RNA–Protein interactions for RNA: ENST00000378313.6

C19orf54-201, Transcript of chromosome 19 open reading frame 54, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C19orf54, Length 2,753 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-201ENST00000378313 KRTAP12-4P60329 112 aa5.1□□□□□ -1.59
C19orf54-201ENST00000378313 MT1GP13640 62 aa5.05□□□□□ -1.6
C19orf54-201ENST00000378313 KRTAP4-3Q9BYR4 195 aa5.04□□□□□ -1.6
C19orf54-201ENST00000378313 MT1MQ8N339 61 aa5□□□□□ -1.61
C19orf54-201ENST00000378313 KRTAP19-6Q3LI70 58 aa4.97□□□□□ -1.61
C19orf54-201ENST00000378313 LCE2DQ5TA82 110 aaPredicted RBP4.95□□□□□ -1.62
C19orf54-201ENST00000378313 KRTAP19-3Q7Z4W3 81 aa4.95□□□□□ -1.62
C19orf54-201ENST00000378313 KRTAP9-2Q9BYQ4 174 aa4.95□□□□□ -1.62
C19orf54-201ENST00000378313 FCGBPQ9Y6R7 5405 aaPredicted RBP4.88□□□□□ -1.63
C19orf54-201ENST00000378313 CRCT1Q9UGL9 99 aa4.87□□□□□ -1.63
C19orf54-201ENST00000378313 MT1AP04731 61 aa4.8□□□□□ -1.64
C19orf54-201ENST00000378313 SYNE2Q8WXH0 6885 aaKnown RBP4.79□□□□□ -1.64
C19orf54-201ENST00000378313 MACF1Q9UPN3 7388 aaKnown RBP4.77□□□□□ -1.65
C19orf54-201ENST00000378313 LCE3BQ5TA77 95 aa4.75□□□□□ -1.65
C19orf54-201ENST00000378313 LCE5AQ5TCM9 118 aa4.74□□□□□ -1.65
C19orf54-201ENST00000378313 MUC12Q9UKN1 5478 aa4.71□□□□□ -1.66
C19orf54-201ENST00000378313 KRTAP4-9Q9BYQ8 210 aa4.68□□□□□ -1.66
C19orf54-201ENST00000378313 KRTAP9-6A0A140TA67 174 aa4.64□□□□□ -1.67
C19orf54-201ENST00000378313 LCE3DQ9BYE3 92 aa4.63□□□□□ -1.67
C19orf54-201ENST00000378313 LCE3EQ5T5B0 92 aa4.61□□□□□ -1.67
C19orf54-201ENST00000378313 KRTAP6-1Q3LI64 71 aa4.59□□□□□ -1.67
C19orf54-201ENST00000378313 PRM1P04553 51 aa4.58□□□□□ -1.68
C19orf54-201ENST00000378313 KRTAP5-5Q701N2 237 aaPredicted RBP4.58□□□□□ -1.68
C19orf54-201ENST00000378313 KRTAP9-7A8MTY7 169 aa4.57□□□□□ -1.68
C19orf54-201ENST00000378313 SPRR2FQ96RM1 72 aa4.55□□□□□ -1.68
C19orf54-201ENST00000378313 MDN1Q9NU22 5596 aa4.51□□□□□ -1.69
C19orf54-201ENST00000378313 SYNE1Q8NF91 8797 aaKnown RBP4.51□□□□□ -1.69
C19orf54-201ENST00000378313 DSTQ03001 7570 aaKnown RBP4.48□□□□□ -1.69
C19orf54-201ENST00000378313 KRTAP6-3Q3LI67 103 aa4.39□□□□□ -1.71
C19orf54-201ENST00000378313 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.36□□□□□ -1.71
C19orf54-201ENST00000378313 KRTAP6-2Q3LI66 62 aa4.31□□□□□ -1.72
C19orf54-201ENST00000378313 KRTAP9-4Q9BYQ2 154 aa4.27□□□□□ -1.73
C19orf54-201ENST00000378313 KRTAP2-2Q9BYT5 123 aa4.24□□□□□ -1.73
C19orf54-201ENST00000378313 LCE1AQ5T7P2 110 aa4.21□□□□□ -1.73
C19orf54-201ENST00000378313 KRTAP5-9P26371 169 aa4.13□□□□□ -1.75
C19orf54-201ENST00000378313 MT3P25713 68 aa4.08□□□□□ -1.76
C19orf54-201ENST00000378313 SPRR2EP22531 72 aa4.04□□□□□ -1.76
