RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 KRTAP9-2Q9BYQ4 174 aa5.13□□□□□ -1.59
CSNK1A1-202ENST00000377843 LOC100996750A0A140TA64 210 aa5.1□□□□□ -1.59
CSNK1A1-202ENST00000377843 MT1EP04732 61 aa5.1□□□□□ -1.59
CSNK1A1-202ENST00000377843 KRTAP12-4P60329 112 aa5.1□□□□□ -1.59
CSNK1A1-202ENST00000377843 MACF1Q9UPN3 7388 aaKnown RBP5.1□□□□□ -1.59
CSNK1A1-202ENST00000377843 MUC12Q9UKN1 5478 aa5.1□□□□□ -1.59
CSNK1A1-202ENST00000377843 SYNE2Q8WXH0 6885 aaKnown RBP5.04□□□□□ -1.6
CSNK1A1-202ENST00000377843 KRTAP19-4Q3LI73 84 aa5.03□□□□□ -1.6
CSNK1A1-202ENST00000377843 KRTAP4-3Q9BYR4 195 aa5.02□□□□□ -1.61
CSNK1A1-202ENST00000377843 MT1GP13640 62 aa4.95□□□□□ -1.62
CSNK1A1-202ENST00000377843 CRCT1Q9UGL9 99 aa4.93□□□□□ -1.62
CSNK1A1-202ENST00000377843 DSTQ03001 7570 aaKnown RBP4.9□□□□□ -1.63
CSNK1A1-202ENST00000377843 MDN1Q9NU22 5596 aa4.87□□□□□ -1.63
CSNK1A1-202ENST00000377843 SPRR2FQ96RM1 72 aa4.8□□□□□ -1.64
CSNK1A1-202ENST00000377843 KRTAP4-9Q9BYQ8 210 aa4.79□□□□□ -1.64
CSNK1A1-202ENST00000377843 MT1MQ8N339 61 aa4.73□□□□□ -1.65
CSNK1A1-202ENST00000377843 LCE3BQ5TA77 95 aa4.71□□□□□ -1.66
CSNK1A1-202ENST00000377843 KRTAP9-7A8MTY7 169 aa4.66□□□□□ -1.66
CSNK1A1-202ENST00000377843 KRTAP19-3Q7Z4W3 81 aa4.65□□□□□ -1.67
CSNK1A1-202ENST00000377843 KRTAP9-6A0A140TA67 174 aa4.61□□□□□ -1.67
CSNK1A1-202ENST00000377843 KRTAP5-5Q701N2 237 aaPredicted RBP4.61□□□□□ -1.67
CSNK1A1-202ENST00000377843 PRM1P04553 51 aa4.6□□□□□ -1.67
CSNK1A1-202ENST00000377843 SYNE1Q8NF91 8797 aaKnown RBP4.6□□□□□ -1.67
CSNK1A1-202ENST00000377843 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.56□□□□□ -1.68
CSNK1A1-202ENST00000377843 MT1AP04731 61 aa4.55□□□□□ -1.68
CSNK1A1-202ENST00000377843 LCE5AQ5TCM9 118 aa4.55□□□□□ -1.68
CSNK1A1-202ENST00000377843 KRTAP5-9P26371 169 aa4.51□□□□□ -1.69
CSNK1A1-202ENST00000377843 LCE3DQ9BYE3 92 aa4.51□□□□□ -1.69
CSNK1A1-202ENST00000377843 LCE1AQ5T7P2 110 aa4.5□□□□□ -1.69
CSNK1A1-202ENST00000377843 LCE3EQ5T5B0 92 aa4.49□□□□□ -1.69
CSNK1A1-202ENST00000377843 SPRR2EP22531 72 aa4.48□□□□□ -1.69
CSNK1A1-202ENST00000377843 SPRR2BP35325 72 aa4.48□□□□□ -1.69
CSNK1A1-202ENST00000377843 SPRR2AP35326 72 aa4.48□□□□□ -1.69
CSNK1A1-202ENST00000377843 KRTAP6-1Q3LI64 71 aa4.46□□□□□ -1.7
CSNK1A1-202ENST00000377843 KRTAP6-3Q3LI67 103 aa4.41□□□□□ -1.7
CSNK1A1-202ENST00000377843 KRTAP6-2Q3LI66 62 aa4.31□□□□□ -1.72
CSNK1A1-202ENST00000377843 SPRR2DP22532 72 aa4.28□□□□□ -1.72
CSNK1A1-202ENST00000377843 NEBP20929 6669 aa4.21□□□□□ -1.74
