RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 MT1BP07438 61 aa3.14□□□□□ -1.91
PTPRR-203ENST00000378778 LCE1DQ5T752 114 aa3.14□□□□□ -1.91
PTPRR-203ENST00000378778 LCE1FQ5T754 118 aa3.13□□□□□ -1.91
PTPRR-203ENST00000378778 SYNE2Q8WXH0 6885 aaKnown RBP3.08□□□□□ -1.92
PTPRR-203ENST00000378778 LCE3CQ5T5A8 94 aa3.07□□□□□ -1.92
PTPRR-203ENST00000378778 LCE1AQ5T7P2 110 aa3.07□□□□□ -1.92
PTPRR-203ENST00000378778 KRTAP4-2Q9BYR5 136 aa3.07□□□□□ -1.92
PTPRR-203ENST00000378778 KRTAP4-9Q9BYQ8 210 aa3.06□□□□□ -1.92
PTPRR-203ENST00000378778 KRTAP10-7P60409 375 aaPredicted RBP3.03□□□□□ -1.92
PTPRR-203ENST00000378778 SSPOA2VEC9 5147 aa3.02□□□□□ -1.93
PTPRR-203ENST00000378778 MACF1Q9UPN3 7388 aaKnown RBP3.01□□□□□ -1.93
PTPRR-203ENST00000378778 USH2AO75445 5202 aa3.01□□□□□ -1.93
PTPRR-203ENST00000378778 FCGBPQ9Y6R7 5405 aaPredicted RBP3□□□□□ -1.93
PTPRR-203ENST00000378778 KRTAP2-3P0C7H8 128 aa2.98□□□□□ -1.93
PTPRR-203ENST00000378778 KRTAP2-4Q9BYR9 128 aa2.98□□□□□ -1.93
PTPRR-203ENST00000378778 KRTAP2-1Q9BYU5 128 aa2.98□□□□□ -1.93
PTPRR-203ENST00000378778 KRTAP19-5Q3LI72 72 aa2.97□□□□□ -1.93
PTPRR-203ENST00000378778 KRTAP4-11Q9BYQ6 195 aa2.93□□□□□ -1.94
PTPRR-203ENST00000378778 KRTAP2-2Q9BYT5 123 aa2.9□□□□□ -1.94
PTPRR-203ENST00000378778 NEBP20929 6669 aa2.88□□□□□ -1.95
PTPRR-203ENST00000378778 KRTAP9-6A8MVA2 160 aa2.86□□□□□ -1.95
PTPRR-203ENST00000378778 KRTAP19-7Q3SYF9 63 aa2.81□□□□□ -1.96
PTPRR-203ENST00000378778 MUC12Q9UKN1 5478 aa2.81□□□□□ -1.96
PTPRR-203ENST00000378778 MT3P25713 68 aa2.79□□□□□ -1.96
PTPRR-203ENST00000378778 KRTAP6-3Q3LI67 103 aa2.78□□□□□ -1.96
PTPRR-203ENST00000378778 MT1LQ93083 61 aa2.77□□□□□ -1.97
PTPRR-203ENST00000378778 KRTAP20-1Q3LI63 56 aa2.77□□□□□ -1.97
PTPRR-203ENST00000378778 MT1EP04732 61 aa2.75□□□□□ -1.97
PTPRR-203ENST00000378778 LCE3EQ5T5B0 92 aa2.74□□□□□ -1.97
PTPRR-203ENST00000378778 KMT2DO14686 5537 aa2.73□□□□□ -1.97
PTPRR-203ENST00000378778 MDN1Q9NU22 5596 aa2.67□□□□□ -1.98
PTPRR-203ENST00000378778 GPR98Q8WXG9 6306 aa2.67□□□□□ -1.98
PTPRR-203ENST00000378778 KRTAP19-6Q3LI70 58 aa2.65□□□□□ -1.99
PTPRR-203ENST00000378778 LCE1EQ5T753 118 aa2.64□□□□□ -1.99
PTPRR-203ENST00000378778 KRTAP12-4P60329 112 aa2.6□□□□□ -1.99
PTPRR-203ENST00000378778 MT1GP13640 62 aa2.59□□□□□ -1.99
PTPRR-203ENST00000378778 MT1AP04731 61 aa2.55□□□□□ -2
PTPRR-203ENST00000378778 MT1MQ8N339 61 aa2.55□□□□□ -2
PTPRR-203ENST00000378778 HMCN1Q96RW7 5635 aa2.54□□□□□ -2
