RNA–Protein interactions for RNA: ENST00000376618.6

CPT1A-202, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 1 (best) BASIC

Gene CPT1A, Length 2,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-202ENST00000376618 DSTQ03001 7570 aaKnown RBP5.07□□□□□ -1.6
CPT1A-202ENST00000376618 LCE3CQ5T5A8 94 aa5.06□□□□□ -1.6
CPT1A-202ENST00000376618 KRTAP9-6A8MVA2 160 aa5.04□□□□□ -1.6
CPT1A-202ENST00000376618 MT1EP04732 61 aa4.89□□□□□ -1.63
CPT1A-202ENST00000376618 MACF1Q9UPN3 7388 aaKnown RBP4.88□□□□□ -1.63
CPT1A-202ENST00000376618 KRTAP4-3Q9BYR4 195 aa4.88□□□□□ -1.63
CPT1A-202ENST00000376618 MT1LQ93083 61 aa4.87□□□□□ -1.63
CPT1A-202ENST00000376618 SYNE2Q8WXH0 6885 aaKnown RBP4.86□□□□□ -1.63
CPT1A-202ENST00000376618 KRTAP19-6Q3LI70 58 aa4.85□□□□□ -1.63
CPT1A-202ENST00000376618 LCE1FQ5T754 118 aa4.85□□□□□ -1.63
CPT1A-202ENST00000376618 LOC100996750A0A140TA64 210 aa4.82□□□□□ -1.64
CPT1A-202ENST00000376618 CRCT1Q9UGL9 99 aa4.74□□□□□ -1.65
CPT1A-202ENST00000376618 MDN1Q9NU22 5596 aa4.72□□□□□ -1.65
CPT1A-202ENST00000376618 LCE1AQ5T7P2 110 aa4.7□□□□□ -1.66
CPT1A-202ENST00000376618 MT1GP13640 62 aa4.69□□□□□ -1.66
CPT1A-202ENST00000376618 SYNE1Q8NF91 8797 aaKnown RBP4.64□□□□□ -1.67
CPT1A-202ENST00000376618 SPRR2FQ96RM1 72 aa4.61□□□□□ -1.67
CPT1A-202ENST00000376618 INE1O15225 51 aa4.59□□□□□ -1.67
CPT1A-202ENST00000376618 MT1MQ8N339 61 aa4.59□□□□□ -1.68
CPT1A-202ENST00000376618 KRTAP2-3P0C7H8 128 aa4.58□□□□□ -1.68
CPT1A-202ENST00000376618 KRTAP19-3Q7Z4W3 81 aa4.58□□□□□ -1.68
CPT1A-202ENST00000376618 KRTAP2-4Q9BYR9 128 aa4.58□□□□□ -1.68
CPT1A-202ENST00000376618 KRTAP2-1Q9BYU5 128 aa4.58□□□□□ -1.68
CPT1A-202ENST00000376618 KRTAP9-2Q9BYQ4 174 aa4.57□□□□□ -1.68
CPT1A-202ENST00000376618 KRTAP4-12Q9BQ66 201 aa4.54□□□□□ -1.68
CPT1A-202ENST00000376618 KRTAP2-2Q9BYT5 123 aa4.53□□□□□ -1.68
CPT1A-202ENST00000376618 OBSCNQ5VST9 7968 aa4.49□□□□□ -1.69
CPT1A-202ENST00000376618 KRTAP4-9Q9BYQ8 210 aa4.32□□□□□ -1.72
CPT1A-202ENST00000376618 MT3P25713 68 aa4.32□□□□□ -1.72
CPT1A-202ENST00000376618 LCE3BQ5TA77 95 aa4.31□□□□□ -1.72
CPT1A-202ENST00000376618 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.3□□□□□ -1.72
CPT1A-202ENST00000376618 LCE3EQ5T5B0 92 aa4.25□□□□□ -1.73
CPT1A-202ENST00000376618 KRTAP6-1Q3LI64 71 aa4.22□□□□□ -1.73
CPT1A-202ENST00000376618 SPRR2EP22531 72 aa4.18□□□□□ -1.74
CPT1A-202ENST00000376618 SPRR2BP35325 72 aa4.18□□□□□ -1.74
CPT1A-202ENST00000376618 SPRR2AP35326 72 aa4.18□□□□□ -1.74
CPT1A-202ENST00000376618 KRTAP12-4P60329 112 aa4.16□□□□□ -1.74
