RNA–Protein interactions for RNA: ENST00000376188.1

PPP1R3F-202, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 2,443 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-202ENST00000376188 MT1GP13640 62 aa6.28□□□□□ -1.4
PPP1R3F-202ENST00000376188 KRTAP2-3P0C7H8 128 aa6.26□□□□□ -1.41
PPP1R3F-202ENST00000376188 KRTAP2-4Q9BYR9 128 aa6.26□□□□□ -1.41
PPP1R3F-202ENST00000376188 KRTAP2-1Q9BYU5 128 aa6.26□□□□□ -1.41
PPP1R3F-202ENST00000376188 MT1MQ8N339 61 aa6.24□□□□□ -1.41
PPP1R3F-202ENST00000376188 MUC12Q9UKN1 5478 aa6.19□□□□□ -1.42
PPP1R3F-202ENST00000376188 KRTAP4-3Q9BYR4 195 aa6.17□□□□□ -1.42
PPP1R3F-202ENST00000376188 SPRR2FQ96RM1 72 aa6.16□□□□□ -1.42
PPP1R3F-202ENST00000376188 LCE5AQ5TCM9 118 aa6.11□□□□□ -1.43
PPP1R3F-202ENST00000376188 LOC100996750A0A140TA64 210 aa6.08□□□□□ -1.44
PPP1R3F-202ENST00000376188 MACF1Q9UPN3 7388 aaKnown RBP6.05□□□□□ -1.44
PPP1R3F-202ENST00000376188 KRTAP9-2Q9BYQ4 174 aa6.05□□□□□ -1.44
PPP1R3F-202ENST00000376188 CRCT1Q9UGL9 99 aa5.94□□□□□ -1.46
PPP1R3F-202ENST00000376188 KRTAP5-9P26371 169 aa5.88□□□□□ -1.47
PPP1R3F-202ENST00000376188 SYNE2Q8WXH0 6885 aaKnown RBP5.83□□□□□ -1.48
PPP1R3F-202ENST00000376188 LCE1AQ5T7P2 110 aa5.79□□□□□ -1.48
PPP1R3F-202ENST00000376188 DSTQ03001 7570 aaKnown RBP5.79□□□□□ -1.48
PPP1R3F-202ENST00000376188 MDN1Q9NU22 5596 aa5.71□□□□□ -1.49
PPP1R3F-202ENST00000376188 SPRR2EP22531 72 aa5.68□□□□□ -1.5
PPP1R3F-202ENST00000376188 SPRR2BP35325 72 aa5.68□□□□□ -1.5
PPP1R3F-202ENST00000376188 SPRR2AP35326 72 aa5.68□□□□□ -1.5
PPP1R3F-202ENST00000376188 MT1AP04731 61 aa5.6□□□□□ -1.51
PPP1R3F-202ENST00000376188 KRTAP6-1Q3LI64 71 aa5.57□□□□□ -1.52
PPP1R3F-202ENST00000376188 LCE3BQ5TA77 95 aa5.57□□□□□ -1.52
PPP1R3F-202ENST00000376188 KRTAP5-5Q701N2 237 aaPredicted RBP5.56□□□□□ -1.52
PPP1R3F-202ENST00000376188 KRTAP6-3Q3LI67 103 aa5.5□□□□□ -1.53
PPP1R3F-202ENST00000376188 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.46□□□□□ -1.53
PPP1R3F-202ENST00000376188 SPRR2DP22532 72 aa5.46□□□□□ -1.54
PPP1R3F-202ENST00000376188 KRTAP12-4P60329 112 aa5.45□□□□□ -1.54
PPP1R3F-202ENST00000376188 KRTAP4-9Q9BYQ8 210 aa5.35□□□□□ -1.55
PPP1R3F-202ENST00000376188 SYNE1Q8NF91 8797 aaKnown RBP5.34□□□□□ -1.55
PPP1R3F-202ENST00000376188 KRTAP9-6A0A140TA67 174 aa5.33□□□□□ -1.56
PPP1R3F-202ENST00000376188 KRTAP9-4Q9BYQ2 154 aa5.27□□□□□ -1.57
PPP1R3F-202ENST00000376188 LCE3DQ9BYE3 92 aa5.25□□□□□ -1.57
PPP1R3F-202ENST00000376188 LCE3EQ5T5B0 92 aa5.16□□□□□ -1.58
PPP1R3F-202ENST00000376188 NEBP20929 6669 aa5.08□□□□□ -1.6
PPP1R3F-202ENST00000376188 MT3P25713 68 aa5.05□□□□□ -1.6
