RNA–Protein interactions for RNA: ENST00000376285.5

PCCA-202, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCCA, Length 2,494 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-202ENST00000376285 MUC12Q9UKN1 5478 aa6.19□□□□□ -1.42
PCCA-202ENST00000376285 MACF1Q9UPN3 7388 aaKnown RBP6.18□□□□□ -1.42
PCCA-202ENST00000376285 CRCT1Q9UGL9 99 aa6.15□□□□□ -1.42
PCCA-202ENST00000376285 KRTAP19-3Q7Z4W3 81 aa6.14□□□□□ -1.43
PCCA-202ENST00000376285 KRTAP2-3P0C7H8 128 aa6.11□□□□□ -1.43
PCCA-202ENST00000376285 KRTAP2-4Q9BYR9 128 aa6.11□□□□□ -1.43
PCCA-202ENST00000376285 KRTAP2-1Q9BYU5 128 aa6.11□□□□□ -1.43
PCCA-202ENST00000376285 SPRR2FQ96RM1 72 aa6.11□□□□□ -1.43
PCCA-202ENST00000376285 MT1GP13640 62 aa6.09□□□□□ -1.43
PCCA-202ENST00000376285 MT1MQ8N339 61 aa6.07□□□□□ -1.44
PCCA-202ENST00000376285 KRTAP4-3Q9BYR4 195 aa6.04□□□□□ -1.44
PCCA-202ENST00000376285 LCE5AQ5TCM9 118 aa6□□□□□ -1.45
PCCA-202ENST00000376285 LOC100996750A0A140TA64 210 aa5.98□□□□□ -1.45
PCCA-202ENST00000376285 SYNE2Q8WXH0 6885 aaKnown RBP5.96□□□□□ -1.45
PCCA-202ENST00000376285 KRTAP5-9P26371 169 aa5.91□□□□□ -1.46
PCCA-202ENST00000376285 DSTQ03001 7570 aaKnown RBP5.81□□□□□ -1.48
PCCA-202ENST00000376285 LCE1AQ5T7P2 110 aa5.8□□□□□ -1.48
PCCA-202ENST00000376285 MDN1Q9NU22 5596 aa5.79□□□□□ -1.48
PCCA-202ENST00000376285 SPRR2EP22531 72 aa5.7□□□□□ -1.5
PCCA-202ENST00000376285 SPRR2BP35325 72 aa5.7□□□□□ -1.5
PCCA-202ENST00000376285 SPRR2AP35326 72 aa5.7□□□□□ -1.5
PCCA-202ENST00000376285 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.69□□□□□ -1.5
PCCA-202ENST00000376285 KRTAP9-6A0A140TA67 174 aa5.67□□□□□ -1.5
PCCA-202ENST00000376285 KRTAP6-3Q3LI67 103 aa5.62□□□□□ -1.51
PCCA-202ENST00000376285 KRTAP12-4P60329 112 aa5.52□□□□□ -1.53
PCCA-202ENST00000376285 SPRR2DP22532 72 aa5.47□□□□□ -1.53
PCCA-202ENST00000376285 KRTAP5-5Q701N2 237 aaPredicted RBP5.44□□□□□ -1.54
PCCA-202ENST00000376285 LCE3BQ5TA77 95 aa5.43□□□□□ -1.54
PCCA-202ENST00000376285 KRTAP6-1Q3LI64 71 aa5.41□□□□□ -1.54
PCCA-202ENST00000376285 MT1AP04731 61 aa5.4□□□□□ -1.55
PCCA-202ENST00000376285 SYNE1Q8NF91 8797 aaKnown RBP5.32□□□□□ -1.56
PCCA-202ENST00000376285 KRTAP4-9Q9BYQ8 210 aa5.3□□□□□ -1.56
PCCA-202ENST00000376285 KRTAP9-7A8MTY7 169 aa5.25□□□□□ -1.57
PCCA-202ENST00000376285 NEBP20929 6669 aa5.2□□□□□ -1.58
PCCA-202ENST00000376285 KRTAP9-4Q9BYQ2 154 aa5.11□□□□□ -1.59
PCCA-202ENST00000376285 LCE3DQ9BYE3 92 aa5.09□□□□□ -1.59
PCCA-202ENST00000376285 KRTAP5-4Q6L8H1 288 aa5.02□□□□□ -1.61