CPT1A-202ENST00000376618 KRTAP5-9P26371 169 aa4.13□□□□□ -1.75
CPT1A-202ENST00000376618 KRTAP4-6Q9BYQ5 205 aa4.12□□□□□ -1.75
CPT1A-202ENST00000376618 LCE1EQ5T753 118 aa4.12□□□□□ -1.75
CPT1A-202ENST00000376618 KRTAP5-5Q701N2 237 aaPredicted RBP4.01□□□□□ -1.77
CPT1A-202ENST00000376618 MT1AP04731 61 aa4.01□□□□□ -1.77
CPT1A-202ENST00000376618 SPRR2DP22532 72 aa3.98□□□□□ -1.77
CPT1A-202ENST00000376618 KRTAP6-3Q3LI67 103 aa3.97□□□□□ -1.77
CPT1A-202ENST00000376618 LCE1DQ5T752 114 aa3.91□□□□□ -1.78
CPT1A-202ENST00000376618 LCE3DQ9BYE3 92 aa3.89□□□□□ -1.79
CPT1A-202ENST00000376618 KRTAP6-2Q3LI66 62 aa3.82□□□□□ -1.8
CPT1A-202ENST00000376618 NEBP20929 6669 aa3.75□□□□□ -1.81
CPT1A-202ENST00000376618 PRM1P04553 51 aa3.68□□□□□ -1.82
CPT1A-202ENST00000376618 KRTAP4-11Q9BYQ6 195 aa3.68□□□□□ -1.82
CPT1A-202ENST00000376618 MT4P47944 62 aa3.67□□□□□ -1.82
CPT1A-202ENST00000376618 HMCN1Q96RW7 5635 aa3.57□□□□□ -1.84
CPT1A-202ENST00000376618 KRTAP5-4Q6L8H1 288 aa3.53□□□□□ -1.84
CPT1A-202ENST00000376618 KRTAP20-1Q3LI63 56 aa3.47□□□□□ -1.85
CPT1A-202ENST00000376618 KRTAP20-2Q3LI61 65 aa3.41□□□□□ -1.86
CPT1A-202ENST00000376618 KRTAP4-2Q9BYR5 136 aa3.37□□□□□ -1.87
CPT1A-202ENST00000376618 KRTAP5-2Q701N4 177 aa3.27□□□□□ -1.89
CPT1A-202ENST00000376618 MUC5ACP98088 5654 aa3.24□□□□□ -1.89
CPT1A-202ENST00000376618 KRTAP5-3Q6L8H2 238 aa3.23□□□□□ -1.89
CPT1A-202ENST00000376618 LCE1BQ5T7P3 118 aa3.14□□□□□ -1.91
CPT1A-202ENST00000376618 GPR98Q8WXG9 6306 aa3.05□□□□□ -1.92
CPT1A-202ENST00000376618 KRTAP5-1Q6L8H4 278 aa2.89□□□□□ -1.95
CPT1A-202ENST00000376618 KRTAP5-10Q6L8G5 202 aa2.85□□□□□ -1.95
CPT1A-202ENST00000376618 AHNAK2Q8IVF2 5795 aa2.84□□□□□ -1.96
CPT1A-202ENST00000376618 MUC5BQ9HC84 5762 aaPredicted RBP2.8□□□□□ -1.96
CPT1A-202ENST00000376618 MUC19Q7Z5P9 8384 aa2.8□□□□□ -1.96
CPT1A-202ENST00000376618 LCE1CQ5T751 118 aa2.77□□□□□ -1.97
CPT1A-202ENST00000376618 KRTAP5-8O75690 187 aa2.73□□□□□ -1.97
CPT1A-202ENST00000376618 KRTAP4-4Q9BYR3 166 aa2.69□□□□□ -1.98
CPT1A-202ENST00000376618 KRTAP21-2Q3LI59 83 aa2.68□□□□□ -1.98
CPT1A-202ENST00000376618 KRTAP5-11Q6L8G4 156 aa2.63□□□□□ -1.99
CPT1A-202ENST00000376618 KRTAP5-7Q6L8G8 165 aa2.63□□□□□ -1.99
CPT1A-202ENST00000376618 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.54□□□□□ -2
CPT1A-202ENST00000376618 AHNAKQ09666 5890 aaKnown RBP2.49□□□□□ -2.01
CPT1A-202ENST00000376618 KRTAP21-1Q3LI58 79 aa2.17□□□□□ -2.06
CPT1A-202ENST00000376618 PHGR1C9JFL3 82 aa2.1□□□□□ -2.07
CPT1A-202ENST00000376618 MUC16Q8WXI7 14507 aa1.41□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 12.2 ms