RNA–Protein interactions for RNA: ENST00000376395.8

UBQLN1-202, Transcript of ubiquilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN1, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-202ENST00000376395 LOC100996750A0A140TA64 210 aa4.95□□□□□ -1.62
UBQLN1-202ENST00000376395 MT1EP04732 61 aa4.92□□□□□ -1.62
UBQLN1-202ENST00000376395 KRTAP12-4P60329 112 aa4.91□□□□□ -1.62
UBQLN1-202ENST00000376395 LCE3BQ5TA77 95 aa4.89□□□□□ -1.63
UBQLN1-202ENST00000376395 KRTAP19-4Q3LI73 84 aa4.88□□□□□ -1.63
UBQLN1-202ENST00000376395 LCE2AQ5TA79 106 aaPredicted RBP4.84□□□□□ -1.63
UBQLN1-202ENST00000376395 MUC12Q9UKN1 5478 aa4.8□□□□□ -1.64
UBQLN1-202ENST00000376395 SYNE2Q8WXH0 6885 aaKnown RBP4.73□□□□□ -1.65
UBQLN1-202ENST00000376395 KRTAP2-3P0C7H8 128 aa4.72□□□□□ -1.65
UBQLN1-202ENST00000376395 KRTAP2-4Q9BYR9 128 aa4.72□□□□□ -1.65
UBQLN1-202ENST00000376395 KRTAP2-1Q9BYU5 128 aa4.72□□□□□ -1.65
UBQLN1-202ENST00000376395 KRTAP19-3Q7Z4W3 81 aa4.71□□□□□ -1.65
UBQLN1-202ENST00000376395 MT1MQ8N339 61 aa4.66□□□□□ -1.66
UBQLN1-202ENST00000376395 SSPOA2VEC9 5147 aa4.64□□□□□ -1.67
UBQLN1-202ENST00000376395 KRTAP9-2Q9BYQ4 174 aa4.63□□□□□ -1.67
UBQLN1-202ENST00000376395 KRTAP4-9Q9BYQ8 210 aa4.62□□□□□ -1.67
UBQLN1-202ENST00000376395 LCE2DQ5TA82 110 aaPredicted RBP4.6□□□□□ -1.67
UBQLN1-202ENST00000376395 KRTAP9-6A0A140TA67 174 aa4.59□□□□□ -1.67
UBQLN1-202ENST00000376395 KRTAP19-6Q3LI70 58 aa4.58□□□□□ -1.68
UBQLN1-202ENST00000376395 LCE3DQ9BYE3 92 aa4.55□□□□□ -1.68
UBQLN1-202ENST00000376395 SPRR2EP22531 72 aa4.52□□□□□ -1.69
UBQLN1-202ENST00000376395 SPRR2BP35325 72 aa4.52□□□□□ -1.69
UBQLN1-202ENST00000376395 SPRR2AP35326 72 aa4.52□□□□□ -1.69
UBQLN1-202ENST00000376395 LCE3EQ5T5B0 92 aa4.47□□□□□ -1.69
UBQLN1-202ENST00000376395 MACF1Q9UPN3 7388 aaKnown RBP4.39□□□□□ -1.71
UBQLN1-202ENST00000376395 PRM1P04553 51 aa4.32□□□□□ -1.72
UBQLN1-202ENST00000376395 SPRR2DP22532 72 aa4.31□□□□□ -1.72
UBQLN1-202ENST00000376395 KRTAP6-1Q3LI64 71 aa4.29□□□□□ -1.72
UBQLN1-202ENST00000376395 LCE5AQ5TCM9 118 aa4.27□□□□□ -1.73
UBQLN1-202ENST00000376395 MT1AP04731 61 aa4.19□□□□□ -1.74
UBQLN1-202ENST00000376395 KRTAP9-7A8MTY7 169 aa4.18□□□□□ -1.74
UBQLN1-202ENST00000376395 MDN1Q9NU22 5596 aa4.16□□□□□ -1.74
UBQLN1-202ENST00000376395 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.09□□□□□ -1.76
UBQLN1-202ENST00000376395 MT3P25713 68 aa4.08□□□□□ -1.76
UBQLN1-202ENST00000376395 LCE1AQ5T7P2 110 aa4.05□□□□□ -1.76
UBQLN1-202ENST00000376395 KRTAP6-2Q3LI66 62 aa3.99□□□□□ -1.77
UBQLN1-202ENST00000376395 MT4P47944 62 aa3.97□□□□□ -1.77