PCCA-202ENST00000376285 LCE3EQ5T5B0 92 aa5□□□□□ -1.61
PCCA-202ENST00000376285 PRM1P04553 51 aa4.92□□□□□ -1.62
PCCA-202ENST00000376285 KRTAP6-2Q3LI66 62 aa4.91□□□□□ -1.62
PCCA-202ENST00000376285 MT3P25713 68 aa4.86□□□□□ -1.63
PCCA-202ENST00000376285 LCE4AQ5TA78 99 aa4.81□□□□□ -1.64
PCCA-202ENST00000376285 KRTAP4-6Q9BYQ5 205 aa4.8□□□□□ -1.64
PCCA-202ENST00000376285 MT4P47944 62 aa4.78□□□□□ -1.64
PCCA-202ENST00000376285 KRTAP2-2Q9BYT5 123 aa4.77□□□□□ -1.65
PCCA-202ENST00000376285 OBSCNQ5VST9 7968 aa4.77□□□□□ -1.65
PCCA-202ENST00000376285 KRTAP20-2Q3LI61 65 aa4.69□□□□□ -1.66
PCCA-202ENST00000376285 KRTAP20-1Q3LI63 56 aa4.66□□□□□ -1.66
PCCA-202ENST00000376285 LCE1DQ5T752 114 aa4.63□□□□□ -1.67
PCCA-202ENST00000376285 KRTAP5-2Q701N4 177 aa4.61□□□□□ -1.67
PCCA-202ENST00000376285 HMCN1Q96RW7 5635 aa4.6□□□□□ -1.67
PCCA-202ENST00000376285 KRTAP5-3Q6L8H2 238 aa4.51□□□□□ -1.69
PCCA-202ENST00000376285 LCE1EQ5T753 118 aa4.12□□□□□ -1.75
PCCA-202ENST00000376285 MUC5ACP98088 5654 aa4.09□□□□□ -1.76
PCCA-202ENST00000376285 KRTAP4-11Q9BYQ6 195 aa3.98□□□□□ -1.77
PCCA-202ENST00000376285 KRTAP5-1Q6L8H4 278 aa3.96□□□□□ -1.78
PCCA-202ENST00000376285 LCE1BQ5T7P3 118 aa3.94□□□□□ -1.78
PCCA-202ENST00000376285 KRTAP5-10Q6L8G5 202 aa3.93□□□□□ -1.78
PCCA-202ENST00000376285 KRTAP4-2Q9BYR5 136 aa3.89□□□□□ -1.79
PCCA-202ENST00000376285 AHNAK2Q8IVF2 5795 aa3.87□□□□□ -1.79
PCCA-202ENST00000376285 LCE1CQ5T751 118 aa3.87□□□□□ -1.79
PCCA-202ENST00000376285 KRTAP5-8O75690 187 aa3.84□□□□□ -1.8
PCCA-202ENST00000376285 GPR98Q8WXG9 6306 aa3.83□□□□□ -1.8
PCCA-202ENST00000376285 KRTAP5-7Q6L8G8 165 aa3.75□□□□□ -1.81
PCCA-202ENST00000376285 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.64□□□□□ -1.83
PCCA-202ENST00000376285 LCE1FQ5T754 118 aa3.61□□□□□ -1.83
PCCA-202ENST00000376285 KRTAP21-2Q3LI59 83 aa3.52□□□□□ -1.85
PCCA-202ENST00000376285 KRTAP5-11Q6L8G4 156 aa3.38□□□□□ -1.87
PCCA-202ENST00000376285 KRTAP9-9Q9BYP9 154 aa3.36□□□□□ -1.87
PCCA-202ENST00000376285 MUC5BQ9HC84 5762 aaPredicted RBP3.3□□□□□ -1.88
PCCA-202ENST00000376285 KRTAP4-4Q9BYR3 166 aa3.18□□□□□ -1.9
PCCA-202ENST00000376285 KRTAP4-12Q9BQ66 201 aa3.17□□□□□ -1.9
PCCA-202ENST00000376285 KRTAP21-1Q3LI58 79 aa3.08□□□□□ -1.92
PCCA-202ENST00000376285 MUC19Q7Z5P9 8384 aa3.03□□□□□ -1.92
PCCA-202ENST00000376285 AHNAKQ09666 5890 aaKnown RBP2.99□□□□□ -1.93
PCCA-202ENST00000376285 PHGR1C9JFL3 82 aa2.91□□□□□ -1.94
PCCA-202ENST00000376285 MUC16Q8WXI7 14507 aa1.91□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 79.5 ms