CSNK1A1-202ENST00000377843 KRTAP2-2Q9BYT5 123 aa4.19□□□□□ -1.74
CSNK1A1-202ENST00000377843 OBSCNQ5VST9 7968 aa4.14□□□□□ -1.75
CSNK1A1-202ENST00000377843 KRTAP9-4Q9BYQ2 154 aa4□□□□□ -1.77
CSNK1A1-202ENST00000377843 LCE1EQ5T753 118 aa3.92□□□□□ -1.78
CSNK1A1-202ENST00000377843 MT4P47944 62 aa3.87□□□□□ -1.79
CSNK1A1-202ENST00000377843 KRTAP4-6Q9BYQ5 205 aa3.83□□□□□ -1.8
CSNK1A1-202ENST00000377843 MT3P25713 68 aa3.79□□□□□ -1.8
CSNK1A1-202ENST00000377843 HMCN1Q96RW7 5635 aa3.79□□□□□ -1.8
CSNK1A1-202ENST00000377843 LCE1DQ5T752 114 aa3.78□□□□□ -1.8
CSNK1A1-202ENST00000377843 KRTAP5-4Q6L8H1 288 aa3.78□□□□□ -1.8
CSNK1A1-202ENST00000377843 KRTAP20-1Q3LI63 56 aa3.73□□□□□ -1.81
CSNK1A1-202ENST00000377843 KRTAP20-2Q3LI61 65 aa3.62□□□□□ -1.83
CSNK1A1-202ENST00000377843 LCE4AQ5TA78 99 aa3.62□□□□□ -1.83
CSNK1A1-202ENST00000377843 KRTAP4-11Q9BYQ6 195 aa3.47□□□□□ -1.85
CSNK1A1-202ENST00000377843 KRTAP5-3Q6L8H2 238 aa3.45□□□□□ -1.86
CSNK1A1-202ENST00000377843 KRTAP5-2Q701N4 177 aa3.44□□□□□ -1.86
CSNK1A1-202ENST00000377843 MUC5ACP98088 5654 aa3.43□□□□□ -1.86
CSNK1A1-202ENST00000377843 KRTAP5-10Q6L8G5 202 aa3.27□□□□□ -1.89
CSNK1A1-202ENST00000377843 AHNAK2Q8IVF2 5795 aa3.18□□□□□ -1.9
CSNK1A1-202ENST00000377843 LCE1BQ5T7P3 118 aa3.13□□□□□ -1.91
CSNK1A1-202ENST00000377843 KRTAP5-1Q6L8H4 278 aa3.12□□□□□ -1.91
CSNK1A1-202ENST00000377843 LCE1FQ5T754 118 aa3.1□□□□□ -1.91
CSNK1A1-202ENST00000377843 KRTAP4-12Q9BQ66 201 aa3.04□□□□□ -1.92
CSNK1A1-202ENST00000377843 KRTAP5-8O75690 187 aa2.99□□□□□ -1.93
CSNK1A1-202ENST00000377843 KRTAP9-9Q9BYP9 154 aa2.99□□□□□ -1.93
CSNK1A1-202ENST00000377843 MUC19Q7Z5P9 8384 aa2.97□□□□□ -1.93
CSNK1A1-202ENST00000377843 KRTAP4-2Q9BYR5 136 aa2.96□□□□□ -1.94
CSNK1A1-202ENST00000377843 KRTAP21-1Q3LI58 79 aa2.92□□□□□ -1.94
CSNK1A1-202ENST00000377843 MUC5BQ9HC84 5762 aaPredicted RBP2.9□□□□□ -1.95
CSNK1A1-202ENST00000377843 GPR98Q8WXG9 6306 aa2.88□□□□□ -1.95
CSNK1A1-202ENST00000377843 LCE1CQ5T751 118 aa2.86□□□□□ -1.95
CSNK1A1-202ENST00000377843 KRTAP21-2Q3LI59 83 aa2.84□□□□□ -1.95
CSNK1A1-202ENST00000377843 KRTAP5-7Q6L8G8 165 aa2.75□□□□□ -1.97
CSNK1A1-202ENST00000377843 KRTAP4-4Q9BYR3 166 aa2.7□□□□□ -1.98
CSNK1A1-202ENST00000377843 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.66□□□□□ -1.98
CSNK1A1-202ENST00000377843 KRTAP5-11Q6L8G4 156 aa2.5□□□□□ -2.01
CSNK1A1-202ENST00000377843 AHNAKQ09666 5890 aaKnown RBP2.33□□□□□ -2.04
CSNK1A1-202ENST00000377843 PHGR1C9JFL3 82 aa2.18□□□□□ -2.06
CSNK1A1-202ENST00000377843 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 22.7 ms