RNA–Protein interactions for RNA: ENST00000378910.9

NPHS1-202, Transcript of NPHS1, nephrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHS1, Length 4,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1-202ENST00000378910 SPRR2FQ96RM1 72 aa3.89□□□□□ -1.79
NPHS1-202ENST00000378910 KRTAP9-7A8MTY7 169 aa3.87□□□□□ -1.79
NPHS1-202ENST00000378910 KRTAP2-3P0C7H8 128 aa3.86□□□□□ -1.79
NPHS1-202ENST00000378910 KRTAP2-4Q9BYR9 128 aa3.86□□□□□ -1.79
NPHS1-202ENST00000378910 KRTAP2-1Q9BYU5 128 aa3.86□□□□□ -1.79
NPHS1-202ENST00000378910 LCE3BQ5TA77 95 aa3.85□□□□□ -1.79
NPHS1-202ENST00000378910 PRM1P04553 51 aa3.82□□□□□ -1.8
NPHS1-202ENST00000378910 MT1LQ93083 61 aa3.82□□□□□ -1.8
NPHS1-202ENST00000378910 FCGBPQ9Y6R7 5405 aaPredicted RBP3.78□□□□□ -1.8
NPHS1-202ENST00000378910 MT1EP04732 61 aa3.76□□□□□ -1.81
NPHS1-202ENST00000378910 LCE1AQ5T7P2 110 aa3.71□□□□□ -1.82
NPHS1-202ENST00000378910 LCE3EQ5T5B0 92 aa3.7□□□□□ -1.82
NPHS1-202ENST00000378910 KRTAP19-7Q3SYF9 63 aa3.69□□□□□ -1.82
NPHS1-202ENST00000378910 LCE3DQ9BYE3 92 aa3.69□□□□□ -1.82
NPHS1-202ENST00000378910 SSPOA2VEC9 5147 aa3.69□□□□□ -1.82
NPHS1-202ENST00000378910 KRTAP9-6A8MVA2 160 aa3.68□□□□□ -1.82
NPHS1-202ENST00000378910 MUC12Q9UKN1 5478 aa3.66□□□□□ -1.82
NPHS1-202ENST00000378910 SPRR2EP22531 72 aa3.65□□□□□ -1.82
NPHS1-202ENST00000378910 SPRR2BP35325 72 aa3.65□□□□□ -1.82
NPHS1-202ENST00000378910 SPRR2AP35326 72 aa3.65□□□□□ -1.82
NPHS1-202ENST00000378910 LOC100996750A0A140TA64 210 aa3.65□□□□□ -1.83
NPHS1-202ENST00000378910 KRTAP20-1Q3LI63 56 aa3.65□□□□□ -1.83
NPHS1-202ENST00000378910 KRTAP19-3Q7Z4W3 81 aa3.65□□□□□ -1.83
NPHS1-202ENST00000378910 SYNE2Q8WXH0 6885 aaKnown RBP3.63□□□□□ -1.83
NPHS1-202ENST00000378910 LCE1EQ5T753 118 aa3.61□□□□□ -1.83
NPHS1-202ENST00000378910 KRTAP4-3Q9BYR4 195 aa3.61□□□□□ -1.83
NPHS1-202ENST00000378910 MACF1Q9UPN3 7388 aaKnown RBP3.59□□□□□ -1.84
NPHS1-202ENST00000378910 MT1MQ8N339 61 aa3.58□□□□□ -1.84
NPHS1-202ENST00000378910 KRTAP2-2Q9BYT5 123 aa3.57□□□□□ -1.84
NPHS1-202ENST00000378910 GPR98Q8WXG9 6306 aa3.57□□□□□ -1.84
NPHS1-202ENST00000378910 SPRR2DP22532 72 aa3.56□□□□□ -1.84
NPHS1-202ENST00000378910 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.55□□□□□ -1.84
NPHS1-202ENST00000378910 MT3P25713 68 aa3.52□□□□□ -1.85
NPHS1-202ENST00000378910 KRTAP6-3Q3LI67 103 aa3.51□□□□□ -1.85
NPHS1-202ENST00000378910 KRTAP4-9Q9BYQ8 210 aa3.45□□□□□ -1.86
NPHS1-202ENST00000378910 KRTAP19-6Q3LI70 58 aa3.42□□□□□ -1.86
NPHS1-202ENST00000378910 LCE1DQ5T752 114 aa3.38□□□□□ -1.87
