RNA–Protein interactions for RNA: ENST00000377115.4

FOXA2-201, Transcript of forkhead box A2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXA2, Length 2,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2-201ENST00000377115 MT1GP13640 62 aa7.4□□□□□ -1.22
FOXA2-201ENST00000377115 FCGBPQ9Y6R7 5405 aaPredicted RBP7.31□□□□□ -1.24
FOXA2-201ENST00000377115 CRCT1Q9UGL9 99 aa7.29□□□□□ -1.24
FOXA2-201ENST00000377115 MUC12Q9UKN1 5478 aa7.29□□□□□ -1.24
FOXA2-201ENST00000377115 LCE2DQ5TA82 110 aaPredicted RBP7.27□□□□□ -1.25
FOXA2-201ENST00000377115 KRTAP12-4P60329 112 aa7.27□□□□□ -1.25
FOXA2-201ENST00000377115 FSIP2Q5CZC0 6907 aa7.26□□□□□ -1.25
FOXA2-201ENST00000377115 MT1MQ8N339 61 aa7.23□□□□□ -1.25
FOXA2-201ENST00000377115 KRTAP19-6Q3LI70 58 aa7.2□□□□□ -1.26
FOXA2-201ENST00000377115 KRTAP19-3Q7Z4W3 81 aa7.16□□□□□ -1.26
FOXA2-201ENST00000377115 DSTQ03001 7570 aaKnown RBP7.08□□□□□ -1.28
FOXA2-201ENST00000377115 LCE3BQ5TA77 95 aa6.96□□□□□ -1.3
FOXA2-201ENST00000377115 KRTAP4-9Q9BYQ8 210 aa6.93□□□□□ -1.3
FOXA2-201ENST00000377115 LCE5AQ5TCM9 118 aa6.86□□□□□ -1.31
FOXA2-201ENST00000377115 SYNE1Q8NF91 8797 aaKnown RBP6.79□□□□□ -1.32
FOXA2-201ENST00000377115 SPRR2FQ96RM1 72 aa6.75□□□□□ -1.33
FOXA2-201ENST00000377115 MT1AP04731 61 aa6.7□□□□□ -1.34
FOXA2-201ENST00000377115 KRTAP9-2Q9BYQ4 174 aa6.7□□□□□ -1.34
FOXA2-201ENST00000377115 KRTAP6-1Q3LI64 71 aa6.69□□□□□ -1.34
FOXA2-201ENST00000377115 LCE3DQ9BYE3 92 aa6.6□□□□□ -1.35
FOXA2-201ENST00000377115 KRTAP9-7A8MTY7 169 aa6.57□□□□□ -1.36
FOXA2-201ENST00000377115 LCE3EQ5T5B0 92 aa6.54□□□□□ -1.36
FOXA2-201ENST00000377115 KRTAP5-5Q701N2 237 aaPredicted RBP6.54□□□□□ -1.36
FOXA2-201ENST00000377115 MACF1Q9UPN3 7388 aaKnown RBP6.53□□□□□ -1.36
FOXA2-201ENST00000377115 PRM1P04553 51 aa6.5□□□□□ -1.37
FOXA2-201ENST00000377115 SYNE2Q8WXH0 6885 aaKnown RBP6.45□□□□□ -1.38
FOXA2-201ENST00000377115 MDN1Q9NU22 5596 aa6.41□□□□□ -1.38
FOXA2-201ENST00000377115 KRTAP6-2Q3LI66 62 aa6.19□□□□□ -1.42
FOXA2-201ENST00000377115 LCE1AQ5T7P2 110 aa6.19□□□□□ -1.42
FOXA2-201ENST00000377115 KRTAP9-4Q9BYQ2 154 aa6.11□□□□□ -1.43
FOXA2-201ENST00000377115 OBSCNQ5VST9 7968 aa6.06□□□□□ -1.44
FOXA2-201ENST00000377115 KRTAP5-9P26371 169 aa5.99□□□□□ -1.45
FOXA2-201ENST00000377115 SPRR2EP22531 72 aa5.99□□□□□ -1.45
FOXA2-201ENST00000377115 SPRR2BP35325 72 aa5.99□□□□□ -1.45
FOXA2-201ENST00000377115 SPRR2AP35326 72 aa5.99□□□□□ -1.45
FOXA2-201ENST00000377115 KRTAP9-6A0A140TA67 174 aa5.93□□□□□ -1.46
FOXA2-201ENST00000377115 MT3P25713 68 aa5.82□□□□□ -1.48
FOXA2-201ENST00000377115 KRTAP6-3Q3LI67 103 aa5.81□□□□□ -1.48
