RNA–Protein interactions for RNA: ENST00000378585.6

GABRD-201, Transcript of gamma-aminobutyric acid type A receptor delta subunit, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GABRD, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRD-201ENST00000378585 KRTAP9-6A8MVA2 160 aa6.76□□□□□ -1.33
GABRD-201ENST00000378585 KRTAP19-3Q7Z4W3 81 aa6.71□□□□□ -1.34
GABRD-201ENST00000378585 SPRR2FQ96RM1 72 aa6.68□□□□□ -1.34
GABRD-201ENST00000378585 MACF1Q9UPN3 7388 aaKnown RBP6.67□□□□□ -1.34
GABRD-201ENST00000378585 MT1GP13640 62 aa6.66□□□□□ -1.34
GABRD-201ENST00000378585 MUC12Q9UKN1 5478 aa6.63□□□□□ -1.35
GABRD-201ENST00000378585 MT1MQ8N339 61 aa6.62□□□□□ -1.35
GABRD-201ENST00000378585 KRTAP4-3Q9BYR4 195 aa6.56□□□□□ -1.36
GABRD-201ENST00000378585 LCE5AQ5TCM9 118 aa6.54□□□□□ -1.36
GABRD-201ENST00000378585 KRTAP5-9P26371 169 aa6.45□□□□□ -1.38
GABRD-201ENST00000378585 SYNE2Q8WXH0 6885 aaKnown RBP6.44□□□□□ -1.38
GABRD-201ENST00000378585 LOC100996750A0A140TA64 210 aa6.41□□□□□ -1.38
GABRD-201ENST00000378585 KRTAP2-3P0C7H8 128 aa6.38□□□□□ -1.39
GABRD-201ENST00000378585 KRTAP2-4Q9BYR9 128 aa6.38□□□□□ -1.39
GABRD-201ENST00000378585 KRTAP2-1Q9BYU5 128 aa6.38□□□□□ -1.39
GABRD-201ENST00000378585 INE1O15225 51 aa6.35□□□□□ -1.39
GABRD-201ENST00000378585 LCE1AQ5T7P2 110 aa6.32□□□□□ -1.4
GABRD-201ENST00000378585 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.29□□□□□ -1.4
GABRD-201ENST00000378585 SPRR2EP22531 72 aa6.23□□□□□ -1.41
GABRD-201ENST00000378585 SPRR2BP35325 72 aa6.23□□□□□ -1.41
GABRD-201ENST00000378585 SPRR2AP35326 72 aa6.23□□□□□ -1.41
GABRD-201ENST00000378585 MDN1Q9NU22 5596 aa6.2□□□□□ -1.42
GABRD-201ENST00000378585 DSTQ03001 7570 aaKnown RBP6.17□□□□□ -1.42
GABRD-201ENST00000378585 KRTAP6-3Q3LI67 103 aa6.16□□□□□ -1.42
GABRD-201ENST00000378585 KRTAP9-7A8MTY7 169 aa6.14□□□□□ -1.43
GABRD-201ENST00000378585 SPRR2DP22532 72 aa5.98□□□□□ -1.45
GABRD-201ENST00000378585 KRTAP5-5Q701N2 237 aaPredicted RBP5.93□□□□□ -1.46
GABRD-201ENST00000378585 MT1AP04731 61 aa5.9□□□□□ -1.46
GABRD-201ENST00000378585 KRTAP6-1Q3LI64 71 aa5.88□□□□□ -1.47
GABRD-201ENST00000378585 LCE3BQ5TA77 95 aa5.82□□□□□ -1.48
GABRD-201ENST00000378585 NEBP20929 6669 aa5.67□□□□□ -1.5
GABRD-201ENST00000378585 SYNE1Q8NF91 8797 aaKnown RBP5.66□□□□□ -1.5
GABRD-201ENST00000378585 KRTAP9-4Q9BYQ2 154 aa5.58□□□□□ -1.52
GABRD-201ENST00000378585 KRTAP4-9Q9BYQ8 210 aa5.57□□□□□ -1.52
GABRD-201ENST00000378585 KRTAP12-4P60329 112 aa5.49□□□□□ -1.53
GABRD-201ENST00000378585 KRTAP5-4Q6L8H1 288 aa5.47□□□□□ -1.53
GABRD-201ENST00000378585 KRTAP20-1Q3LI63 56 aa5.39□□□□□ -1.55