UBQLN1-202ENST00000376395 KRTAP6-3Q3LI67 103 aa3.94□□□□□ -1.78
UBQLN1-202ENST00000376395 KRTAP9-4Q9BYQ2 154 aa3.88□□□□□ -1.79
UBQLN1-202ENST00000376395 LCE1DQ5T752 114 aa3.8□□□□□ -1.8
UBQLN1-202ENST00000376395 KRTAP5-5Q701N2 237 aaPredicted RBP3.77□□□□□ -1.81
UBQLN1-202ENST00000376395 LCE1BQ5T7P3 118 aa3.77□□□□□ -1.81
UBQLN1-202ENST00000376395 KRTAP20-1Q3LI63 56 aa3.72□□□□□ -1.81
UBQLN1-202ENST00000376395 MUC19Q7Z5P9 8384 aa3.65□□□□□ -1.83
UBQLN1-202ENST00000376395 KRTAP5-9P26371 169 aa3.65□□□□□ -1.83
UBQLN1-202ENST00000376395 KRTAP2-2Q9BYT5 123 aa3.57□□□□□ -1.84
UBQLN1-202ENST00000376395 KRTAP4-6Q9BYQ5 205 aa3.54□□□□□ -1.84
UBQLN1-202ENST00000376395 NEBP20929 6669 aa3.53□□□□□ -1.84
UBQLN1-202ENST00000376395 LCE4AQ5TA78 99 aa3.34□□□□□ -1.87
UBQLN1-202ENST00000376395 KRTAP4-11Q9BYQ6 195 aa3.31□□□□□ -1.88
UBQLN1-202ENST00000376395 KRTAP20-2Q3LI61 65 aa3.28□□□□□ -1.88
UBQLN1-202ENST00000376395 MUC5ACP98088 5654 aa3.23□□□□□ -1.89
UBQLN1-202ENST00000376395 HMCN1Q96RW7 5635 aa3.12□□□□□ -1.91
UBQLN1-202ENST00000376395 LCE1EQ5T753 118 aa3.09□□□□□ -1.92
UBQLN1-202ENST00000376395 KRTAP5-4Q6L8H1 288 aa3.06□□□□□ -1.92
UBQLN1-202ENST00000376395 GPR98Q8WXG9 6306 aa3.03□□□□□ -1.92
UBQLN1-202ENST00000376395 KRTAP4-4Q9BYR3 166 aa2.99□□□□□ -1.93
UBQLN1-202ENST00000376395 LCE1CQ5T751 118 aa2.85□□□□□ -1.95
UBQLN1-202ENST00000376395 LCE1FQ5T754 118 aa2.85□□□□□ -1.95
UBQLN1-202ENST00000376395 KRTAP5-2Q701N4 177 aa2.83□□□□□ -1.96
UBQLN1-202ENST00000376395 KRTAP5-10Q6L8G5 202 aa2.83□□□□□ -1.96
UBQLN1-202ENST00000376395 KRTAP4-12Q9BQ66 201 aa2.8□□□□□ -1.96
UBQLN1-202ENST00000376395 KRTAP4-2Q9BYR5 136 aa2.8□□□□□ -1.96
UBQLN1-202ENST00000376395 KRTAP5-3Q6L8H2 238 aa2.78□□□□□ -1.97
UBQLN1-202ENST00000376395 KRTAP5-7Q6L8G8 165 aa2.74□□□□□ -1.97
UBQLN1-202ENST00000376395 AHNAK2Q8IVF2 5795 aa2.69□□□□□ -1.98
UBQLN1-202ENST00000376395 KRTAP9-9Q9BYP9 154 aa2.61□□□□□ -1.99
UBQLN1-202ENST00000376395 MUC5BQ9HC84 5762 aaPredicted RBP2.59□□□□□ -2
UBQLN1-202ENST00000376395 KRTAP5-1Q6L8H4 278 aa2.53□□□□□ -2.01
UBQLN1-202ENST00000376395 KRTAP21-2Q3LI59 83 aa2.5□□□□□ -2.01
UBQLN1-202ENST00000376395 KRTAP5-8O75690 187 aa2.45□□□□□ -2.02
UBQLN1-202ENST00000376395 AHNAKQ09666 5890 aaKnown RBP2.45□□□□□ -2.02
UBQLN1-202ENST00000376395 KRTAP21-1Q3LI58 79 aa2.22□□□□□ -2.05
UBQLN1-202ENST00000376395 KRTAP5-11Q6L8G4 156 aa2.22□□□□□ -2.05
UBQLN1-202ENST00000376395 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.22□□□□□ -2.05
UBQLN1-202ENST00000376395 PHGR1C9JFL3 82 aa1.94□□□□□ -2.1
UBQLN1-202ENST00000376395 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 8.3 ms