C19orf54-201ENST00000378313 SPRR2BP35325 72 aa4.04□□□□□ -1.76
C19orf54-201ENST00000378313 SPRR2AP35326 72 aa4.04□□□□□ -1.76
C19orf54-201ENST00000378313 NEBP20929 6669 aa4□□□□□ -1.77
C19orf54-201ENST00000378313 SPRR2DP22532 72 aa3.86□□□□□ -1.79
C19orf54-201ENST00000378313 OBSCNQ5VST9 7968 aa3.86□□□□□ -1.79
C19orf54-201ENST00000378313 LCE1EQ5T753 118 aa3.81□□□□□ -1.8
C19orf54-201ENST00000378313 KRTAP20-1Q3LI63 56 aa3.7□□□□□ -1.82
C19orf54-201ENST00000378313 LCE1DQ5T752 114 aa3.69□□□□□ -1.82
C19orf54-201ENST00000378313 KRTAP5-4Q6L8H1 288 aa3.69□□□□□ -1.82
C19orf54-201ENST00000378313 MT4P47944 62 aa3.54□□□□□ -1.84
C19orf54-201ENST00000378313 KRTAP5-2Q701N4 177 aa3.53□□□□□ -1.84
C19orf54-201ENST00000378313 HMCN1Q96RW7 5635 aa3.52□□□□□ -1.85
C19orf54-201ENST00000378313 KRTAP4-6Q9BYQ5 205 aa3.47□□□□□ -1.85
C19orf54-201ENST00000378313 MUC5ACP98088 5654 aa3.44□□□□□ -1.86
C19orf54-201ENST00000378313 KRTAP20-2Q3LI61 65 aa3.43□□□□□ -1.86
C19orf54-201ENST00000378313 KRTAP4-11Q9BYQ6 195 aa3.39□□□□□ -1.87
C19orf54-201ENST00000378313 LCE4AQ5TA78 99 aa3.36□□□□□ -1.87
C19orf54-201ENST00000378313 KRTAP5-10Q6L8G5 202 aa3.35□□□□□ -1.87
C19orf54-201ENST00000378313 KRTAP5-1Q6L8H4 278 aa3.29□□□□□ -1.88
C19orf54-201ENST00000378313 KRTAP5-3Q6L8H2 238 aa3.26□□□□□ -1.89
C19orf54-201ENST00000378313 LCE1BQ5T7P3 118 aa3.18□□□□□ -1.9
C19orf54-201ENST00000378313 LCE1CQ5T751 118 aa3.09□□□□□ -1.92
C19orf54-201ENST00000378313 KRTAP4-2Q9BYR5 136 aa3.07□□□□□ -1.92
C19orf54-201ENST00000378313 AHNAK2Q8IVF2 5795 aa3.05□□□□□ -1.92
C19orf54-201ENST00000378313 LCE1FQ5T754 118 aa3□□□□□ -1.93
C19orf54-201ENST00000378313 KRTAP21-1Q3LI58 79 aa2.97□□□□□ -1.93
C19orf54-201ENST00000378313 KRTAP21-2Q3LI59 83 aa2.97□□□□□ -1.93
C19orf54-201ENST00000378313 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.97□□□□□ -1.93
C19orf54-201ENST00000378313 GPR98Q8WXG9 6306 aa2.93□□□□□ -1.94
C19orf54-201ENST00000378313 KRTAP5-7Q6L8G8 165 aa2.8□□□□□ -1.96
C19orf54-201ENST00000378313 MUC5BQ9HC84 5762 aaPredicted RBP2.76□□□□□ -1.97
C19orf54-201ENST00000378313 KRTAP5-8O75690 187 aa2.72□□□□□ -1.97
C19orf54-201ENST00000378313 KRTAP4-4Q9BYR3 166 aa2.64□□□□□ -1.99
C19orf54-201ENST00000378313 KRTAP5-11Q6L8G4 156 aa2.61□□□□□ -1.99
C19orf54-201ENST00000378313 MUC19Q7Z5P9 8384 aa2.61□□□□□ -1.99
C19orf54-201ENST00000378313 KRTAP9-9Q9BYP9 154 aa2.46□□□□□ -2.02
C19orf54-201ENST00000378313 KRTAP4-12Q9BQ66 201 aa2.43□□□□□ -2.02
C19orf54-201ENST00000378313 AHNAKQ09666 5890 aaKnown RBP2.34□□□□□ -2.04
C19orf54-201ENST00000378313 PHGR1C9JFL3 82 aa2.26□□□□□ -2.05
C19orf54-201ENST00000378313 MUC16Q8WXI7 14507 aa1.55□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 127 ms