RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 KRTAP9-6A0A140TA67 174 aa5.9□□□□□ -1.47
GNE-201ENST00000377902 FCGBPQ9Y6R7 5405 aaPredicted RBP5.9□□□□□ -1.47
GNE-201ENST00000377902 MUC12Q9UKN1 5478 aa5.89□□□□□ -1.47
GNE-201ENST00000377902 KRTAP19-4Q3LI73 84 aa5.88□□□□□ -1.47
GNE-201ENST00000377902 MT1GP13640 62 aa5.86□□□□□ -1.47
GNE-201ENST00000377902 KRTAP9-2Q9BYQ4 174 aa5.82□□□□□ -1.48
GNE-201ENST00000377902 CRCT1Q9UGL9 99 aa5.81□□□□□ -1.48
GNE-201ENST00000377902 LCE2DQ5TA82 110 aaPredicted RBP5.79□□□□□ -1.48
GNE-201ENST00000377902 DSTQ03001 7570 aaKnown RBP5.78□□□□□ -1.48
GNE-201ENST00000377902 KRTAP19-6Q3LI70 58 aa5.74□□□□□ -1.49
GNE-201ENST00000377902 MT1MQ8N339 61 aa5.7□□□□□ -1.5
GNE-201ENST00000377902 KRTAP19-3Q7Z4W3 81 aa5.64□□□□□ -1.51
GNE-201ENST00000377902 KRTAP12-4P60329 112 aa5.63□□□□□ -1.51
GNE-201ENST00000377902 MACF1Q9UPN3 7388 aaKnown RBP5.52□□□□□ -1.53
GNE-201ENST00000377902 KRTAP4-9Q9BYQ8 210 aa5.49□□□□□ -1.53
GNE-201ENST00000377902 SYNE2Q8WXH0 6885 aaKnown RBP5.49□□□□□ -1.53
GNE-201ENST00000377902 LCE3BQ5TA77 95 aa5.48□□□□□ -1.53
GNE-201ENST00000377902 LCE5AQ5TCM9 118 aa5.43□□□□□ -1.54
GNE-201ENST00000377902 SPRR2FQ96RM1 72 aa5.42□□□□□ -1.54
GNE-201ENST00000377902 SYNE1Q8NF91 8797 aaKnown RBP5.4□□□□□ -1.55
GNE-201ENST00000377902 MDN1Q9NU22 5596 aa5.29□□□□□ -1.56
GNE-201ENST00000377902 KRTAP6-1Q3LI64 71 aa5.28□□□□□ -1.56
GNE-201ENST00000377902 KRTAP9-7A8MTY7 169 aa5.2□□□□□ -1.58
GNE-201ENST00000377902 MT1AP04731 61 aa5.16□□□□□ -1.58
GNE-201ENST00000377902 LCE3DQ9BYE3 92 aa5.13□□□□□ -1.59
GNE-201ENST00000377902 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.1□□□□□ -1.59
GNE-201ENST00000377902 KRTAP5-5Q701N2 237 aaPredicted RBP5.07□□□□□ -1.6
GNE-201ENST00000377902 LCE3EQ5T5B0 92 aa5.06□□□□□ -1.6
GNE-201ENST00000377902 PRM1P04553 51 aa5.02□□□□□ -1.61
GNE-201ENST00000377902 OBSCNQ5VST9 7968 aa5.02□□□□□ -1.61
GNE-201ENST00000377902 LCE1AQ5T7P2 110 aa4.97□□□□□ -1.61
GNE-201ENST00000377902 KRTAP5-9P26371 169 aa4.83□□□□□ -1.64
GNE-201ENST00000377902 SPRR2EP22531 72 aa4.83□□□□□ -1.64
GNE-201ENST00000377902 SPRR2BP35325 72 aa4.83□□□□□ -1.64
GNE-201ENST00000377902 SPRR2AP35326 72 aa4.83□□□□□ -1.64
GNE-201ENST00000377902 KRTAP6-2Q3LI66 62 aa4.81□□□□□ -1.64
GNE-201ENST00000377902 KRTAP9-4Q9BYQ2 154 aa4.8□□□□□ -1.64
GNE-201ENST00000377902 KRTAP6-3Q3LI67 103 aa4.75□□□□□ -1.65
