RNA–Protein interactions for RNA: ENST00000373797.1

EPB41-205, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best) BASIC

Gene EPB41, Length 2,402 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-205ENST00000373797 MT1LQ93083 61 aa5.91□□□□□ -1.46
EPB41-205ENST00000373797 KRTAP19-4Q3LI73 84 aa5.85□□□□□ -1.47
EPB41-205ENST00000373797 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.82□□□□□ -1.48
EPB41-205ENST00000373797 FCGBPQ9Y6R7 5405 aaPredicted RBP5.71□□□□□ -1.5
EPB41-205ENST00000373797 KRTAP2-3P0C7H8 128 aa5.69□□□□□ -1.5
EPB41-205ENST00000373797 KRTAP2-4Q9BYR9 128 aa5.69□□□□□ -1.5
EPB41-205ENST00000373797 KRTAP2-1Q9BYU5 128 aa5.69□□□□□ -1.5
EPB41-205ENST00000373797 MUC12Q9UKN1 5478 aa5.63□□□□□ -1.51
EPB41-205ENST00000373797 KRTAP4-3Q9BYR4 195 aa5.61□□□□□ -1.51
EPB41-205ENST00000373797 KRTAP19-3Q7Z4W3 81 aa5.56□□□□□ -1.52
EPB41-205ENST00000373797 LOC100996750A0A140TA64 210 aa5.55□□□□□ -1.52
EPB41-205ENST00000373797 MT1MQ8N339 61 aa5.54□□□□□ -1.52
EPB41-205ENST00000373797 MT1GP13640 62 aa5.54□□□□□ -1.52
EPB41-205ENST00000373797 MACF1Q9UPN3 7388 aaKnown RBP5.42□□□□□ -1.54
EPB41-205ENST00000373797 LCE5AQ5TCM9 118 aa5.42□□□□□ -1.54
EPB41-205ENST00000373797 SPRR2FQ96RM1 72 aa5.4□□□□□ -1.54
EPB41-205ENST00000373797 DSTQ03001 7570 aaKnown RBP5.35□□□□□ -1.55
EPB41-205ENST00000373797 KRTAP6-3Q3LI67 103 aa5.3□□□□□ -1.56
EPB41-205ENST00000373797 SYNE2Q8WXH0 6885 aaKnown RBP5.27□□□□□ -1.57
EPB41-205ENST00000373797 NEBP20929 6669 aa5.18□□□□□ -1.58
EPB41-205ENST00000373797 KRTAP20-1Q3LI63 56 aa5.18□□□□□ -1.58
EPB41-205ENST00000373797 MDN1Q9NU22 5596 aa5.16□□□□□ -1.58
EPB41-205ENST00000373797 KRTAP5-9P26371 169 aa5.11□□□□□ -1.59
EPB41-205ENST00000373797 LCE1AQ5T7P2 110 aa5.09□□□□□ -1.59
EPB41-205ENST00000373797 LCE3BQ5TA77 95 aa5.03□□□□□ -1.6
EPB41-205ENST00000373797 KRTAP6-1Q3LI64 71 aa5.02□□□□□ -1.61
EPB41-205ENST00000373797 KRTAP12-4P60329 112 aa5.01□□□□□ -1.61
EPB41-205ENST00000373797 MT1AP04731 61 aa4.96□□□□□ -1.62
EPB41-205ENST00000373797 SPRR2EP22531 72 aa4.95□□□□□ -1.62
EPB41-205ENST00000373797 SPRR2BP35325 72 aa4.95□□□□□ -1.62
EPB41-205ENST00000373797 SPRR2AP35326 72 aa4.95□□□□□ -1.62
EPB41-205ENST00000373797 KRTAP5-5Q701N2 237 aaPredicted RBP4.95□□□□□ -1.62
EPB41-205ENST00000373797 KRTAP4-9Q9BYQ8 210 aa4.93□□□□□ -1.62
EPB41-205ENST00000373797 SYNE1Q8NF91 8797 aaKnown RBP4.9□□□□□ -1.63
EPB41-205ENST00000373797 SPRR2DP22532 72 aa4.73□□□□□ -1.65
EPB41-205ENST00000373797 LCE3DQ9BYE3 92 aa4.72□□□□□ -1.65
EPB41-205ENST00000373797 GPR98Q8WXG9 6306 aa4.71□□□□□ -1.66