FOXA2-201ENST00000377115 KRTAP2-2Q9BYT5 123 aa5.74□□□□□ -1.49
FOXA2-201ENST00000377115 SPRR2DP22532 72 aa5.69□□□□□ -1.5
FOXA2-201ENST00000377115 KRTAP5-4Q6L8H1 288 aa5.31□□□□□ -1.56
FOXA2-201ENST00000377115 KRTAP4-6Q9BYQ5 205 aa5.22□□□□□ -1.57
FOXA2-201ENST00000377115 MT4P47944 62 aa5.11□□□□□ -1.59
FOXA2-201ENST00000377115 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.11□□□□□ -1.59
FOXA2-201ENST00000377115 MUC5ACP98088 5654 aa5.09□□□□□ -1.59
FOXA2-201ENST00000377115 KRTAP5-2Q701N4 177 aa5.05□□□□□ -1.6
FOXA2-201ENST00000377115 KRTAP20-2Q3LI61 65 aa5.03□□□□□ -1.6
FOXA2-201ENST00000377115 LCE1EQ5T753 118 aa4.94□□□□□ -1.62
FOXA2-201ENST00000377115 LCE1DQ5T752 114 aa4.89□□□□□ -1.63
FOXA2-201ENST00000377115 KRTAP4-11Q9BYQ6 195 aa4.89□□□□□ -1.63
FOXA2-201ENST00000377115 NEBP20929 6669 aa4.88□□□□□ -1.63
FOXA2-201ENST00000377115 HMCN1Q96RW7 5635 aa4.86□□□□□ -1.63
FOXA2-201ENST00000377115 LCE4AQ5TA78 99 aa4.81□□□□□ -1.64
FOXA2-201ENST00000377115 KRTAP5-10Q6L8G5 202 aa4.8□□□□□ -1.64
FOXA2-201ENST00000377115 KRTAP5-3Q6L8H2 238 aa4.74□□□□□ -1.65
FOXA2-201ENST00000377115 LCE1BQ5T7P3 118 aa4.74□□□□□ -1.65
FOXA2-201ENST00000377115 KRTAP5-1Q6L8H4 278 aa4.64□□□□□ -1.67
FOXA2-201ENST00000377115 KRTAP20-1Q3LI63 56 aa4.55□□□□□ -1.68
FOXA2-201ENST00000377115 KRTAP4-2Q9BYR5 136 aa4.45□□□□□ -1.7
FOXA2-201ENST00000377115 LCE1CQ5T751 118 aa4.38□□□□□ -1.71
FOXA2-201ENST00000377115 KRTAP21-2Q3LI59 83 aa4.28□□□□□ -1.72
FOXA2-201ENST00000377115 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.15□□□□□ -1.75
FOXA2-201ENST00000377115 KRTAP21-1Q3LI58 79 aa4.09□□□□□ -1.76
FOXA2-201ENST00000377115 KRTAP4-4Q9BYR3 166 aa4.01□□□□□ -1.77
FOXA2-201ENST00000377115 MUC19Q7Z5P9 8384 aa3.99□□□□□ -1.77
FOXA2-201ENST00000377115 KRTAP5-8O75690 187 aa3.84□□□□□ -1.79
FOXA2-201ENST00000377115 KRTAP5-7Q6L8G8 165 aa3.79□□□□□ -1.8
FOXA2-201ENST00000377115 KRTAP5-11Q6L8G4 156 aa3.72□□□□□ -1.81
FOXA2-201ENST00000377115 AHNAK2Q8IVF2 5795 aa3.66□□□□□ -1.82
FOXA2-201ENST00000377115 MUC5BQ9HC84 5762 aaPredicted RBP3.65□□□□□ -1.83
FOXA2-201ENST00000377115 KRTAP4-12Q9BQ66 201 aa3.6□□□□□ -1.83
FOXA2-201ENST00000377115 LCE1FQ5T754 118 aa3.52□□□□□ -1.85
FOXA2-201ENST00000377115 PHGR1C9JFL3 82 aa3.24□□□□□ -1.89
FOXA2-201ENST00000377115 GPR98Q8WXG9 6306 aa3.22□□□□□ -1.89
FOXA2-201ENST00000377115 KRTAP9-9Q9BYP9 154 aa3.08□□□□□ -1.92
FOXA2-201ENST00000377115 AHNAKQ09666 5890 aaKnown RBP2.63□□□□□ -1.99
FOXA2-201ENST00000377115 MUC16Q8WXI7 14507 aa2.25□□□□□ -2.05
Retrieved 77 of 20,778 RNA–protein pairs in 5.8 ms