.63
PRNP-201ENST00000379440 KRTAP2-2Q9BYT5 123 aa4.85□□□□□ -1.63
PRNP-201ENST00000379440 DSTQ03001 7570 aaKnown RBP4.84□□□□□ -1.63
PRNP-201ENST00000379440 LCE5AQ5TCM9 118 aa4.84□□□□□ -1.63
PRNP-201ENST00000379440 MDN1Q9NU22 5596 aa4.75□□□□□ -1.65
PRNP-201ENST00000379440 KRTAP5-9P26371 169 aa4.69□□□□□ -1.66
PRNP-201ENST00000379440 LCE1AQ5T7P2 110 aa4.66□□□□□ -1.66
PRNP-201ENST00000379440 SPRR2EP22531 72 aa4.58□□□□□ -1.68
PRNP-201ENST00000379440 SPRR2BP35325 72 aa4.58□□□□□ -1.68
PRNP-201ENST00000379440 SPRR2AP35326 72 aa4.58□□□□□ -1.68
PRNP-201ENST00000379440 KRTAP12-4P60329 112 aa4.57□□□□□ -1.68
PRNP-201ENST00000379440 KRTAP6-3Q3LI67 103 aa4.54□□□□□ -1.68
PRNP-201ENST00000379440 KRTAP6-1Q3LI64 71 aa4.43□□□□□ -1.7
PRNP-201ENST00000379440 LCE3BQ5TA77 95 aa4.42□□□□□ -1.7
PRNP-201ENST00000379440 LCE1EQ5T753 118 aa4.41□□□□□ -1.7
PRNP-201ENST00000379440 SPRR2DP22532 72 aa4.39□□□□□ -1.71
PRNP-201ENST00000379440 KRTAP5-5Q701N2 237 aaPredicted RBP4.39□□□□□ -1.71
PRNP-201ENST00000379440 SYNE1Q8NF91 8797 aaKnown RBP4.39□□□□□ -1.71
PRNP-201ENST00000379440 NEBP20929 6669 aa4.38□□□□□ -1.71
PRNP-201ENST00000379440 MT1AP04731 61 aa4.38□□□□□ -1.71
PRNP-201ENST00000379440 KRTAP20-1Q3LI63 56 aa4.36□□□□□ -1.71
PRNP-201ENST00000379440 KRTAP4-9Q9BYQ8 210 aa4.3□□□□□ -1.72
PRNP-201ENST00000379440 LCE1DQ5T752 114 aa4.24□□□□□ -1.73
PRNP-201ENST00000379440 LCE1FQ5T754 118 aa4.22□□□□□ -1.73
PRNP-201ENST00000379440 KRTAP9-4Q9BYQ2 154 aa4.15□□□□□ -1.74
PRNP-201ENST00000379440 PRM1P04553 51 aa4.14□□□□□ -1.75
PRNP-201ENST00000379440 LCE3DQ9BYE3 92 aa4.07□□□□□ -1.76
PRNP-201ENST00000379440 KRTAP6-2Q3LI66 62 aa4.02□□□□□ -1.77
PRNP-201ENST00000379440 OBSCNQ5VST9 7968 aa4□□□□□ -1.77
PRNP-201ENST00000379440 KRTAP5-4Q6L8H1 288 aa3.99□□□□□ -1.77
PRNP-201ENST00000379440 LCE3EQ5T5B0 92 aa3.98□□□□□ -1.77
PRNP-201ENST00000379440 MT3P25713 68 aa3.95□□□□□ -1.78
PRNP-201ENST00000379440 KRTAP4-6Q9BYQ5 205 aa3.89□□□□□ -1.79
PRNP-201ENST00000379440 MT4P47944 62 aa3.88□□□□□ -1.79
PRNP-201ENST00000379440 GPR98Q8WXG9 6306 aa3.81□□□□□ -1.8
PRNP-201ENST00000379440 LCE4AQ5TA78 99 aa3.8□□□□□ -1.8
PRNP-201ENST00000379440 KRTAP20-2Q3LI61 65 aa3.77□□□□□ -1.81
PRNP-201ENST00000379440 HMCN1Q96RW7 5635 aa3.72□□□□□ -1.81
PRNP-201ENST00000379440 KRTAP5-2Q701N4 177 aa3.68□□□□□ -1.82
PRNP-201ENST00000379440 KRTAP5-3Q6L8H2 238 aa3.6□□□□□ -1.83
PRNP-201ENST00000379440 KRTAP9-9Q9BYP9 154 aa3.44□□□□□ -1.86
PRNP-201ENST00000379440 AHNAK2Q8IVF2 5795 aa3.43□□□□□ -1.86
PRNP-201ENST00000379440 KRTAP5-10Q6L8G5 202 aa3.43□□□□□ -1.86
PRNP-201ENST00000379440 KRTAP5-7Q6L8G8 165 aa3.37□□□□□ -1.87
PRNP-201ENST00000379440 MUC5ACP98088 5654 aa3.31□□□□□ -1.88
PRNP-201ENST00000379440 LCE1BQ5T7P3 118 aa3.25□□□□□ -1.89
PRNP-201ENST00000379440 KRTAP5-1Q6L8H4 278 aa3.18□□□□□ -1.9
PRNP-201ENST00000379440 KRTAP4-11Q9BYQ6 195 aa3.18□□□□□ -1.9
PRNP-201ENST00000379440 KRTAP4-2Q9BYR5 136 aa3.14□□□□□ -1.91
PRNP-201ENST00000379440 LCE1CQ5T751 118 aa3.1□□□□□ -1.91
PRNP-201ENST00000379440 KRTAP5-8O75690 187 aa3.06□□□□□ -1.92
PRNP-201ENST00000379440 AHNAKQ09666 5890 aaKnown RBP3□□□□□ -1.93
PRNP-201ENST00000379440 MUC19Q7Z5P9 8384 aa2.95□□□□□ -1.94
PRNP-201ENST00000379440 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.9□□□□□ -1.94
PRNP-201ENST00000379440 KRTAP21-2Q3LI59 83 aa2.87□□□□□ -1.95
PRNP-201ENST00000379440 MUC5BQ9HC84 5762 aaPredicted RBP2.85□□□□□ -1.95
PRNP-201ENST00000379440 KRTAP5-11Q6L8G4 156 aa2.69□□□□□ -1.98
PRNP-201ENST00000379440 KRTAP21-1Q3LI58 79 aa2.69□□□□□ -1.98
PRNP-201ENST00000379440 KRTAP4-4Q9BYR3 166 aa2.65□□□□□ -1.99
PRNP-201ENST00000379440 KRTAP4-12Q9BQ66 201 aa2.62□□□□□ -1.99
PRNP-201ENST00000379440 PHGR1C9JFL3 82 aa2.34□□□□□ -2.04
PRNP-201ENST00000379440 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 192.7 ms