EPB41-205ENST00000373797 KRTAP2-2Q9BYT5 123 aa4.7□□□□□ -1.66
EPB41-205ENST00000373797 KRTAP9-4Q9BYQ2 154 aa4.69□□□□□ -1.66
EPB41-205ENST00000373797 LCE3EQ5T5B0 92 aa4.64□□□□□ -1.67
EPB41-205ENST00000373797 KRTAP6-2Q3LI66 62 aa4.51□□□□□ -1.69
EPB41-205ENST00000373797 PRM1P04553 51 aa4.45□□□□□ -1.7
EPB41-205ENST00000373797 MT3P25713 68 aa4.45□□□□□ -1.7
EPB41-205ENST00000373797 KRTAP5-4Q6L8H1 288 aa4.41□□□□□ -1.7
EPB41-205ENST00000373797 OBSCNQ5VST9 7968 aa4.37□□□□□ -1.71
EPB41-205ENST00000373797 KRTAP4-6Q9BYQ5 205 aa4.25□□□□□ -1.73
EPB41-205ENST00000373797 MT4P47944 62 aa4.18□□□□□ -1.74
EPB41-205ENST00000373797 KRTAP20-2Q3LI61 65 aa4.12□□□□□ -1.75
EPB41-205ENST00000373797 LCE4AQ5TA78 99 aa4.12□□□□□ -1.75
EPB41-205ENST00000373797 KRTAP5-2Q701N4 177 aa4.1□□□□□ -1.75
EPB41-205ENST00000373797 KRTAP5-10Q6L8G5 202 aa4.09□□□□□ -1.76
EPB41-205ENST00000373797 AHNAK2Q8IVF2 5795 aa4.08□□□□□ -1.76
EPB41-205ENST00000373797 KRTAP5-7Q6L8G8 165 aa4.08□□□□□ -1.76
EPB41-205ENST00000373797 HMCN1Q96RW7 5635 aa4.02□□□□□ -1.77
EPB41-205ENST00000373797 LCE1DQ5T752 114 aa3.97□□□□□ -1.77
EPB41-205ENST00000373797 KRTAP5-3Q6L8H2 238 aa3.95□□□□□ -1.78
EPB41-205ENST00000373797 MUC5ACP98088 5654 aa3.75□□□□□ -1.81
EPB41-205ENST00000373797 AHNAKQ09666 5890 aaKnown RBP3.7□□□□□ -1.82
EPB41-205ENST00000373797 LCE1EQ5T753 118 aa3.7□□□□□ -1.82
EPB41-205ENST00000373797 MUC5BQ9HC84 5762 aaPredicted RBP3.6□□□□□ -1.83
EPB41-205ENST00000373797 LCE1BQ5T7P3 118 aa3.6□□□□□ -1.83
EPB41-205ENST00000373797 KRTAP4-2Q9BYR5 136 aa3.51□□□□□ -1.85
EPB41-205ENST00000373797 KRTAP5-1Q6L8H4 278 aa3.51□□□□□ -1.85
EPB41-205ENST00000373797 LCE1CQ5T751 118 aa3.49□□□□□ -1.85
EPB41-205ENST00000373797 KRTAP4-11Q9BYQ6 195 aa3.43□□□□□ -1.86
EPB41-205ENST00000373797 KRTAP5-8O75690 187 aa3.3□□□□□ -1.88
EPB41-205ENST00000373797 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.3□□□□□ -1.88
EPB41-205ENST00000373797 KRTAP21-2Q3LI59 83 aa3.26□□□□□ -1.89
EPB41-205ENST00000373797 KRTAP9-9Q9BYP9 154 aa3.21□□□□□ -1.9
EPB41-205ENST00000373797 KRTAP5-11Q6L8G4 156 aa3□□□□□ -1.93
EPB41-205ENST00000373797 KRTAP4-4Q9BYR3 166 aa2.95□□□□□ -1.94
EPB41-205ENST00000373797 KRTAP21-1Q3LI58 79 aa2.84□□□□□ -1.95
EPB41-205ENST00000373797 KRTAP4-12Q9BQ66 201 aa2.84□□□□□ -1.95
EPB41-205ENST00000373797 MUC19Q7Z5P9 8384 aa2.7□□□□□ -1.98
EPB41-205ENST00000373797 PHGR1C9JFL3 82 aa2.6□□□□□ -1.99
EPB41-205ENST00000373797 LCE1FQ5T754 118 aa2.49□□□□□ -2.01
EPB41-205ENST00000373797 MUC16Q8WXI7 14507 aa1.72□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 14.2 ms