PTPRR-203ENST00000378778 KRTAP19-3Q7Z4W3 81 aa2.54□□□□□ -2
PTPRR-203ENST00000378778 KRTAP5-9P26371 169 aa2.48□□□□□ -2.01
PTPRR-203ENST00000378778 LCE3DQ9BYE3 92 aa2.48□□□□□ -2.01
PTPRR-203ENST00000378778 KRTAP4-3Q9BYR4 195 aa2.44□□□□□ -2.02
PTPRR-203ENST00000378778 DSTQ03001 7570 aaKnown RBP2.43□□□□□ -2.02
PTPRR-203ENST00000378778 SPRR2EP22531 72 aa2.39□□□□□ -2.03
PTPRR-203ENST00000378778 SPRR2BP35325 72 aa2.39□□□□□ -2.03
PTPRR-203ENST00000378778 SPRR2AP35326 72 aa2.39□□□□□ -2.03
PTPRR-203ENST00000378778 SPRR2FQ96RM1 72 aa2.34□□□□□ -2.03
PTPRR-203ENST00000378778 KRTAP5-5Q701N2 237 aaPredicted RBP2.32□□□□□ -2.04
PTPRR-203ENST00000378778 SPRR2DP22532 72 aa2.31□□□□□ -2.04
PTPRR-203ENST00000378778 PRM1P04553 51 aa2.3□□□□□ -2.04
PTPRR-203ENST00000378778 KRTAP6-1Q3LI64 71 aa2.3□□□□□ -2.04
PTPRR-203ENST00000378778 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.29□□□□□ -2.04
PTPRR-203ENST00000378778 AHNAK2Q8IVF2 5795 aa2.26□□□□□ -2.05
PTPRR-203ENST00000378778 KRTAP5-10Q6L8G5 202 aa2.2□□□□□ -2.06
PTPRR-203ENST00000378778 KRTAP6-2Q3LI66 62 aa2.19□□□□□ -2.06
PTPRR-203ENST00000378778 SYNE1Q8NF91 8797 aaKnown RBP2.14□□□□□ -2.07
PTPRR-203ENST00000378778 KRTAP5-7Q6L8G8 165 aa2.14□□□□□ -2.07
PTPRR-203ENST00000378778 MT4P47944 62 aa2.09□□□□□ -2.07
PTPRR-203ENST00000378778 MUC5BQ9HC84 5762 aaPredicted RBP2.02□□□□□ -2.09
PTPRR-203ENST00000378778 AHNAKQ09666 5890 aaKnown RBP2.01□□□□□ -2.09
PTPRR-203ENST00000378778 KRTAP5-11Q6L8G4 156 aa1.98□□□□□ -2.09
PTPRR-203ENST00000378778 KRTAP5-4Q6L8H1 288 aa1.97□□□□□ -2.09
PTPRR-203ENST00000378778 MUC5ACP98088 5654 aa1.92□□□□□ -2.1
PTPRR-203ENST00000378778 KRTAP5-2Q701N4 177 aa1.84□□□□□ -2.12
PTPRR-203ENST00000378778 KRTAP20-2Q3LI61 65 aa1.83□□□□□ -2.12
PTPRR-203ENST00000378778 KRTAP5-1Q6L8H4 278 aa1.83□□□□□ -2.12
PTPRR-203ENST00000378778 OBSCNQ5VST9 7968 aa1.79□□□□□ -2.12
PTPRR-203ENST00000378778 KRTAP5-8O75690 187 aa1.78□□□□□ -2.12
PTPRR-203ENST00000378778 KRTAP4-4Q9BYR3 166 aa1.77□□□□□ -2.13
PTPRR-203ENST00000378778 MUC19Q7Z5P9 8384 aa1.66□□□□□ -2.14
PTPRR-203ENST00000378778 LCE1CQ5T751 118 aa1.64□□□□□ -2.15
PTPRR-203ENST00000378778 LCE1BQ5T7P3 118 aa1.64□□□□□ -2.15
PTPRR-203ENST00000378778 KRTAP21-1Q3LI58 79 aa1.55□□□□□ -2.16
PTPRR-203ENST00000378778 KRTAP21-2Q3LI59 83 aa1.51□□□□□ -2.17
PTPRR-203ENST00000378778 PHGR1C9JFL3 82 aa1.3□□□□□ -2.2
PTPRR-203ENST00000378778 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 51.1 ms