GNE-201ENST00000377902 SPRR2DP22532 72 aa4.61□□□□□ -1.67
GNE-201ENST00000377902 KRTAP20-1Q3LI63 56 aa4.59□□□□□ -1.67
GNE-201ENST00000377902 MT3P25713 68 aa4.56□□□□□ -1.68
GNE-201ENST00000377902 NEBP20929 6669 aa4.5□□□□□ -1.69
GNE-201ENST00000377902 KRTAP2-2Q9BYT5 123 aa4.39□□□□□ -1.71
GNE-201ENST00000377902 KRTAP4-6Q9BYQ5 205 aa4.23□□□□□ -1.73
GNE-201ENST00000377902 KRTAP5-4Q6L8H1 288 aa4.21□□□□□ -1.73
GNE-201ENST00000377902 MT4P47944 62 aa4.17□□□□□ -1.74
GNE-201ENST00000377902 HMCN1Q96RW7 5635 aa4.11□□□□□ -1.75
GNE-201ENST00000377902 GPR98Q8WXG9 6306 aa4.07□□□□□ -1.76
GNE-201ENST00000377902 KRTAP20-2Q3LI61 65 aa4.02□□□□□ -1.77
GNE-201ENST00000377902 MUC5ACP98088 5654 aa4□□□□□ -1.77
GNE-201ENST00000377902 KRTAP5-2Q701N4 177 aa3.98□□□□□ -1.77
GNE-201ENST00000377902 LCE1DQ5T752 114 aa3.93□□□□□ -1.78
GNE-201ENST00000377902 LCE4AQ5TA78 99 aa3.88□□□□□ -1.79
GNE-201ENST00000377902 KRTAP4-11Q9BYQ6 195 aa3.82□□□□□ -1.8
GNE-201ENST00000377902 LCE1BQ5T7P3 118 aa3.79□□□□□ -1.8
GNE-201ENST00000377902 KRTAP5-3Q6L8H2 238 aa3.79□□□□□ -1.8
GNE-201ENST00000377902 LCE1EQ5T753 118 aa3.73□□□□□ -1.81
GNE-201ENST00000377902 KRTAP5-10Q6L8G5 202 aa3.73□□□□□ -1.81
GNE-201ENST00000377902 KRTAP5-7Q6L8G8 165 aa3.68□□□□□ -1.82
GNE-201ENST00000377902 KRTAP5-1Q6L8H4 278 aa3.6□□□□□ -1.83
GNE-201ENST00000377902 AHNAK2Q8IVF2 5795 aa3.54□□□□□ -1.84
GNE-201ENST00000377902 KRTAP4-2Q9BYR5 136 aa3.53□□□□□ -1.85
GNE-201ENST00000377902 LCE1CQ5T751 118 aa3.45□□□□□ -1.86
GNE-201ENST00000377902 AHNAKQ09666 5890 aaKnown RBP3.38□□□□□ -1.87
GNE-201ENST00000377902 LCE1FQ5T754 118 aa3.37□□□□□ -1.87
GNE-201ENST00000377902 KRTAP21-2Q3LI59 83 aa3.37□□□□□ -1.87
GNE-201ENST00000377902 MUC5BQ9HC84 5762 aaPredicted RBP3.32□□□□□ -1.88
GNE-201ENST00000377902 KRTAP4-4Q9BYR3 166 aa3.23□□□□□ -1.89
GNE-201ENST00000377902 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.22□□□□□ -1.89
GNE-201ENST00000377902 MUC19Q7Z5P9 8384 aa3.22□□□□□ -1.89
GNE-201ENST00000377902 KRTAP5-8O75690 187 aa3.19□□□□□ -1.9
GNE-201ENST00000377902 KRTAP21-1Q3LI58 79 aa3.1□□□□□ -1.91
GNE-201ENST00000377902 KRTAP9-9Q9BYP9 154 aa3.1□□□□□ -1.91
GNE-201ENST00000377902 KRTAP4-12Q9BQ66 201 aa2.95□□□□□ -1.94
GNE-201ENST00000377902 KRTAP5-11Q6L8G4 156 aa2.92□□□□□ -1.94
GNE-201ENST00000377902 PHGR1C9JFL3 82 aa2.56□□□□□ -2
GNE-201ENST00000377902 MUC16Q8WXI7 14507 aa1.77□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 103.7 ms