PPP1R3F-202ENST00000376188 KRTAP6-2Q3LI66 62 aa5.04□□□□□ -1.6
PPP1R3F-202ENST00000376188 KRTAP5-4Q6L8H1 288 aa5.03□□□□□ -1.6
PPP1R3F-202ENST00000376188 KRTAP9-7A8MTY7 169 aa4.97□□□□□ -1.61
PPP1R3F-202ENST00000376188 LCE4AQ5TA78 99 aa4.82□□□□□ -1.64
PPP1R3F-202ENST00000376188 PRM1P04553 51 aa4.77□□□□□ -1.65
PPP1R3F-202ENST00000376188 KRTAP4-6Q9BYQ5 205 aa4.76□□□□□ -1.65
PPP1R3F-202ENST00000376188 MT4P47944 62 aa4.74□□□□□ -1.65
PPP1R3F-202ENST00000376188 KRTAP20-2Q3LI61 65 aa4.7□□□□□ -1.66
PPP1R3F-202ENST00000376188 OBSCNQ5VST9 7968 aa4.68□□□□□ -1.66
PPP1R3F-202ENST00000376188 KRTAP5-2Q701N4 177 aa4.66□□□□□ -1.66
PPP1R3F-202ENST00000376188 KRTAP2-2Q9BYT5 123 aa4.64□□□□□ -1.67
PPP1R3F-202ENST00000376188 KRTAP20-1Q3LI63 56 aa4.55□□□□□ -1.68
PPP1R3F-202ENST00000376188 LCE1DQ5T752 114 aa4.54□□□□□ -1.68
PPP1R3F-202ENST00000376188 HMCN1Q96RW7 5635 aa4.53□□□□□ -1.68
PPP1R3F-202ENST00000376188 KRTAP5-3Q6L8H2 238 aa4.5□□□□□ -1.69
PPP1R3F-202ENST00000376188 LCE1EQ5T753 118 aa4.24□□□□□ -1.73
PPP1R3F-202ENST00000376188 MUC5ACP98088 5654 aa4.15□□□□□ -1.75
PPP1R3F-202ENST00000376188 LCE1BQ5T7P3 118 aa4.03□□□□□ -1.76
PPP1R3F-202ENST00000376188 KRTAP5-10Q6L8G5 202 aa4□□□□□ -1.77
PPP1R3F-202ENST00000376188 LCE1CQ5T751 118 aa3.96□□□□□ -1.77
PPP1R3F-202ENST00000376188 KRTAP5-1Q6L8H4 278 aa3.96□□□□□ -1.78
PPP1R3F-202ENST00000376188 KRTAP4-2Q9BYR5 136 aa3.95□□□□□ -1.78
PPP1R3F-202ENST00000376188 KRTAP4-11Q9BYQ6 195 aa3.94□□□□□ -1.78
PPP1R3F-202ENST00000376188 KRTAP5-8O75690 187 aa3.78□□□□□ -1.81
PPP1R3F-202ENST00000376188 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.76□□□□□ -1.81
PPP1R3F-202ENST00000376188 KRTAP5-7Q6L8G8 165 aa3.75□□□□□ -1.81
PPP1R3F-202ENST00000376188 AHNAK2Q8IVF2 5795 aa3.75□□□□□ -1.81
PPP1R3F-202ENST00000376188 KRTAP21-2Q3LI59 83 aa3.63□□□□□ -1.83
PPP1R3F-202ENST00000376188 KRTAP5-11Q6L8G4 156 aa3.45□□□□□ -1.86
PPP1R3F-202ENST00000376188 KRTAP9-9Q9BYP9 154 aa3.28□□□□□ -1.88
PPP1R3F-202ENST00000376188 MUC5BQ9HC84 5762 aaPredicted RBP3.22□□□□□ -1.89
PPP1R3F-202ENST00000376188 KRTAP4-4Q9BYR3 166 aa3.22□□□□□ -1.89
PPP1R3F-202ENST00000376188 GPR98Q8WXG9 6306 aa3.19□□□□□ -1.9
PPP1R3F-202ENST00000376188 KRTAP4-12Q9BQ66 201 aa3.15□□□□□ -1.91
PPP1R3F-202ENST00000376188 LCE1FQ5T754 118 aa3.01□□□□□ -1.93
PPP1R3F-202ENST00000376188 KRTAP21-1Q3LI58 79 aa3□□□□□ -1.93
PPP1R3F-202ENST00000376188 PHGR1C9JFL3 82 aa2.96□□□□□ -1.94
PPP1R3F-202ENST00000376188 MUC19Q7Z5P9 8384 aa2.87□□□□□ -1.95
PPP1R3F-202ENST00000376188 AHNAKQ09666 5890 aaKnown RBP2.62□□□□□ -1.99
PPP1R3F-202ENST00000376188 MUC16Q8WXI7 14507 aa1.96□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 300.3 ms