GABRD-201ENST00000378585 LCE3DQ9BYE3 92 aa5.39□□□□□ -1.55
GABRD-201ENST00000378585 KRTAP6-2Q3LI66 62 aa5.36□□□□□ -1.55
GABRD-201ENST00000378585 MT3P25713 68 aa5.33□□□□□ -1.56
GABRD-201ENST00000378585 LCE3EQ5T5B0 92 aa5.28□□□□□ -1.56
GABRD-201ENST00000378585 LCE4AQ5TA78 99 aa5.27□□□□□ -1.57
GABRD-201ENST00000378585 MT4P47944 62 aa5.22□□□□□ -1.57
GABRD-201ENST00000378585 KRTAP4-6Q9BYQ5 205 aa5.22□□□□□ -1.57
GABRD-201ENST00000378585 KRTAP2-2Q9BYT5 123 aa5.22□□□□□ -1.57
GABRD-201ENST00000378585 KRTAP20-2Q3LI61 65 aa5.12□□□□□ -1.59
GABRD-201ENST00000378585 LCE1DQ5T752 114 aa5.04□□□□□ -1.6
GABRD-201ENST00000378585 KRTAP5-2Q701N4 177 aa5.03□□□□□ -1.6
GABRD-201ENST00000378585 HMCN1Q96RW7 5635 aa4.98□□□□□ -1.61
GABRD-201ENST00000378585 KRTAP5-3Q6L8H2 238 aa4.91□□□□□ -1.62
GABRD-201ENST00000378585 OBSCNQ5VST9 7968 aa4.88□□□□□ -1.63
GABRD-201ENST00000378585 PRM1P04553 51 aa4.8□□□□□ -1.64
GABRD-201ENST00000378585 LCE1EQ5T753 118 aa4.52□□□□□ -1.69
GABRD-201ENST00000378585 GPR98Q8WXG9 6306 aa4.5□□□□□ -1.69
GABRD-201ENST00000378585 KRTAP4-11Q9BYQ6 195 aa4.34□□□□□ -1.71
GABRD-201ENST00000378585 MUC5ACP98088 5654 aa4.33□□□□□ -1.72
GABRD-201ENST00000378585 KRTAP5-1Q6L8H4 278 aa4.31□□□□□ -1.72
GABRD-201ENST00000378585 LCE1BQ5T7P3 118 aa4.31□□□□□ -1.72
GABRD-201ENST00000378585 AHNAK2Q8IVF2 5795 aa4.3□□□□□ -1.72
GABRD-201ENST00000378585 KRTAP5-10Q6L8G5 202 aa4.28□□□□□ -1.72
GABRD-201ENST00000378585 KRTAP4-2Q9BYR5 136 aa4.23□□□□□ -1.73
GABRD-201ENST00000378585 LCE1CQ5T751 118 aa4.23□□□□□ -1.73
GABRD-201ENST00000378585 KRTAP5-8O75690 187 aa4.18□□□□□ -1.74
GABRD-201ENST00000378585 KRTAP5-7Q6L8G8 165 aa4.09□□□□□ -1.75
GABRD-201ENST00000378585 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.98□□□□□ -1.77
GABRD-201ENST00000378585 KRTAP21-2Q3LI59 83 aa3.83□□□□□ -1.8
GABRD-201ENST00000378585 KRTAP5-11Q6L8G4 156 aa3.7□□□□□ -1.82
GABRD-201ENST00000378585 KRTAP9-9Q9BYP9 154 aa3.67□□□□□ -1.82
GABRD-201ENST00000378585 MUC5BQ9HC84 5762 aaPredicted RBP3.53□□□□□ -1.84
GABRD-201ENST00000378585 AHNAKQ09666 5890 aaKnown RBP3.51□□□□□ -1.85
GABRD-201ENST00000378585 KRTAP4-12Q9BQ66 201 aa3.45□□□□□ -1.86
GABRD-201ENST00000378585 KRTAP4-4Q9BYR3 166 aa3.43□□□□□ -1.86
GABRD-201ENST00000378585 LCE1FQ5T754 118 aa3.21□□□□□ -1.9
GABRD-201ENST00000378585 PHGR1C9JFL3 82 aa3.18□□□□□ -1.9
GABRD-201ENST00000378585 KRTAP21-1Q3LI58 79 aa3.01□□□□□ -1.93
GABRD-201ENST00000378585 MUC19Q7Z5P9 8384 aa2.94□□□□□ -1.94
GABRD-201ENST00000378585 MUC16Q8WXI7 14507 aa2.1□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 1496 ms