NPHS1-202ENST00000378910 MDN1Q9NU22 5596 aa3.33□□□□□ -1.88
NPHS1-202ENST00000378910 MUC19Q7Z5P9 8384 aa3.32□□□□□ -1.88
NPHS1-202ENST00000378910 MT1AP04731 61 aa3.31□□□□□ -1.88
NPHS1-202ENST00000378910 LCE1FQ5T754 118 aa3.29□□□□□ -1.88
NPHS1-202ENST00000378910 KRTAP6-2Q3LI66 62 aa3.26□□□□□ -1.89
NPHS1-202ENST00000378910 KRTAP6-1Q3LI64 71 aa3.23□□□□□ -1.89
NPHS1-202ENST00000378910 LCE5AQ5TCM9 118 aa3.19□□□□□ -1.9
NPHS1-202ENST00000378910 NEBP20929 6669 aa3.19□□□□□ -1.9
NPHS1-202ENST00000378910 MT4P47944 62 aa3.14□□□□□ -1.91
NPHS1-202ENST00000378910 KRTAP9-4Q9BYQ2 154 aa3.03□□□□□ -1.92
NPHS1-202ENST00000378910 KRTAP5-5Q701N2 237 aaPredicted RBP2.98□□□□□ -1.93
NPHS1-202ENST00000378910 LCE1BQ5T7P3 118 aa2.96□□□□□ -1.94
NPHS1-202ENST00000378910 LCE4AQ5TA78 99 aa2.91□□□□□ -1.94
NPHS1-202ENST00000378910 KRTAP4-11Q9BYQ6 195 aa2.79□□□□□ -1.96
NPHS1-202ENST00000378910 KRTAP5-9P26371 169 aa2.71□□□□□ -1.98
NPHS1-202ENST00000378910 KRTAP9-9Q9BYP9 154 aa2.68□□□□□ -1.98
NPHS1-202ENST00000378910 KRTAP4-6Q9BYQ5 205 aa2.62□□□□□ -1.99
NPHS1-202ENST00000378910 AHNAK2Q8IVF2 5795 aa2.54□□□□□ -2
NPHS1-202ENST00000378910 MUC5ACP98088 5654 aa2.48□□□□□ -2.01
NPHS1-202ENST00000378910 HMCN1Q96RW7 5635 aa2.47□□□□□ -2.01
NPHS1-202ENST00000378910 KRTAP20-2Q3LI61 65 aa2.43□□□□□ -2.02
NPHS1-202ENST00000378910 LCE1CQ5T751 118 aa2.41□□□□□ -2.02
NPHS1-202ENST00000378910 KRTAP5-3Q6L8H2 238 aa2.37□□□□□ -2.03
NPHS1-202ENST00000378910 AHNAKQ09666 5890 aaKnown RBP2.28□□□□□ -2.04
NPHS1-202ENST00000378910 KRTAP5-4Q6L8H1 288 aa2.25□□□□□ -2.05
NPHS1-202ENST00000378910 KRTAP4-4Q9BYR3 166 aa2.23□□□□□ -2.05
NPHS1-202ENST00000378910 KRTAP4-12Q9BQ66 201 aa2.21□□□□□ -2.06
NPHS1-202ENST00000378910 MUC5BQ9HC84 5762 aaPredicted RBP2.17□□□□□ -2.06
NPHS1-202ENST00000378910 KRTAP4-2Q9BYR5 136 aa2.17□□□□□ -2.06
NPHS1-202ENST00000378910 KRTAP5-2Q701N4 177 aa2.16□□□□□ -2.06
NPHS1-202ENST00000378910 KRTAP5-10Q6L8G5 202 aa2.14□□□□□ -2.07
NPHS1-202ENST00000378910 KRTAP5-7Q6L8G8 165 aa2.1□□□□□ -2.07
NPHS1-202ENST00000378910 KRTAP21-1Q3LI58 79 aa2.04□□□□□ -2.08
NPHS1-202ENST00000378910 KRTAP5-8O75690 187 aa2.01□□□□□ -2.09
NPHS1-202ENST00000378910 PHGR1C9JFL3 82 aa1.92□□□□□ -2.1
NPHS1-202ENST00000378910 KRTAP5-1Q6L8H4 278 aa1.82□□□□□ -2.12
NPHS1-202ENST00000378910 KRTAP21-2Q3LI59 83 aa1.81□□□□□ -2.12
NPHS1-202ENST00000378910 KRTAP5-11Q6L8G4 156 aa1.7□□□□□ -2.14
NPHS1-202ENST00000378910 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.67□□□□□ -2.14
NPHS1-202ENST00000378910 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 69 ms